Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
---|---|
Accession | NC_007295 |
Length | 897,405 |
Click here to switch to the map view.
The map label for this gene is 71893727
Identifier: 71893727
GI number: 71893727
Start: 461191
End: 463005
Strand: Reverse
Name: 71893727
Synonym: MHJ_0374
Alternate gene names: NA
Gene position: 463005-461191 (Counterclockwise)
Preceding gene: 71893733
Following gene: 71893726
Centisome position: 51.59
GC content: 32.4
Gene sequence:
>1815_bases ATGAATTTCAAAAAATATTTAAAATTATTCCCTATTTTATCTCCCTCATTTTTCCTAATTGCCGCTGGGTGCGGTAGTCA GAAAGAACAAGTAGTACTAAACACAAGTCAGGGTGTTTTTTGGCCTTTAATTTTTGGGCTCAATGAATATGGAAAAAATG AAAAAGGACTAATTCCTTATTATAATAAGACGTTTAAAGACGATCCTGATTTTGTCCCAGTTCGGCTTGTGCTTGATAAT GAATCAAATGCAAAAACACAGTCCCAGCTCACCCAGAATATCAAAAATTTACTTGATTCAAACTCCGATCAGATTCCTAG CCTTGTTCTTGGCGATCTTTCAACTGCCTCAGTTTTAGCAAAACATAACCGACTTTTGGAAATCAAGAACGAAAAATTAG GCCCTGATTTATTTGTTGATAAACTTGTTAGCGCCTATAATAGTTCTGATTTTGGTCAGAATAAGTTTTATAATATCCCT TTTAATAAAAATGATGTTGATGCTCTTGGTTTTAACCTTGATAATCTAAAAATAATTTTTGATCTAATCGAAAAAGGCGG AGGTAGTATTGATAAATCAAGTGAGCTCTATCAAAAAGCAGTTGAAGCTGAAAATAATGGGAATTCTACCCCAAAAAACA GTTTATTCAGGGCAATTGATATTATAGCCCCAGATGTTTTTAAGGACCTAAAAGTTGATCTTTCGACTTTTGAAAATATT GAAAATGCTCTTGAATTTGCCACTAAATTTATTAACGGAGTCAAATTTAGAGAAGATGCCCAACTTGATGAGGCAACTGA GAATGCTACAATTTTTGACCTTGATTATTCCCAGATAATTTTCCATAAGGATCTGATCTCAAAAACAGGTAGTCCTTTCT GGAGTCCAAAAGGTAAAAATTTAGACTTTTTAATTAATTCAGATCCAAATTTGCGCCAAGAATTTATAAAAACCTATGAT AAATACGTTAAAAGTAATAAAAAATTGACCAAAAAAGTCAAAAATCAGACAAAAATCCTTCAAGCTTTCCAGTTTAAAAA TTTTAAAGCGCCGGGAATTGGCCAGTGAGGAAGTCATGATCTTTTACAATATCGCACGGTTTTTGGTTATATTCCCGGAG TTGGAATCAAGCAATCAATGGATTCAGCAACCTCAAGAAACTTATTTGCCAAAAATATGCCCGAAAAGGCTAAAAAATTT GCAACTTTTAATGACATTTTCCATACAAATCAGCCTTTAAAAGCTCTACCTGACTCCCCCGTTTCAATTTATTATTCAGG CGGTTCATCTTTAATTCCTATAAAAACTGGAAATGAAAAAATTGATAAGGGAACGCAGAAATTTTTAACCTGATTATATA CAGGAAAAAACGATATTGACGGGAAATTAATTGATAATGCCGACTACTTAATGAAAAATACGGGTTATTTTATCCCGTTA AAAACGATGGTCACCAAAGAAAAACTTGATGAAATCAAAGCAAAATATAATCAATATTATACCACAATTAAAGATTTTGA GAAAAAAAATAAAAAAAGTTTTGAACTAATCGGCGAAGATGCCAAAAAAATTGACTGAAATTTATACGAAAAAGCAGCAA ATCTGCGTTCAGTAATCATCTCAATGGAGTCAATGCTAAAAGCCCTTGATAATAAAAACGGTCAAAAATCAGAAATTCTT ACCGATAATGGTGATTTTAAGGCTACAAAAATTTCTAATATCATACTTGATTCGCTAATCGAATCAACCCGGTTTGAAAA TCCCCAGATCAAAACCGGGCAGGAAATTCTGAAATTAATTGATGAACAAAATTAA
Upstream 100 bases:
>100_bases ATTTATAATTTATTATATTCAAAAAATTTTAAAAGAACAATAAAAATTTTTCTTATTTTTTTATAAAAAATTTCACAAAA ATTAAAAAGCGAGAAATCTT
Downstream 100 bases:
>100_bases AATTTTTACTTAAAAAATCCTAATTTTTTTTTAATTTTGCAAGCAAAACTAGAAAATTAGTTTTGCTTTTTATTTTTATA AAAAATAATTTTAATGTTAT
Product: putative lipoprotein
Products: NA
Alternate protein names: Lipoprotein LppB Family; Prolipoprotein B
Number of amino acids: Translated: 604; Mature: 604
Protein sequence:
>604_residues MNFKKYLKLFPILSPSFFLIAAGCGSQKEQVVLNTSQGVFWPLIFGLNEYGKNEKGLIPYYNKTFKDDPDFVPVRLVLDN ESNAKTQSQLTQNIKNLLDSNSDQIPSLVLGDLSTASVLAKHNRLLEIKNEKLGPDLFVDKLVSAYNSSDFGQNKFYNIP FNKNDVDALGFNLDNLKIIFDLIEKGGGSIDKSSELYQKAVEAENNGNSTPKNSLFRAIDIIAPDVFKDLKVDLSTFENI ENALEFATKFINGVKFREDAQLDEATENATIFDLDYSQIIFHKDLISKTGSPFWSPKGKNLDFLINSDPNLRQEFIKTYD KYVKSNKKLTKKVKNQTKILQAFQFKNFKAPGIGQWGSHDLLQYRTVFGYIPGVGIKQSMDSATSRNLFAKNMPEKAKKF ATFNDIFHTNQPLKALPDSPVSIYYSGGSSLIPIKTGNEKIDKGTQKFLTWLYTGKNDIDGKLIDNADYLMKNTGYFIPL KTMVTKEKLDEIKAKYNQYYTTIKDFEKKNKKSFELIGEDAKKIDWNLYEKAANLRSVIISMESMLKALDNKNGQKSEIL TDNGDFKATKISNIILDSLIESTRFENPQIKTGQEILKLIDEQN
Sequences:
>Translated_604_residues MNFKKYLKLFPILSPSFFLIAAGCGSQKEQVVLNTSQGVFWPLIFGLNEYGKNEKGLIPYYNKTFKDDPDFVPVRLVLDN ESNAKTQSQLTQNIKNLLDSNSDQIPSLVLGDLSTASVLAKHNRLLEIKNEKLGPDLFVDKLVSAYNSSDFGQNKFYNIP FNKNDVDALGFNLDNLKIIFDLIEKGGGSIDKSSELYQKAVEAENNGNSTPKNSLFRAIDIIAPDVFKDLKVDLSTFENI ENALEFATKFINGVKFREDAQLDEATENATIFDLDYSQIIFHKDLISKTGSPFWSPKGKNLDFLINSDPNLRQEFIKTYD KYVKSNKKLTKKVKNQTKILQAFQFKNFKAPGIGQ*GSHDLLQYRTVFGYIPGVGIKQSMDSATSRNLFAKNMPEKAKKF ATFNDIFHTNQPLKALPDSPVSIYYSGGSSLIPIKTGNEKIDKGTQKFLT*LYTGKNDIDGKLIDNADYLMKNTGYFIPL KTMVTKEKLDEIKAKYNQYYTTIKDFEKKNKKSFELIGEDAKKID*NLYEKAANLRSVIISMESMLKALDNKNGQKSEIL TDNGDFKATKISNIILDSLIESTRFENPQIKTGQEILKLIDEQN >Mature_604_residues MNFKKYLKLFPILSPSFFLIAAGCGSQKEQVVLNTSQGVFWPLIFGLNEYGKNEKGLIPYYNKTFKDDPDFVPVRLVLDN ESNAKTQSQLTQNIKNLLDSNSDQIPSLVLGDLSTASVLAKHNRLLEIKNEKLGPDLFVDKLVSAYNSSDFGQNKFYNIP FNKNDVDALGFNLDNLKIIFDLIEKGGGSIDKSSELYQKAVEAENNGNSTPKNSLFRAIDIIAPDVFKDLKVDLSTFENI ENALEFATKFINGVKFREDAQLDEATENATIFDLDYSQIIFHKDLISKTGSPFWSPKGKNLDFLINSDPNLRQEFIKTYD KYVKSNKKLTKKVKNQTKILQAFQFKNFKAPGIGQ*GSHDLLQYRTVFGYIPGVGIKQSMDSATSRNLFAKNMPEKAKKF ATFNDIFHTNQPLKALPDSPVSIYYSGGSSLIPIKTGNEKIDKGTQKFLT*LYTGKNDIDGKLIDNADYLMKNTGYFIPL KTMVTKEKLDEIKAKYNQYYTTIKDFEKKNKKSFELIGEDAKKID*NLYEKAANLRSVIISMESMLKALDNKNGQKSEIL TDNGDFKATKISNIILDSLIESTRFENPQIKTGQEILKLIDEQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67853; Mature: 67853
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFKKYLKLFPILSPSFFLIAAGCGSQKEQVVLNTSQGVFWPLIFGLNEYGKNEKGLIPY CCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCC YNKTFKDDPDFVPVRLVLDNESNAKTQSQLTQNIKNLLDSNSDQIPSLVLGDLSTASVLA CCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHH KHNRLLEIKNEKLGPDLFVDKLVSAYNSSDFGQNKFYNIPFNKNDVDALGFNLDNLKIIF HCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHCCCCCHHHHHH DLIEKGGGSIDKSSELYQKAVEAENNGNSTPKNSLFRAIDIIAPDVFKDLKVDLSTFENI HHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHH ENALEFATKFINGVKFREDAQLDEATENATIFDLDYSQIIFHKDLISKTGSPFWSPKGKN HHHHHHHHHHHHCCCCCCCCCHHHCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCC LDFLINSDPNLRQEFIKTYDKYVKSNKKLTKKVKNQTKILQAFQFKNFKAPGIGQGSHDL EEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH LQYRTVFGYIPGVGIKQSMDSATSRNLFAKNMPEKAKKFATFNDIFHTNQPLKALPDSPV HHHHHHHHHCCCCCHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCCCE SIYYSGGSSLIPIKTGNEKIDKGTQKFLTLYTGKNDIDGKLIDNADYLMKNTGYFIPLKT EEEECCCCEEEEEECCCHHHHHHHHHEEEEECCCCCCCCEEECCCHHHHHCCCCEEEHHH MVTKEKLDEIKAKYNQYYTTIKDFEKKNKKSFELIGEDAKKIDNLYEKAANLRSVIISME HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SMLKALDNKNGQKSEILTDNGDFKATKISNIILDSLIESTRFENPQIKTGQEILKLIDEQ HHHHHHHCCCCCCCCEECCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC N C >Mature Secondary Structure MNFKKYLKLFPILSPSFFLIAAGCGSQKEQVVLNTSQGVFWPLIFGLNEYGKNEKGLIPY CCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCC YNKTFKDDPDFVPVRLVLDNESNAKTQSQLTQNIKNLLDSNSDQIPSLVLGDLSTASVLA CCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHH KHNRLLEIKNEKLGPDLFVDKLVSAYNSSDFGQNKFYNIPFNKNDVDALGFNLDNLKIIF HCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHCCCCCHHHHHH DLIEKGGGSIDKSSELYQKAVEAENNGNSTPKNSLFRAIDIIAPDVFKDLKVDLSTFENI HHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHH ENALEFATKFINGVKFREDAQLDEATENATIFDLDYSQIIFHKDLISKTGSPFWSPKGKN HHHHHHHHHHHHCCCCCCCCCHHHCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCC LDFLINSDPNLRQEFIKTYDKYVKSNKKLTKKVKNQTKILQAFQFKNFKAPGIGQGSHDL EEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH LQYRTVFGYIPGVGIKQSMDSATSRNLFAKNMPEKAKKFATFNDIFHTNQPLKALPDSPV HHHHHHHHHCCCCCHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCCCE SIYYSGGSSLIPIKTGNEKIDKGTQKFLTLYTGKNDIDGKLIDNADYLMKNTGYFIPLKT EEEECCCCEEEEEECCCHHHHHHHHHEEEEECCCCCCCCEEECCCHHHHHCCCCEEEHHH MVTKEKLDEIKAKYNQYYTTIKDFEKKNKKSFELIGEDAKKIDNLYEKAANLRSVIISME HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SMLKALDNKNGQKSEILTDNGDFKATKISNIILDSLIESTRFENPQIKTGQEILKLIDEQ HHHHHHHCCCCCCCCEECCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC N C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA