Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
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Accession | NC_007295 |
Length | 897,405 |
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The map label for this gene is 71893668
Identifier: 71893668
GI number: 71893668
Start: 382692
End: 384149
Strand: Reverse
Name: 71893668
Synonym: MHJ_0314
Alternate gene names: NA
Gene position: 384149-382692 (Counterclockwise)
Preceding gene: 71893669
Following gene: 71893664
Centisome position: 42.81
GC content: 26.47
Gene sequence:
>1458_bases ATCCTTAGTAAATTTTTGGGAATAACCCTTTTAATTCCGGCATTTTTTTTAACTTCCTGCAGAAATTTAATTCCTTTTAT TGTTAAGCAAATTTTTAACAAAGATGAGGGAATTAACAATCCAGAAAATTATAATTCTTATTATTTTTTAAATTTACTAG CGAAGCATTATGAAGAATTTAATGCAAAAAATGGTACTTTTTCAGCCTTAAATCTGTTTTATAATCAACCCGAAAAACAA CGGGACAAATTTTTATTCCTTGGTGAACAAAGTAGAATAACAATTGAAAATTTAGAGCAATTTCAAAAAAATATTGTTGA TAGAACTGAAGAAATTATAAAAAATAATCCTAATATTGCCAATGTTAATAGTTCTGAACTCAAGTCAGAATTTGAAGACA AATTTCTAAAAGGAGAGCTTCTTGAAAAAGTCTTAGAAAAAAACAATATTATAATAGGCGAGCGTGGCAGCTATTGAATG CCAACTCGTGTTACCCACTATTATTTTGAAGAAAATGGTTTTTCAAACATTATAGCCACAAGATTTACACCAGATTATAT TATAGATGCAGATTTAATTGAGCCCGCTGTAGTTTTTAAAGATTCACCTTTTTTTAATGTTATAGTCTACCCTAAAAATA AAACAATCACCTTTAGGAACATTGAAGAAAAAATTTACACTGGCCATAATGATAAAAATATAGACTATAAAAGAAAGAAA ATATTAATTGAAGGAGAAGCTAGAAAAATTTATAATAAACTCGCAAAAAAGTACAATTTATCAAAAAACAAGATTAGTAC TTCTTACCCCTCTTTTATGTTTAATATTATCGATTTTAGCCAAGAAATTAATAATATTAAAACTTTAAAGCCAAAAATTC TTGATTTAATTACAAATAAAATTAATCCTTGATCTAACAGTTTTTTACCAAAAAAACATGTAATTATTAAAAATATTGAC GAATTTAAGACAACAATTATTGACCGAATTTTAAAATTAGATCCTAAATTAAAACTTGACCAAAATGATTTAATTTCTGA TTTTGAAGAAAAATTTCTAAACAGCGAAAAACTTGATGAATTTCTAAAAAATAATAATATTTTTATTTACGAAACTTGGG AGCGAATTGGTTATGAACCATTTTGAGGAGGGGTTCTCCAGCCTATATCGCCCCCTACTAATTTTTCAAAAAGGGCGGAA TGAGAAAAATTGGTTCTTAGAAAAACAGAAAATAATAATATTTTTTTGACAGCAATTTTTCAAACGGATTTAACACTAAA TTTTGTTAGAAGTCCCGAATCTAGTTTTGATAAAGTGGCCTTCCAAATCCTGGCTTTTCCTAAGGATAAAAATGTCGTTT TTGATAAAAAAGTTAGCCGACTTGAACTAATTGAAGATTTAAAAAACAATTATTTAGATAAATATGAAGAAGATCCAAAA GAAAAAAACTACATATAA
Upstream 100 bases:
>100_bases TATCGGCTTTATATCAAAAAATTTAAATCTGTAACTTTTAATAATTCTGTTGAAGATAAATTAGCACTTTCTTATTTGGT TAATAATGAAAAATAAACTA
Downstream 100 bases:
>100_bases GTTTAAATTAGTAAAAAAAATCAGGCAAATAATTTTTATTTGTAGTTTGTGGTAAAAACTCATTTGCATTTTAAGCAACC TTTTTATAGACTTTTCTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MLSKFLGITLLIPAFFLTSCRNLIPFIVKQIFNKDEGINNPENYNSYYFLNLLAKHYEEFNAKNGTFSALNLFYNQPEKQ RDKFLFLGEQSRITIENLEQFQKNIVDRTEEIIKNNPNIANVNSSELKSEFEDKFLKGELLEKVLEKNNIIIGERGSYWM PTRVTHYYFEENGFSNIIATRFTPDYIIDADLIEPAVVFKDSPFFNVIVYPKNKTITFRNIEEKIYTGHNDKNIDYKRKK ILIEGEARKIYNKLAKKYNLSKNKISTSYPSFMFNIIDFSQEINNIKTLKPKILDLITNKINPWSNSFLPKKHVIIKNID EFKTTIIDRILKLDPKLKLDQNDLISDFEEKFLNSEKLDEFLKNNNIFIYETWERIGYEPFWGGVLQPISPPTNFSKRAE WEKLVLRKTENNNIFLTAIFQTDLTLNFVRSPESSFDKVAFQILAFPKDKNVVFDKKVSRLELIEDLKNNYLDKYEEDPK EKNYI
Sequences:
>Translated_485_residues MLSKFLGITLLIPAFFLTSCRNLIPFIVKQIFNKDEGINNPENYNSYYFLNLLAKHYEEFNAKNGTFSALNLFYNQPEKQ RDKFLFLGEQSRITIENLEQFQKNIVDRTEEIIKNNPNIANVNSSELKSEFEDKFLKGELLEKVLEKNNIIIGERGSY*M PTRVTHYYFEENGFSNIIATRFTPDYIIDADLIEPAVVFKDSPFFNVIVYPKNKTITFRNIEEKIYTGHNDKNIDYKRKK ILIEGEARKIYNKLAKKYNLSKNKISTSYPSFMFNIIDFSQEINNIKTLKPKILDLITNKINP*SNSFLPKKHVIIKNID EFKTTIIDRILKLDPKLKLDQNDLISDFEEKFLNSEKLDEFLKNNNIFIYETWERIGYEPF*GGVLQPISPPTNFSKRAE *EKLVLRKTENNNIFLTAIFQTDLTLNFVRSPESSFDKVAFQILAFPKDKNVVFDKKVSRLELIEDLKNNYLDKYEEDPK EKNYI >Mature_485_residues MLSKFLGITLLIPAFFLTSCRNLIPFIVKQIFNKDEGINNPENYNSYYFLNLLAKHYEEFNAKNGTFSALNLFYNQPEKQ RDKFLFLGEQSRITIENLEQFQKNIVDRTEEIIKNNPNIANVNSSELKSEFEDKFLKGELLEKVLEKNNIIIGERGSY*M PTRVTHYYFEENGFSNIIATRFTPDYIIDADLIEPAVVFKDSPFFNVIVYPKNKTITFRNIEEKIYTGHNDKNIDYKRKK ILIEGEARKIYNKLAKKYNLSKNKISTSYPSFMFNIIDFSQEINNIKTLKPKILDLITNKINP*SNSFLPKKHVIIKNID EFKTTIIDRILKLDPKLKLDQNDLISDFEEKFLNSEKLDEFLKNNNIFIYETWERIGYEPF*GGVLQPISPPTNFSKRAE *EKLVLRKTENNNIFLTAIFQTDLTLNFVRSPESSFDKVAFQILAFPKDKNVVFDKKVSRLELIEDLKNNYLDKYEEDPK EKNYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56483; Mature: 56483
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSKFLGITLLIPAFFLTSCRNLIPFIVKQIFNKDEGINNPENYNSYYFLNLLAKHYEEF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH NAKNGTFSALNLFYNQPEKQRDKFLFLGEQSRITIENLEQFQKNIVDRTEEIIKNNPNIA CCCCCCHHHHHHHHCCCHHHCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCC NVNSSELKSEFEDKFLKGELLEKVLEKNNIIIGERGSYMPTRVTHYYFEENGFSNIIATR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEECCCCCCCEEEEC FTPDYIIDADLIEPAVVFKDSPFFNVIVYPKNKTITFRNIEEKIYTGHNDKNIDYKRKKI CCCCCEEEHHHCCCEEEEECCCCEEEEEECCCCEEEEEEHHHHHHCCCCCCCCCEEEEEE LIEGEARKIYNKLAKKYNLSKNKISTSYPSFMFNIIDFSQEINNIKTLKPKILDLITNKI EEECHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NPSNSFLPKKHVIIKNIDEFKTTIIDRILKLDPKLKLDQNDLISDFEEKFLNSEKLDEFL CCCCCCCCCCHHHHHCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHH KNNNIFIYETWERIGYEPFGGVLQPISPPTNFSKRAEEKLVLRKTENNNIFLTAIFQTDL HCCCEEEEECHHHCCCCCCCCCCCCCCCCCCHHHHHHHHEEEEEECCCCEEEEEEEECCC TLNFVRSPESSFDKVAFQILAFPKDKNVVFDKKVSRLELIEDLKNNYLDKYEEDPKEKNY EEEEECCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC I C >Mature Secondary Structure MLSKFLGITLLIPAFFLTSCRNLIPFIVKQIFNKDEGINNPENYNSYYFLNLLAKHYEEF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH NAKNGTFSALNLFYNQPEKQRDKFLFLGEQSRITIENLEQFQKNIVDRTEEIIKNNPNIA CCCCCCHHHHHHHHCCCHHHCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCC NVNSSELKSEFEDKFLKGELLEKVLEKNNIIIGERGSYMPTRVTHYYFEENGFSNIIATR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEECCCCCCCEEEEC FTPDYIIDADLIEPAVVFKDSPFFNVIVYPKNKTITFRNIEEKIYTGHNDKNIDYKRKKI CCCCCEEEHHHCCCEEEEECCCCEEEEEECCCCEEEEEEHHHHHHCCCCCCCCCEEEEEE LIEGEARKIYNKLAKKYNLSKNKISTSYPSFMFNIIDFSQEINNIKTLKPKILDLITNKI EEECHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NPSNSFLPKKHVIIKNIDEFKTTIIDRILKLDPKLKLDQNDLISDFEEKFLNSEKLDEFL CCCCCCCCCCHHHHHCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHH KNNNIFIYETWERIGYEPFGGVLQPISPPTNFSKRAEEKLVLRKTENNNIFLTAIFQTDL HCCCEEEEECHHHCCCCCCCCCCCCCCCCCCHHHHHHHHEEEEEECCCCEEEEEEEECCC TLNFVRSPESSFDKVAFQILAFPKDKNVVFDKKVSRLELIEDLKNNYLDKYEEDPKEKNY EEEEECCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC I C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA