Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
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Accession | NC_007295 |
Length | 897,405 |
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The map label for this gene is 71893685
Identifier: 71893685
GI number: 71893685
Start: 400637
End: 401422
Strand: Reverse
Name: 71893685
Synonym: MHJ_0331
Alternate gene names: NA
Gene position: 401422-400637 (Counterclockwise)
Preceding gene: 71893686
Following gene: 71893684
Centisome position: 44.73
GC content: 21.5
Gene sequence:
>786_bases TTGTCCCCTATTAAATTTATGACTTATAAAAATCATAATTTTATTATTTCACTACCAGAACAACTTTTTAATTATAAAGA TGTAAGTAAAAATAGTAACAAAATTACAAAATTAGATGATAAATTTGATGTTTATTTTAAGGTTTATTCAAAAAACAATT TTCAAAAAACAAACGATTTATCAACTATAAAATTAAATAAAATTCAGGATTTATATTTGTATAACTTCTTAGATAAAACA TCGTCAGAATTTGAGAGTTTTTTAGATCTAATGACCAAAAAAGAGAAAATTTTAGCGCGTAATAATTTGAAGATAACCAC ATTATATGGGTCCAAAAATGAACAATATTCAAAAGATGAACCCAAAACAGAAATTTTTTTAGATTTTGACGATGTAAAAC AATTTATTTATAATAAAAATTTATCTAAAAACCTTGAATGAGAAGAAGCATTTCACCTCTCTAATTTATTTGTTCCCAGC AAAAATATTGATAAACCTGAAAGATTTAATAAATTCATTCTCAAATCTCAAAAAGTAAATGAAATTTTTCTTGATGAAGT TTTTTATTCAGAAATTGATAAAAACTCAGGCAAAATTACACTCTATTCTTTAAACTACAAATCAATTTTTCCAAAAACCT TAAAAAATATTGAAAAATTAAATAATAAAGATTTACTAATGTTTGAAAAAATTGATTTTGGTGATATAAATATTAAAGAT GTGGAGTTAAAAACAGTAAATTCACTCGAAGAATTTAATAATATATATAAAAAAATACAAGGCTAG
Upstream 100 bases:
>100_bases ATGATAAAAATTTTTTTACTAAAAATTTATTATTTATATATATTGCCGAGAAAACATTAGCTAACCCATTACTTATAAAT GAAAAATATTTACCCACTAA
Downstream 100 bases:
>100_bases CATGGATTTAAAAAAATATAAAAAATTTTTTCTAATAGGATTTATATTAACCAACTTAGCCGCCGCTACCGCGGTTTCTC TTGGCTTGATTCTTAATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MSPIKFMTYKNHNFIISLPEQLFNYKDVSKNSNKITKLDDKFDVYFKVYSKNNFQKTNDLSTIKLNKIQDLYLYNFLDKT SSEFESFLDLMTKKEKILARNNLKITTLYGSKNEQYSKDEPKTEIFLDFDDVKQFIYNKNLSKNLEWEEAFHLSNLFVPS KNIDKPERFNKFILKSQKVNEIFLDEVFYSEIDKNSGKITLYSLNYKSIFPKTLKNIEKLNNKDLLMFEKIDFGDINIKD VELKTVNSLEEFNNIYKKIQG
Sequences:
>Translated_261_residues MSPIKFMTYKNHNFIISLPEQLFNYKDVSKNSNKITKLDDKFDVYFKVYSKNNFQKTNDLSTIKLNKIQDLYLYNFLDKT SSEFESFLDLMTKKEKILARNNLKITTLYGSKNEQYSKDEPKTEIFLDFDDVKQFIYNKNLSKNLE*EEAFHLSNLFVPS KNIDKPERFNKFILKSQKVNEIFLDEVFYSEIDKNSGKITLYSLNYKSIFPKTLKNIEKLNNKDLLMFEKIDFGDINIKD VELKTVNSLEEFNNIYKKIQG >Mature_260_residues SPIKFMTYKNHNFIISLPEQLFNYKDVSKNSNKITKLDDKFDVYFKVYSKNNFQKTNDLSTIKLNKIQDLYLYNFLDKTS SEFESFLDLMTKKEKILARNNLKITTLYGSKNEQYSKDEPKTEIFLDFDDVKQFIYNKNLSKNLE*EEAFHLSNLFVPSK NIDKPERFNKFILKSQKVNEIFLDEVFYSEIDKNSGKITLYSLNYKSIFPKTLKNIEKLNNKDLLMFEKIDFGDINIKDV ELKTVNSLEEFNNIYKKIQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30902; Mature: 30770
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPIKFMTYKNHNFIISLPEQLFNYKDVSKNSNKITKLDDKFDVYFKVYSKNNFQKTNDL CCCCEEEEEECCCEEEECCHHHCCCCCCCCCCCCEEEECCCEEEEEEEEECCCCCCCCCC STIKLNKIQDLYLYNFLDKTSSEFESFLDLMTKKEKILARNNLKITTLYGSKNEQYSKDE CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC PKTEIFLDFDDVKQFIYNKNLSKNLEEEAFHLSNLFVPSKNIDKPERFNKFILKSQKVNE CCEEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCHHH IFLDEVFYSEIDKNSGKITLYSLNYKSIFPKTLKNIEKLNNKDLLMFEKIDFGDINIKDV HHHHHHHHHHHCCCCCEEEEEECCCHHHCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEE ELKTVNSLEEFNNIYKKIQG EEHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SPIKFMTYKNHNFIISLPEQLFNYKDVSKNSNKITKLDDKFDVYFKVYSKNNFQKTNDL CCCEEEEEECCCEEEECCHHHCCCCCCCCCCCCEEEECCCEEEEEEEEECCCCCCCCCC STIKLNKIQDLYLYNFLDKTSSEFESFLDLMTKKEKILARNNLKITTLYGSKNEQYSKDE CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC PKTEIFLDFDDVKQFIYNKNLSKNLEEEAFHLSNLFVPSKNIDKPERFNKFILKSQKVNE CCEEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCHHH IFLDEVFYSEIDKNSGKITLYSLNYKSIFPKTLKNIEKLNNKDLLMFEKIDFGDINIKDV HHHHHHHHHHHCCCCCEEEEEECCCHHHCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEE ELKTVNSLEEFNNIYKKIQG EEHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA