Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
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Accession | NC_007295 |
Length | 897,405 |
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The map label for this gene is 71893669
Identifier: 71893669
GI number: 71893669
Start: 384154
End: 384813
Strand: Reverse
Name: 71893669
Synonym: MHJ_0315
Alternate gene names: NA
Gene position: 384813-384154 (Counterclockwise)
Preceding gene: 71893671
Following gene: 71893668
Centisome position: 42.88
GC content: 22.88
Gene sequence:
>660_bases TTGGGTATGAAAATGAAATTAGCGAAATTTAAAAAAATAATTTTATTATTGATGTTTTGACCATCAATTTTTTTAATATA TCACTCTTTTCTTATAAATTTTAATACTAAAAAATATTGATATGCTTCAAATTTTAGTAATAAAATCGATATAAGAGAAC CTTTTGCCAAACAGTTAAGTAACTCGCCAAAAATTGATGATTTTGATAATCAATTCGAATTAAAACTATTGTTAAACCCT AATTTCGGGAGTACTGAATCTAAAGAAATAAGTAATTTTAATCTTGAATTTATTAAAAAAATAGAAAAATCAAGATTAAA ATTCAAAAAAGCTAAGATGGACAAATATAAAAATGACTTTGACAAATGGTCAAAAACACATATTAATTCTGAACGTTTAA ACTTAGAAGCTACTAAAAAAAATCAAAATGACACTTGGGTTTCAGATTATGATTTGTATTTGCAAAAACTTGATTCAAAC AATAATTGAATTGATGTTTCTTGGTCAACAAGTATTAAAAGCAATGATGAATTAATTGATTTTAGAGCAAAAGAATCAGG CTACTATCGGCTTTATATCAAAAAATTTAAATCTGTAACTTTTAATAATTCTGTTGAAGATAAATTAGCACTTTCTTATT TGGTTAATAATGAAAAATAA
Upstream 100 bases:
>100_bases TAGAAGTCGGGTTTTCAATAAAAAAATTAAAGCGATAATAAAATGAATATAATTAAATTAAAAACATAAAACATGTTATA ATGTTTATAAATAATTTTAA
Downstream 100 bases:
>100_bases ACTAATCCTTAGTAAATTTTTGGGAATAACCCTTTTAATTCCGGCATTTTTTTTAACTTCCTGCAGAAATTTAATTCCTT TTATTGTTAAGCAAATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MGMKMKLAKFKKIILLLMFWPSIFLIYHSFLINFNTKKYWYASNFSNKIDIREPFAKQLSNSPKIDDFDNQFELKLLLNP NFGSTESKEISNFNLEFIKKIEKSRLKFKKAKMDKYKNDFDKWSKTHINSERLNLEATKKNQNDTWVSDYDLYLQKLDSN NNWIDVSWSTSIKSNDELIDFRAKESGYYRLYIKKFKSVTFNNSVEDKLALSYLVNNEK
Sequences:
>Translated_219_residues MGMKMKLAKFKKIILLLMF*PSIFLIYHSFLINFNTKKY*YASNFSNKIDIREPFAKQLSNSPKIDDFDNQFELKLLLNP NFGSTESKEISNFNLEFIKKIEKSRLKFKKAKMDKYKNDFDKWSKTHINSERLNLEATKKNQNDTWVSDYDLYLQKLDSN NN*IDVSWSTSIKSNDELIDFRAKESGYYRLYIKKFKSVTFNNSVEDKLALSYLVNNEK >Mature_218_residues GMKMKLAKFKKIILLLMF*PSIFLIYHSFLINFNTKKY*YASNFSNKIDIREPFAKQLSNSPKIDDFDNQFELKLLLNPN FGSTESKEISNFNLEFIKKIEKSRLKFKKAKMDKYKNDFDKWSKTHINSERLNLEATKKNQNDTWVSDYDLYLQKLDSNN N*IDVSWSTSIKSNDELIDFRAKESGYYRLYIKKFKSVTFNNSVEDKLALSYLVNNEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25600; Mature: 25468
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMKMKLAKFKKIILLLMFPSIFLIYHSFLINFNTKKYYASNFSNKIDIREPFAKQLSNS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHCCC PKIDDFDNQFELKLLLNPNFGSTESKEISNFNLEFIKKIEKSRLKFKKAKMDKYKNDFDK CCCCCCCCCEEEEEEECCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH WSKTHINSERLNLEATKKNQNDTWVSDYDLYLQKLDSNNNIDVSWSTSIKSNDELIDFRA HHHHCCCCHHEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEE KESGYYRLYIKKFKSVTFNNSVEDKLALSYLVNNEK CCCCEEEEEEEHHHHCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure GMKMKLAKFKKIILLLMFPSIFLIYHSFLINFNTKKYYASNFSNKIDIREPFAKQLSNS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHCCC PKIDDFDNQFELKLLLNPNFGSTESKEISNFNLEFIKKIEKSRLKFKKAKMDKYKNDFDK CCCCCCCCCEEEEEEECCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH WSKTHINSERLNLEATKKNQNDTWVSDYDLYLQKLDSNNNIDVSWSTSIKSNDELIDFRA HHHHCCCCHHEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEE KESGYYRLYIKKFKSVTFNNSVEDKLALSYLVNNEK CCCCEEEEEEEHHHHCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA