| Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
|---|---|
| Accession | NC_007295 |
| Length | 897,405 |
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The map label for this gene is 71893798
Identifier: 71893798
GI number: 71893798
Start: 564349
End: 565089
Strand: Reverse
Name: 71893798
Synonym: MHJ_0447
Alternate gene names: NA
Gene position: 565089-564349 (Counterclockwise)
Preceding gene: 71893799
Following gene: 71893797
Centisome position: 62.97
GC content: 33.47
Gene sequence:
>741_bases ATTTTTAAAGAACAACTTGAACTCTTAAAACAAAAATATCAATTTGATCTTGTAATTGTCCAGGCTGAAAATATCACTGG CAGAAAAGGTCTTAATAAAAAAGACTATTTATATTTAAAAAAATTAGGGGTTGATATTTTTACAGTCGGCAATCATGTCT GATCAAATCCAGAAATCAACCTAATTATTAACAACGCCGATATAGTCAGACCCTTAAATATTGCCCCCGAATATCAAGGA AATGGCTCAACGGTAATTGAAAAAAACGGCAAAACCTTCCGGATTACCTCACTTCTTGGAGTTGCTTTTAATAAACTAGT CAAGCCTTGGAATCATCAGTTTGCCGATAATTTTTTTGATGCAATCGATCAAGTTCTTGCCCAGGATAAAGCTGATTTTC ATATAGTTGATTTTCATGCTGAGACTACTAGTGAAAAAAATACCTTGGCAATCTACCTTAACGGGAAAATTAATGCACTT TTAGGCACTCATACTCATGTCCAAACTGCAGATGCCCGAAAATTAGCACTGGGAACCTTATTTATCACAGATGTCGGGAT GACCGGACCAGCAAATGATGCAATTGGTGTGAGTTTTCTTGATGTCTATAAAAAAATTCGCTATCAAAAAAATGCAAGAT TTCGGATTTCAGCAAATAGTTGTCAATTTAATGCAGTAATTTTAGAGTTAAATCAACAATTAGAAAAGCAGAAAATTTTC CCCATTAATATTTATAAGTAA
Upstream 100 bases:
>100_bases CATCTTTTTACTTAATTTGCAAAGGTAAAAAGTTTAGCCCAAGATGAAATCTGCTACTGTATTATTCGTTGGTGATATTT TTGGTGCCCCTGGAATTGAA
Downstream 100 bases:
>100_bases AAAATCTCGTATTAAGTCAAAACTTATTAGGAAATCAGACCAAAAAATCTAAATTTATTTAGTTAGGAAGCAATTAAATT AATAAAAAACATAAAAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MFKEQLELLKQKYQFDLVIVQAENITGRKGLNKKDYLYLKKLGVDIFTVGNHVWSNPEINLIINNADIVRPLNIAPEYQG NGSTVIEKNGKTFRITSLLGVAFNKLVKPWNHQFADNFFDAIDQVLAQDKADFHIVDFHAETTSEKNTLAIYLNGKINAL LGTHTHVQTADARKLALGTLFITDVGMTGPANDAIGVSFLDVYKKIRYQKNARFRISANSCQFNAVILELNQQLEKQKIF PINIYK
Sequences:
>Translated_246_residues MFKEQLELLKQKYQFDLVIVQAENITGRKGLNKKDYLYLKKLGVDIFTVGNHV*SNPEINLIINNADIVRPLNIAPEYQG NGSTVIEKNGKTFRITSLLGVAFNKLVKPWNHQFADNFFDAIDQVLAQDKADFHIVDFHAETTSEKNTLAIYLNGKINAL LGTHTHVQTADARKLALGTLFITDVGMTGPANDAIGVSFLDVYKKIRYQKNARFRISANSCQFNAVILELNQQLEKQKIF PINIYK >Mature_246_residues MFKEQLELLKQKYQFDLVIVQAENITGRKGLNKKDYLYLKKLGVDIFTVGNHV*SNPEINLIINNADIVRPLNIAPEYQG NGSTVIEKNGKTFRITSLLGVAFNKLVKPWNHQFADNFFDAIDQVLAQDKADFHIVDFHAETTSEKNTLAIYLNGKINAL LGTHTHVQTADARKLALGTLFITDVGMTGPANDAIGVSFLDVYKKIRYQKNARFRISANSCQFNAVILELNQQLEKQKIF PINIYK
Specific function: Unknown
COG id: COG1692
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005235 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27669; Mature: 27669
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKEQLELLKQKYQFDLVIVQAENITGRKGLNKKDYLYLKKLGVDIFTVGNHVSNPEINL CCHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCEEEEEHHCCEEEEECCCCCCCEEEE IINNADIVRPLNIAPEYQGNGSTVIEKNGKTFRITSLLGVAFNKLVKPWNHQFADNFFDA EECCCCEEEECCCCCCCCCCCCEEEECCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHH IDQVLAQDKADFHIVDFHAETTSEKNTLAIYLNGKINALLGTHTHVQTADARKLALGTLF HHHHHHCCCCCEEEEEEEECCCCCCCEEEEEECCEEEEEEECCCEEECCCCHHEEEEEEE ITDVGMTGPANDAIGVSFLDVYKKIRYQKNARFRISANSCQFNAVILELNQQLEKQKIFP EEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEEHHHHHHCCCCE INIYK EEEEC >Mature Secondary Structure MFKEQLELLKQKYQFDLVIVQAENITGRKGLNKKDYLYLKKLGVDIFTVGNHVSNPEINL CCHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCEEEEEHHCCEEEEECCCCCCCEEEE IINNADIVRPLNIAPEYQGNGSTVIEKNGKTFRITSLLGVAFNKLVKPWNHQFADNFFDA EECCCCEEEECCCCCCCCCCCCEEEECCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHH IDQVLAQDKADFHIVDFHAETTSEKNTLAIYLNGKINALLGTHTHVQTADARKLALGTLF HHHHHHCCCCCEEEEEEEECCCCCCCEEEEEECCEEEEEEECCCEEECCCCHHEEEEEEE ITDVGMTGPANDAIGVSFLDVYKKIRYQKNARFRISANSCQFNAVILELNQQLEKQKIFP EEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEEHHHHHHCCCCE INIYK EEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8948633 [H]