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The map label for this gene is frr [H]

Identifier: 71893886

GI number: 71893886

Start: 693290

End: 693814

Strand: Reverse

Name: frr [H]

Synonym: MHJ_0535

Alternate gene names: 71893886

Gene position: 693814-693290 (Counterclockwise)

Preceding gene: 71893887

Following gene: 71893885

Centisome position: 77.31

GC content: 29.52

Gene sequence:

>525_bases
ATCTTGATTGAAAAAGCTCAAGATGTTTTTTCCTATCTTGAAAAAAGTTTTCAGAAAGTAACTATTGGAGCTCCAAATCC
ACAGTTAATTTCTTATATTAAAGTAAATTTTTATGATGTTTTAACCCCAATTAACGAAATCGCTTCAATTTCTGCTCCAC
TTCCATTACAACTTTTAGTAAAACCTTATGAAACTAAGTATGTAAAAGAAATTGCAAGCGCAATTGTAGCTGCAAAAATT
GATGCCCAAGTTCAAAAAGAAGCAAATCAAGTTCGACTAATTTTTCCAGAACCAACTCACCAAAAACGCCAAGAAGCAAT
TCATAAACTTAAAAAAATTCACGAGGAAGGCAAAGTAAGAATGCGTCTGATCCGACAAGATATTAACAAACTGATAAAAA
AAGAGGAATTCTCTGAGGATTTAGAAAAAGATTATCTTGGTCAAGTTCAGAAAAATATTAATTCTGAAATAGAAAAAATT
GATCAACTTTTTGATAAAAAAGTAAAAGCAATTCAAACAATTTAA

Upstream 100 bases:

>100_bases
AGAAAAAAATAGCATTTCTAAATTAATCAAAAGACAAATTAAACACACGGAGGTTTATTAGATAATGAAGAACGAAATTG
AATTTAGTTTTTATAAAAAC

Downstream 100 bases:

>100_bases
AATGAGCCTATCCTGGCCTAAAAAATTACCAGCTGATTTTTTTATCAGGTTTTTAGTTGCTTTTTTAGTTTTAGTAGTTG
TTTTCCCGGCTTTATTTATT

Product: ribosome recycling factor

Products: NA

Alternate protein names: RRF; Ribosome-releasing factor [H]

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MLIEKAQDVFSYLEKSFQKVTIGAPNPQLISYIKVNFYDVLTPINEIASISAPLPLQLLVKPYETKYVKEIASAIVAAKI
DAQVQKEANQVRLIFPEPTHQKRQEAIHKLKKIHEEGKVRMRLIRQDINKLIKKEEFSEDLEKDYLGQVQKNINSEIEKI
DQLFDKKVKAIQTI

Sequences:

>Translated_174_residues
MLIEKAQDVFSYLEKSFQKVTIGAPNPQLISYIKVNFYDVLTPINEIASISAPLPLQLLVKPYETKYVKEIASAIVAAKI
DAQVQKEANQVRLIFPEPTHQKRQEAIHKLKKIHEEGKVRMRLIRQDINKLIKKEEFSEDLEKDYLGQVQKNINSEIEKI
DQLFDKKVKAIQTI
>Mature_174_residues
MLIEKAQDVFSYLEKSFQKVTIGAPNPQLISYIKVNFYDVLTPINEIASISAPLPLQLLVKPYETKYVKEIASAIVAAKI
DAQVQKEANQVRLIFPEPTHQKRQEAIHKLKKIHEEGKVRMRLIRQDINKLIKKEEFSEDLEKDYLGQVQKNINSEIEKI
DQLFDKKVKAIQTI

Specific function: Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another [H]

COG id: COG0233

COG function: function code J; Ribosome recycling factor

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RRF family [H]

Homologues:

Organism=Escherichia coli, GI1786368, Length=161, Percent_Identity=25.4658385093168, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: 840 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002661
- InterPro:   IPR015998 [H]

Pfam domain/function: PF01765 RRF [H]

EC number: NA

Molecular weight: Translated: 20129; Mature: 20129

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIEKAQDVFSYLEKSFQKVTIGAPNPQLISYIKVNFYDVLTPINEIASISAPLPLQLLV
CCCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
KPYETKYVKEIASAIVAAKIDAQVQKEANQVRLIFPEPTHQKRQEAIHKLKKIHEEGKVR
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
MRLIRQDINKLIKKEEFSEDLEKDYLGQVQKNINSEIEKIDQLFDKKVKAIQTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLIEKAQDVFSYLEKSFQKVTIGAPNPQLISYIKVNFYDVLTPINEIASISAPLPLQLLV
CCCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
KPYETKYVKEIASAIVAAKIDAQVQKEANQVRLIFPEPTHQKRQEAIHKLKKIHEEGKVR
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
MRLIRQDINKLIKKEEFSEDLEKDYLGQVQKNINSEIEKIDQLFDKKVKAIQTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11353084 [H]