Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
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Accession | NC_007295 |
Length | 897,405 |
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The map label for this gene is insK [C]
Identifier: 71893737
GI number: 71893737
Start: 478192
End: 478419
Strand: Reverse
Name: insK [C]
Synonym: MHJ_0385
Alternate gene names: 71893737
Gene position: 478419-478192 (Counterclockwise)
Preceding gene: 71893740
Following gene: 71893734
Centisome position: 53.31
GC content: 23.25
Gene sequence:
>228_bases ATGTCTCGAAAAGGAAATTGTTTAGATAATAGCGTTATTGAATTGTTTTTTGGGACATTAAAAAGAGAATGTTTTTATGG TCGCGAAAAAGAATTTTTAACTTTTAAACAACTTTACAAAGCAATTGCAAATTATATTTATTATTACAATCACAAACGAA TTAAAGACAAAATAAAATGAATGTCTCCTATTAAATTTAGGGAAACATTCATTTCAAATTATAATTAA
Upstream 100 bases:
>100_bases CAAAAATCTTGAAGGTTTAATTTTTCACAGTGATCAAGGTTAACAATATCAACATAGACAATTTTCAGAAAAATTAAAAC AAAAAGGAATAATTCAGTCT
Downstream 100 bases:
>100_bases TTAAAACACTCAAAAATTTTTTTCAAGAAGAGGGTATCACCTCAAAACTAATAGTATTTTATTTATTTGAAAATGATGTG TAAATTTTAATTATTTAAAC
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MSRKGNCLDNSVIELFFGTLKRECFYGREKEFLTFKQLYKAIANYIYYYNHKRIKDKIKWMSPIKFRETFISNYN
Sequences:
>Translated_75_residues MSRKGNCLDNSVIELFFGTLKRECFYGREKEFLTFKQLYKAIANYIYYYNHKRIKDKIK*MSPIKFRETFISNYN >Mature_74_residues SRKGNCLDNSVIELFFGTLKRECFYGREKEFLTFKQLYKAIANYIYYYNHKRIKDKIK*MSPIKFRETFISNYN
Specific function: Involved in the transposition of the insertion sequence is150 [C]
COG id: COG2801
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
Organism=Escherichia coli, GI1789981, Length=67, Percent_Identity=56.7164179104478, Blast_Score=76, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001584 - InterPro: IPR012337 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 9049; Mature: 8917
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKGNCLDNSVIELFFGTLKRECFYGREKEFLTFKQLYKAIANYIYYYNHKRIKDKIKM CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SPIKFRETFISNYN CHHHHHHHHHCCCC >Mature Secondary Structure SRKGNCLDNSVIELFFGTLKRECFYGREKEFLTFKQLYKAIANYIYYYNHKRIKDKIKM CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SPIKFRETFISNYN CHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]