| Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
|---|---|
| Accession | NC_007295 |
| Length | 897,405 |
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The map label for this gene is 71893828
Identifier: 71893828
GI number: 71893828
Start: 603969
End: 606119
Strand: Reverse
Name: 71893828
Synonym: MHJ_0477
Alternate gene names: NA
Gene position: 606119-603969 (Counterclockwise)
Preceding gene: 71893829
Following gene: 71893827
Centisome position: 67.54
GC content: 31.24
Gene sequence:
>2151_bases TTAACCTCAGCGATTAATTATTCCCAAAAGGAAATTATTAGTCAAGAAAAACCACAAACTGATAATGATAAAGGCCAGGC AGGCCAGTCAAATCAAGAAAAAAATGGGGAAAAAGATCAAAAAAAAGCTGATGCTGATCCAAAAAAAGATCCAACACCGA TCACTAATGAAGATCTTAAAAAAAATCAGGCTTGATGGGAAAGCAAAAAAGAGGAATTTATTGACCGTTTTATTGGGCAG GTTGATAATGATATTAAAGCAAAACTAGCCGATATTAATGCCAAAAATAAGGATAATGTCGAAGAAAGACTACAACAAAG TTTTTTTTGGATTCAACTACGTTATTATTTCCAGAAAAATCGTGAGGGGATCAAAAAAGATCCCCGCAAATATGGTTTGA ATATCATTAGCCCCTTTGCTTTTGCAAATAATTTAAAACTAAAACGTGGAGATGTCACTTTTGATAAGGAAAATTATCAA GGGCTTGAATGGGGAAATAACCAAAACGATGACTATGCAAAAATTCAAGGAGTAAAAACTGATAAAGTTTTGGATGTTCC TAATACTTTAAAAGGTCAAGAATTTGAGGAAAGGATCAAAACTTATTTTAAAGGACTAGAATCAGGTTATAAACAATATT TATTCAAAGAGGAAGAATTTCCGGTCTATAAAAAGAATTTTAATCTAAATCTTGACCGTGAAAGTATTGATGATAAAGAA AATATTTTATTAGCTTCAAAACCAATGGGCAAAGAAGGGGTATCCACCTGAAATGACTGGATCAAAAACTACTTTGAAAA ACAGTCGCTTTTACTGGATTTTTCTTTAAATCAACTGCCAAATCCGTCTTCTTCAAAATCAGAAATAGAACAAATTAATT TAGCAATTAAAAAAATTACCAAACAAAACCCCCCTCAAATCTCCGAAAAACCGGAATTTGAAGTCCGAATTGCTCCTGAT CTACCCCCAATTGTTGCTCCTGAATATACAAATTTGTCCGTAAGCGAGATTATAAATCTTTATAATTCAGCATCCCAAGA AAAAAAATCCGAGATTTTTTTCTTTTTAAACCCTTTAAATTCCCGTTTTAAATATAATATTGAATCTATTAGTGAAACAG ACGGGAAGATTAAAGCGCGGATTAAAATTACTGACTTTGTTAATAAAGTCCGCGAATCATCGGATAAGAAAAAATATGAA AAAGTTTATGAAAGTCTCCAATATGATGACTTTGAAGGCGCAAGTCCCTGGCAAAGACAGGCAATTACAACAAACTTATA CCATTCAAATTTAGGGGTTACAGCCGTAATTGATAATTTTTTTGAAACTGTTAATGTCAATGATCAATTTAGTTTTGACC AAATTCGCTATTATTCCCCTGGTTCACAAACAACAATTTATAATTTTTTCTATCTACTTACAAAAGTGTTTTATAATCAA GATTTTTTAGAAGCCCAGAAAAAAATGGCCCGAGAATATATAAATTCTTCGCTATCAAGTGTTTTTTCAGCTTCCCAGTT TCAGTTTTTATCTTATCTTAAAAAATCCGAGATCGATAATAATAAAGCTTGACTTCATTATTATTTAATTTATTTTATTA ATTTATATGTTCTTCAGGAAAAATTTAATAGGGCAAAACAAACAATTTCGGAATTAGATGGTAAAGCTGAGTCAAGTTCT GAAGCCGCCAAACAACTTGATGCGACTTTGGAAAAACTCAATCTAACTCGTGAAGATATTAACCGTTTTTTTGCACAGGC CCACGAAAAAATTGCCCTTTTTCATAATGAATCTTATAAATTAACCTCAAATTTGGTTAATTCATTTTTGAAAATGACAA AATTAGGTCGGGAAATCAATCAGTTAAGTCAAATTTTGGGCCAGATCGCCTATTTTGCTCAAAAAGATGAAAATAAAGAC CAAAACTCAGCAGGCCAAAGTCAAGACAGCGGAAATGCAGTTCAAAATTTTGCAGATTTAATTCAAGAATATAAGTTAGC AAATACCTCAAAATGACTTGAGGATAATCTTTTATACTTAATAATTGGGACAATTTCCGGAATTTTAATTACCTTAACCG TCTTTTTACGCCGAATTATTTATAAAAGAAAACAAAATTTAGTAAGTCAAAAAAATAAAGGAGATCAATAA
Upstream 100 bases:
>100_bases AGAACTGAGGTAAATTATGTATAAAAAACAAAAAAATAGAAAAAATAAGTTGATTTTTTCCCGATTTTTTCCATTTTTAA CTTTTTCCCCGCTTTTTTTC
Downstream 100 bases:
>100_bases TGGCATTAAAAGTTGCATCCGTTCTAGATTATGTAGTTCTTGTTAAAGGTGAGTATAACTGGCAGGAACAACAATTTTTT CAAGTAAAAGATAAACCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 716; Mature: 716
Protein sequence:
>716_residues MTSAINYSQKEIISQEKPQTDNDKGQAGQSNQEKNGEKDQKKADADPKKDPTPITNEDLKKNQAWWESKKEEFIDRFIGQ VDNDIKAKLADINAKNKDNVEERLQQSFFWIQLRYYFQKNREGIKKDPRKYGLNIISPFAFANNLKLKRGDVTFDKENYQ GLEWGNNQNDDYAKIQGVKTDKVLDVPNTLKGQEFEERIKTYFKGLESGYKQYLFKEEEFPVYKKNFNLNLDRESIDDKE NILLASKPMGKEGVSTWNDWIKNYFEKQSLLLDFSLNQLPNPSSSKSEIEQINLAIKKITKQNPPQISEKPEFEVRIAPD LPPIVAPEYTNLSVSEIINLYNSASQEKKSEIFFFLNPLNSRFKYNIESISETDGKIKARIKITDFVNKVRESSDKKKYE KVYESLQYDDFEGASPWQRQAITTNLYHSNLGVTAVIDNFFETVNVNDQFSFDQIRYYSPGSQTTIYNFFYLLTKVFYNQ DFLEAQKKMAREYINSSLSSVFSASQFQFLSYLKKSEIDNNKAWLHYYLIYFINLYVLQEKFNRAKQTISELDGKAESSS EAAKQLDATLEKLNLTREDINRFFAQAHEKIALFHNESYKLTSNLVNSFLKMTKLGREINQLSQILGQIAYFAQKDENKD QNSAGQSQDSGNAVQNFADLIQEYKLANTSKWLEDNLLYLIIGTISGILITLTVFLRRIIYKRKQNLVSQKNKGDQ
Sequences:
>Translated_716_residues LTSAINYSQKEIISQEKPQTDNDKGQAGQSNQEKNGEKDQKKADADPKKDPTPITNEDLKKNQA*WESKKEEFIDRFIGQ VDNDIKAKLADINAKNKDNVEERLQQSFFWIQLRYYFQKNREGIKKDPRKYGLNIISPFAFANNLKLKRGDVTFDKENYQ GLEWGNNQNDDYAKIQGVKTDKVLDVPNTLKGQEFEERIKTYFKGLESGYKQYLFKEEEFPVYKKNFNLNLDRESIDDKE NILLASKPMGKEGVST*NDWIKNYFEKQSLLLDFSLNQLPNPSSSKSEIEQINLAIKKITKQNPPQISEKPEFEVRIAPD LPPIVAPEYTNLSVSEIINLYNSASQEKKSEIFFFLNPLNSRFKYNIESISETDGKIKARIKITDFVNKVRESSDKKKYE KVYESLQYDDFEGASPWQRQAITTNLYHSNLGVTAVIDNFFETVNVNDQFSFDQIRYYSPGSQTTIYNFFYLLTKVFYNQ DFLEAQKKMAREYINSSLSSVFSASQFQFLSYLKKSEIDNNKA*LHYYLIYFINLYVLQEKFNRAKQTISELDGKAESSS EAAKQLDATLEKLNLTREDINRFFAQAHEKIALFHNESYKLTSNLVNSFLKMTKLGREINQLSQILGQIAYFAQKDENKD QNSAGQSQDSGNAVQNFADLIQEYKLANTSK*LEDNLLYLIIGTISGILITLTVFLRRIIYKRKQNLVSQKNKGDQ >Mature_716_residues LTSAINYSQKEIISQEKPQTDNDKGQAGQSNQEKNGEKDQKKADADPKKDPTPITNEDLKKNQA*WESKKEEFIDRFIGQ VDNDIKAKLADINAKNKDNVEERLQQSFFWIQLRYYFQKNREGIKKDPRKYGLNIISPFAFANNLKLKRGDVTFDKENYQ GLEWGNNQNDDYAKIQGVKTDKVLDVPNTLKGQEFEERIKTYFKGLESGYKQYLFKEEEFPVYKKNFNLNLDRESIDDKE NILLASKPMGKEGVST*NDWIKNYFEKQSLLLDFSLNQLPNPSSSKSEIEQINLAIKKITKQNPPQISEKPEFEVRIAPD LPPIVAPEYTNLSVSEIINLYNSASQEKKSEIFFFLNPLNSRFKYNIESISETDGKIKARIKITDFVNKVRESSDKKKYE KVYESLQYDDFEGASPWQRQAITTNLYHSNLGVTAVIDNFFETVNVNDQFSFDQIRYYSPGSQTTIYNFFYLLTKVFYNQ DFLEAQKKMAREYINSSLSSVFSASQFQFLSYLKKSEIDNNKA*LHYYLIYFINLYVLQEKFNRAKQTISELDGKAESSS EAAKQLDATLEKLNLTREDINRFFAQAHEKIALFHNESYKLTSNLVNSFLKMTKLGREINQLSQILGQIAYFAQKDENKD QNSAGQSQDSGNAVQNFADLIQEYKLANTSK*LEDNLLYLIIGTISGILITLTVFLRRIIYKRKQNLVSQKNKGDQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82436; Mature: 82436
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure LTSAINYSQKEIISQEKPQTDNDKGQAGQSNQEKNGEKDQKKADADPKKDPTPITNEDLK CCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHH KNQAWESKKEEFIDRFIGQVDNDIKAKLADINAKNKDNVEERLQQSFFWIQLRYYFQKNR HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC EGIKKDPRKYGLNIISPFAFANNLKLKRGDVTFDKENYQGLEWGNNQNDDYAKIQGVKTD CCHHCCHHHHCCCHHCHHHHHCCCEEECCCEEECCCCCCCCCCCCCCCCCHHHEECCCCC KVLDVPNTLKGQEFEERIKTYFKGLESGYKQYLFKEEEFPVYKKNFNLNLDRESIDDKEN CEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHCCCCCC ILLASKPMGKEGVSTNDWIKNYFEKQSLLLDFSLNQLPNPSSSKSEIEQINLAIKKITKQ EEEECCCCCCCCCCHHHHHHHHHHHHHHEEEEEHHCCCCCCCCHHHHHHHHHHHHHHHCC NPPQISEKPEFEVRIAPDLPPIVAPEYTNLSVSEIINLYNSASQEKKSEIFFFLNPLNSR CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCC FKYNIESISETDGKIKARIKITDFVNKVRESSDKKKYEKVYESLQYDDFEGASPWQRQAI CEECHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH TTNLYHSNLGVTAVIDNFFETVNVNDQFSFDQIRYYSPGSQTTIYNFFYLLTKVFYNQDF HHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCHHH LEAQKKMAREYINSSLSSVFSASQFQFLSYLKKSEIDNNKALHYYLIYFINLYVLQEKFN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH RAKQTISELDGKAESSSEAAKQLDATLEKLNLTREDINRFFAQAHEKIALFHNESYKLTS HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEECCCHHHHH NLVNSFLKMTKLGREINQLSQILGQIAYFAQKDENKDQNSAGQSQDSGNAVQNFADLIQE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH YKLANTSKLEDNLLYLIIGTISGILITLTVFLRRIIYKRKQNLVSQKNKGDQ HHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA