Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
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Accession | NC_007295 |
Length | 897,405 |
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The map label for this gene is 71893747
Identifier: 71893747
GI number: 71893747
Start: 483185
End: 483976
Strand: Reverse
Name: 71893747
Synonym: MHJ_0395
Alternate gene names: NA
Gene position: 483976-483185 (Counterclockwise)
Preceding gene: 71893748
Following gene: 71893746
Centisome position: 53.93
GC content: 23.86
Gene sequence:
>792_bases ATGTCTAAAACGAAGAAAATTTTATTACTTTTATCAACAATTATTTCTGTTTCTATATCTGCTGTTTCCATTTATTATTT AAGTTTATATTATAAACTTGATCAACCCAACTATGTTAATCTATCAGATGAAGAAGAAAAACAGTTAATCTATTTAAAAA ATTCATTTAATGAATTTATATTTAAAAAAATTCAAAATAATTTTAATAAATATCAAAAAGAATATTTCATGAGTACTTAT TGAGTTAATCAAGATACTTTAGAAAGTAGTGACCAACTTGATTCTCACATCCAAAAAACAGAATCCAATACAGATGAAGA AAAAAATAAAATTCAAGAAAACATAGATAAATATTCAGATTTTTTTAACAAAAATAAAGAAATCCCTCGTACATTAACTT TAAAAACAGAGTTTGATAATTTAGATTCGAACATTGTAAAACCTGTATTTGAAAAATATTTAACAAAATTTTTTCCTAAT CAAAGTGTAGAGCAAGTACTACAAACATATAACTTATATTATTTTGTAAAGAATAGCTCTTTCTCGAATTTCACATTAAG CTCTTCTAGAATGGGTTGATGGAATCTAGATTTTCTTAAAGATAAAAAATTATATTTTGTAAATTATTATCCATGACCGC AAGAATCAAGCGATACCAATAATGGTGCAACTATAAGTATAATAGCCTTTAAAAAAGAAGACAATATTGCCTTTAATAAT GAAACAGATTGAAAAACTCTTTTACAAGAATGGAAGGGGCTACCTTGAGACAAAAAAACAAATGAAAATTAA
Upstream 100 bases:
>100_bases TAGATTTACTAATTTGCTTCAAAAATGAAGGAAAATGCTAATTTAAATATATTTTTTCAATAAATTAAAAAATTTGTACA CTGTAAGAAAGGATTAAAAT
Downstream 100 bases:
>100_bases AGTTTTCTTGATTTGCTAATGATATTAGCCAAGAAAAAAGAACTAAAATAACAAAACCTATCAAAATCTCACTGTTAGTT TTATGATCTTATTTGATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MSKTKKILLLLSTIISVSISAVSIYYLSLYYKLDQPNYVNLSDEEEKQLIYLKNSFNEFIFKKIQNNFNKYQKEYFMSTY WVNQDTLESSDQLDSHIQKTESNTDEEKNKIQENIDKYSDFFNKNKEIPRTLTLKTEFDNLDSNIVKPVFEKYLTKFFPN QSVEQVLQTYNLYYFVKNSSFSNFTLSSSRMGWWNLDFLKDKKLYFVNYYPWPQESSDTNNGATISIIAFKKEDNIAFNN ETDWKTLLQEWKGLPWDKKTNEN
Sequences:
>Translated_263_residues MSKTKKILLLLSTIISVSISAVSIYYLSLYYKLDQPNYVNLSDEEEKQLIYLKNSFNEFIFKKIQNNFNKYQKEYFMSTY *VNQDTLESSDQLDSHIQKTESNTDEEKNKIQENIDKYSDFFNKNKEIPRTLTLKTEFDNLDSNIVKPVFEKYLTKFFPN QSVEQVLQTYNLYYFVKNSSFSNFTLSSSRMG*WNLDFLKDKKLYFVNYYP*PQESSDTNNGATISIIAFKKEDNIAFNN ETD*KTLLQEWKGLP*DKKTNEN >Mature_262_residues SKTKKILLLLSTIISVSISAVSIYYLSLYYKLDQPNYVNLSDEEEKQLIYLKNSFNEFIFKKIQNNFNKYQKEYFMSTY* VNQDTLESSDQLDSHIQKTESNTDEEKNKIQENIDKYSDFFNKNKEIPRTLTLKTEFDNLDSNIVKPVFEKYLTKFFPNQ SVEQVLQTYNLYYFVKNSSFSNFTLSSSRMG*WNLDFLKDKKLYFVNYYP*PQESSDTNNGATISIIAFKKEDNIAFNNE TD*KTLLQEWKGLP*DKKTNEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30429; Mature: 30298
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTKKILLLLSTIISVSISAVSIYYLSLYYKLDQPNYVNLSDEEEKQLIYLKNSFNEFI CCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCEECCCCCCCCEEEEEHHHHHHHH FKKIQNNFNKYQKEYFMSTYVNQDTLESSDQLDSHIQKTESNTDEEKNKIQENIDKYSDF HHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FNKNKEIPRTLTLKTEFDNLDSNIVKPVFEKYLTKFFPNQSVEQVLQTYNLYYFVKNSSF HHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEECCCC SNFTLSSSRMGWNLDFLKDKKLYFVNYYPPQESSDTNNGATISIIAFKKEDNIAFNNETD CCEEEECCCCCCCEEEEECCEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCEEECCCCH KTLLQEWKGLPDKKTNEN HHHHHHHCCCCCCCCCCC >Mature Secondary Structure SKTKKILLLLSTIISVSISAVSIYYLSLYYKLDQPNYVNLSDEEEKQLIYLKNSFNEFI CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCEECCCCCCCCEEEEEHHHHHHHH FKKIQNNFNKYQKEYFMSTYVNQDTLESSDQLDSHIQKTESNTDEEKNKIQENIDKYSDF HHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FNKNKEIPRTLTLKTEFDNLDSNIVKPVFEKYLTKFFPNQSVEQVLQTYNLYYFVKNSSF HHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEECCCC SNFTLSSSRMGWNLDFLKDKKLYFVNYYPPQESSDTNNGATISIIAFKKEDNIAFNNETD CCEEEECCCCCCCEEEEECCEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCEEECCCCH KTLLQEWKGLPDKKTNEN HHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA