Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
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Accession | NC_007295 |
Length | 897,405 |
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The map label for this gene is 71893748
Identifier: 71893748
GI number: 71893748
Start: 484167
End: 484904
Strand: Reverse
Name: 71893748
Synonym: MHJ_0396
Alternate gene names: NA
Gene position: 484904-484167 (Counterclockwise)
Preceding gene: 71893749
Following gene: 71893747
Centisome position: 54.03
GC content: 21.95
Gene sequence:
>738_bases ATGAATAAAAAGAGGAAAATATCTTTACAAATTCGCAAAATTTTATCAAGTGTTGTCTTAATTCCAACAATAGGATTGTT TACTTTAGCATGCAAAAATAAAGAGTTTTTAAACCAAGAAAAAGATAATTTTTTTGATAATAATGTAGTAAAAAAAATTA ATGATAATTTTGAAGAATATCAAAGAAAATATTTTATGAATTCATATTGACTTCATAGAGAAACACTGAAATATTTAGAC AAAGTTGAGCAACCATTTCCATCCGAATTTTACTTTAAATCAAATTTAAGTGAAAATGAACAAAGAATTCGAAATGAAAA TCAACAAAAATTTGATAATTATTTTAAAACAAATAAAGCTACTAATTACACACTAAAAACCAAAGAAGAATTTGAAAATT TAGATTCAAATATTTTAAAACCTATTTTTAAAAATTATTTAAGTAAATTTTTTCCTAATCAAAATATAGAACAAATTTTT GATCAATATAATTTATATTATTTTGTAAAAGAAAGTGAAATATATTCATTTGGTCTTTCAAAAACAGATTTAGGTTGATG ATGATTTGATTCATTAAAATTCAATAAGCTATATTTTATAGAGCCTCCACAACGTCCCATAGTTCATACTATGGTTCCAT ATACAGGCGCACAAATTAATATTGTTGCTTTTAAAAAATCTGAAAATATAGAATTTTTTGAAAGTAGCAACATAGATACC ATTATGAAATTGATTTAA
Upstream 100 bases:
>100_bases ATTTATAGATATATAGTTAAAAAATACAAAAGTTCTTTATTTGAAAATTCAGTAGATGATTCTATTGCAGTGACACATAC TGTATTTAAGGAAAACTAAT
Downstream 100 bases:
>100_bases ATATAATTTCGTATTTTCTAAATTAGCTAGAATTAAAAATTTAAAAAATAAATTTAGTAGTAAGTCAATTTGTTTGAAAT ATTACAATTCTAGATTTACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MNKKRKISLQIRKILSSVVLIPTIGLFTLACKNKEFLNQEKDNFFDNNVVKKINDNFEEYQRKYFMNSYWLHRETLKYLD KVEQPFPSEFYFKSNLSENEQRIRNENQQKFDNYFKTNKATNYTLKTKEEFENLDSNILKPIFKNYLSKFFPNQNIEQIF DQYNLYYFVKESEIYSFGLSKTDLGWWWFDSLKFNKLYFIEPPQRPIVHTMVPYTGAQINIVAFKKSENIEFFESSNIDT IMKLI
Sequences:
>Translated_245_residues MNKKRKISLQIRKILSSVVLIPTIGLFTLACKNKEFLNQEKDNFFDNNVVKKINDNFEEYQRKYFMNSY*LHRETLKYLD KVEQPFPSEFYFKSNLSENEQRIRNENQQKFDNYFKTNKATNYTLKTKEEFENLDSNILKPIFKNYLSKFFPNQNIEQIF DQYNLYYFVKESEIYSFGLSKTDLG***FDSLKFNKLYFIEPPQRPIVHTMVPYTGAQINIVAFKKSENIEFFESSNIDT IMKLI >Mature_245_residues MNKKRKISLQIRKILSSVVLIPTIGLFTLACKNKEFLNQEKDNFFDNNVVKKINDNFEEYQRKYFMNSY*LHRETLKYLD KVEQPFPSEFYFKSNLSENEQRIRNENQQKFDNYFKTNKATNYTLKTKEEFENLDSNILKPIFKNYLSKFFPNQNIEQIF DQYNLYYFVKESEIYSFGLSKTDLG***FDSLKFNKLYFIEPPQRPIVHTMVPYTGAQINIVAFKKSENIEFFESSNIDT IMKLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28895; Mature: 28895
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKRKISLQIRKILSSVVLIPTIGLFTLACKNKEFLNQEKDNFFDNNVVKKINDNFEEY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHCCHHCHHHHHHHCCCHHHH QRKYFMNSYLHRETLKYLDKVEQPFPSEFYFKSNLSENEQRIRNENQQKFDNYFKTNKAT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHCCHHHHHHHHHHCCCCC NYTLKTKEEFENLDSNILKPIFKNYLSKFFPNQNIEQIFDQYNLYYFVKESEIYSFGLSK CEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEECCCEEECCCCC TDLGFDSLKFNKLYFIEPPQRPIVHTMVPYTGAQINIVAFKKSENIEFFESSNIDTIMKL CCCCCCCEECCEEEEECCCCCCCEEEECCCCCCEEEEEEEECCCCCEEECCCCHHHHHHH I C >Mature Secondary Structure MNKKRKISLQIRKILSSVVLIPTIGLFTLACKNKEFLNQEKDNFFDNNVVKKINDNFEEY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHCCHHCHHHHHHHCCCHHHH QRKYFMNSYLHRETLKYLDKVEQPFPSEFYFKSNLSENEQRIRNENQQKFDNYFKTNKAT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHCCHHHHHHHHHHCCCCC NYTLKTKEEFENLDSNILKPIFKNYLSKFFPNQNIEQIFDQYNLYYFVKESEIYSFGLSK CEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEECCCEEECCCCC TDLGFDSLKFNKLYFIEPPQRPIVHTMVPYTGAQINIVAFKKSENIEFFESSNIDTIMKL CCCCCCCEECCEEEEECCCCCCCEEEECCCCCCEEEEEEEECCCCCEEECCCCHHHHHHH I C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA