Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
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Accession | NC_007295 |
Length | 897,405 |
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The map label for this gene is 71893684
Identifier: 71893684
GI number: 71893684
Start: 399163
End: 400422
Strand: Reverse
Name: 71893684
Synonym: MHJ_0330
Alternate gene names: NA
Gene position: 400422-399163 (Counterclockwise)
Preceding gene: 71893685
Following gene: 71893683
Centisome position: 44.62
GC content: 25.4
Gene sequence:
>1260_bases TTATGACTAAATAACCCATATTGATATAACATTTTGACAAAACAGCCCCAAAAAGTGGATTTATTAATTCAAAAATACCC CCTATTTGAAAACAATTTATTTGATAATTCATTTAACAATAACGCTTTAAGAAAATTATCAAGTTTCTTTCGTTCTGAGA GCGCCAAAAACAAAGACACAATGGAATTTAATCTTATTTGGGATCAAGGGCAATTAAAAGACAAGAAAATTGTAGACAAT TTCGTTGTCTTAGATAATAAAAATGATTTTGTATCTTTTTTTTCTAAATTAAAAATTGAAAAACTAAGTAAAAGAATTTT GTCAACACCTGACTTTTTTAAGAAAAAATCAATTATTATTTATATACGTCCTCATGATATTGCTGATGATTCATCGTTTA ATTCAAAATCAAAAATATCATCATTAAACCCTAATCATATTTTCCAAAACAAACAAAATAATGGAAAAACAAGTATTATT TCTTTTGACTCAAAATTTGATAATTTTTTTCGTACAGGAGAAAAGTACAGAGAGACCGGTCCGCCAAAAGTAATTAACTA CAATTTTGCTAGAGCTTCTCTGTTTTCAAATTCAACAACTACAAATTTCGATATTTTTTATAAAATTATAGATAAGTCAA ACAAACATGTTTTTGATCATAGTCTAGATATTCATATTAGTAATATTGAAGATCTTGTACTTTACAATAAAATTATTCGC CATAAAGAATCAAATGAATTTAAAAAATTTCTTGTAAAAAAGCAAGAAATTTTTAAGAAAAACCCTTTTCAACTTACTCG TTTATATGCTATGCAGGGTTTAGATCTATCAAAGCAGAGCACTGAAGAAAACCAAATTTTTTCTACATTAGATCAAACAA AAAAATTCATTAGTAATAATTCGCTATTAAAAAGCTGGGATTGGGGCGAGGCTTTTCACCCTTCAAATTTGTTCATTAAC AACGATAACAACTCTGAAGAATTTAATAAATTCATACTTAAAAAACAAAATCCAAAAATTATTTTTGACGATCAGATTTT ATATTGGCAGATAGAGAAAGATATAATTAAAATTTATACCTTTAATTATAAAGATTTGTTTCCTAATTTTGCGGTTGAAC CAGATAATTTTATAGTTAATGATCTTCAAAAATTTGAAAAAATAGATATTGGAAATACTGATATTAAAAAGCTAAAGTAC ATAAAAATCAAAACATTACAGGAATTTAACTCATTGCATAATCAAATAGGAACAGCTTAA
Upstream 100 bases:
>100_bases AAATAATTTAAAAAATGAAACCCAATTTAAAATTAAGGATGATAATAATAAATTTTTTAGTATCTCAGACTCTAAAAAAA TAACTGATCTTAATAAACTT
Downstream 100 bases:
>100_bases TTTTAGTTTGCTATACAAAAAATAAAAAAAATGTAAAATAAGACAAAAATTTAATGACGTTGTTATAAATTAATGCACTA ATTTTTATATTTTTTAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MWLNNPYWYNILTKQPQKVDLLIQKYPLFENNLFDNSFNNNALRKLSSFFRSESAKNKDTMEFNLIWDQGQLKDKKIVDN FVVLDNKNDFVSFFSKLKIEKLSKRILSTPDFFKKKSIIIYIRPHDIADDSSFNSKSKISSLNPNHIFQNKQNNGKTSII SFDSKFDNFFRTGEKYRETGPPKVINYNFARASLFSNSTTTNFDIFYKIIDKSNKHVFDHSLDIHISNIEDLVLYNKIIR HKESNEFKKFLVKKQEIFKKNPFQLTRLYAMQGLDLSKQSTEENQIFSTLDQTKKFISNNSLLKSWDWGEAFHPSNLFIN NDNNSEEFNKFILKKQNPKIIFDDQILYWQIEKDIIKIYTFNYKDLFPNFAVEPDNFIVNDLQKFEKIDIGNTDIKKLKY IKIKTLQEFNSLHNQIGTA
Sequences:
>Translated_419_residues L*LNNPY*YNILTKQPQKVDLLIQKYPLFENNLFDNSFNNNALRKLSSFFRSESAKNKDTMEFNLIWDQGQLKDKKIVDN FVVLDNKNDFVSFFSKLKIEKLSKRILSTPDFFKKKSIIIYIRPHDIADDSSFNSKSKISSLNPNHIFQNKQNNGKTSII SFDSKFDNFFRTGEKYRETGPPKVINYNFARASLFSNSTTTNFDIFYKIIDKSNKHVFDHSLDIHISNIEDLVLYNKIIR HKESNEFKKFLVKKQEIFKKNPFQLTRLYAMQGLDLSKQSTEENQIFSTLDQTKKFISNNSLLKSWDWGEAFHPSNLFIN NDNNSEEFNKFILKKQNPKIIFDDQILYWQIEKDIIKIYTFNYKDLFPNFAVEPDNFIVNDLQKFEKIDIGNTDIKKLKY IKIKTLQEFNSLHNQIGTA >Mature_419_residues L*LNNPY*YNILTKQPQKVDLLIQKYPLFENNLFDNSFNNNALRKLSSFFRSESAKNKDTMEFNLIWDQGQLKDKKIVDN FVVLDNKNDFVSFFSKLKIEKLSKRILSTPDFFKKKSIIIYIRPHDIADDSSFNSKSKISSLNPNHIFQNKQNNGKTSII SFDSKFDNFFRTGEKYRETGPPKVINYNFARASLFSNSTTTNFDIFYKIIDKSNKHVFDHSLDIHISNIEDLVLYNKIIR HKESNEFKKFLVKKQEIFKKNPFQLTRLYAMQGLDLSKQSTEENQIFSTLDQTKKFISNNSLLKSWDWGEAFHPSNLFIN NDNNSEEFNKFILKKQNPKIIFDDQILYWQIEKDIIKIYTFNYKDLFPNFAVEPDNFIVNDLQKFEKIDIGNTDIKKLKY IKIKTLQEFNSLHNQIGTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49268; Mature: 49268
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure LLNNPYYNILTKQPQKVDLLIQKYPLFENNLFDNSFNNNALRKLSSFFRSESAKNKDTME CCCCCCCCEECCCCCCEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEE FNLIWDQGQLKDKKIVDNFVVLDNKNDFVSFFSKLKIEKLSKRILSTPDFFKKKSIIIYI EEEEECCCCCCCHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCEEEEE RPHDIADDSSFNSKSKISSLNPNHIFQNKQNNGKTSIISFDSKFDNFFRTGEKYRETGPP CCCCCCCCCCCCCCHHHCCCCCCHHCCCCCCCCCEEEEEECHHHHHHHHCCHHHHHCCCC KVINYNFARASLFSNSTTTNFDIFYKIIDKSNKHVFDHSLDIHISNIEDLVLYNKIIRHK CEEEECCHHHHHCCCCCCCCCEEEEEEECCCCCEEECCEEEEEECCHHHHHHHHHHHHCC ESNEFKKFLVKKQEIFKKNPFQLTRLYAMQGLDLSKQSTEENQIFSTLDQTKKFISNNSL CCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCE LKSWDWGEAFHPSNLFINNDNNSEEFNKFILKKQNPKIIFDDQILYWQIEKDIIKIYTFN EECCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCEEECCCEEEEEEECCEEEEEEEC YKDLFPNFAVEPDNFIVNDLQKFEKIDIGNTDIKKLKYIKIKTLQEFNSLHNQIGTA HHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHEEEEEHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA