Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
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Accession | NC_007295 |
Length | 897,405 |
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The map label for this gene is 71893637
Identifier: 71893637
GI number: 71893637
Start: 335642
End: 337528
Strand: Reverse
Name: 71893637
Synonym: MHJ_0281
Alternate gene names: NA
Gene position: 337528-335642 (Counterclockwise)
Preceding gene: 71893638
Following gene: 71893636
Centisome position: 37.61
GC content: 21.73
Gene sequence:
>1887_bases ATACCAATGAAATTCAAGATCTTTTACAAAAAGCGGTTTTGATTTTTTATTATTAGTTTAAGTATACTATCAATGGGAAT TTCTATTCCTTTGATATACTTTTTTGTAAATCGAACTGTTGAGATCGATATTCTTCCATTTAGATCAAAAATTTTAGAAA ATAATTCAAAACCTTCAGGTTTTTACTCAAGCAAATTTCAGAAAATAGATGATTTTATTCAAACTGAAGAATTAAATCGC AATAAAAGTTTTGTAATAAAAAGTAATATATTAGGAAAATATGATTATTTTGATGGTAATAAAATTATTGGGATTACAAA AACTGTCAATAACAAAAGATTAGAAGAAAAAGTTATTAATGGATTAAAAAATATTCCTCAAGATGCGATTTCGTATGATT TCGAAAGAATTTATGACATTGTAAATCTTTATATAAATATAAAACCAAAAAATAATATTTCAAAACTCATTAGATATATT TCCGAATATTACCAAAAGGATAAGAAACTATTTAAATACAAATTAGAACCTCCTAAGGAATATAACCCTATATTTCGTGA TTTAAATTTTCTTGTCTCTTATTTTAAATTAAATAATTTGGATTTTGAAAAATATTTTGAAATTAAGAATTGAATAAAAA AATCATTGCAGGAATTAGACTTCAAAAGTGATGAAATTATCCCTGAAATAAACGAAGATCCCATAATTACTTCAAAAAAA CAAACTTTGCTTTTTATAAAATATTCTCCGATTTTATCACTAATTTCTCTTTTAGGAAAAGATTTTTTTGCTGATATAAT TAAGGAAAAACATGAGTCAATTATTTTTTTAATAAAGAGCTGAGATAATGTTTTTACAAAAAGTTTAAAAAATGGTTCAG TTTGAGACTTGGACCATCCTGCAATTCCAGGGGTAATTTCTTTTTATCTTGTTAGTAAAAATTTTTATGATTATCCTAAT CAGGATTGAATAGCGAAAATGAATGCTATAAAAAAATGATTTCTTGATTTTGACAAAAATAGGGATTTAGCTTTTTATGT TTGACCAATAATTAATTATTATTTTTATAATAAGGATAATTTAGACTTTGAAATTACTAAAAAAACAGAAGACTTAGTTA ATTACAACTTTGATTATCAATTATTTCCAAATAAACCTGATATTTCACAGACAATTTTTTTATATCAAATTTTTGATTCT GAAAATAAAAAAAATAATGTAAATTCAAAATTGAAACCAACAATTGAAGACTATTTTAATAAAACATTAAAGCAGGCACA AAATTATGATGATTTCTTTTTAGATTTATATAATTTTGTATTTTTTAAGGTAAGATACGATTCTAATTTGTTTATACTTA ACAATGATTTTTTAGAAAATATTTTAAGCTATGCTAAATTTGTTAAAAATCCAGTTGATTTTTTCTATTTTTTCAAAACA GTCGCATTATTGAGTGCTTTTCTTGATACAAAAACAAAAATTACAATTTCTGAAGCAGTGGCAAACAATGTTATTAATGC AAAATTAGAAAAAAATTCACCTTTTTTATTTAAATTTATTAATTTATTTTTAAAATTTATAGTAAAAAATGAATTTATCA ATGATAAAGAAATTGTTGATTACCTAAACGCAAATCTTGAGGTCAAAAATATAAAAAATCCGCAATTTTTTGAATTATTG TTTCTTTATCTTGAATTTATAAAATCAATTAAAATAATTTCAGAAAATAAACTTGATTATAAGAAGTTAGAAAATTTTAT CTTGGGTATAAAAAATGAAATTTTTCAGGAAATTAGTAAAAAGAGTGGCAAAACACCATTTTTAAATATTAAAACAATTT ATCTAGCATATCAAATTGATTGGTTAGTAAAAAATGGTACAAATTAA
Upstream 100 bases:
>100_bases ACATGCATGAGCTGATTATGGGAATTTAAGTGTTAATATATCATCAAATTCAGATAATTATAGGGTCGAAAAACTATCGG AGGATATTCAGGAATAAAAT
Downstream 100 bases:
>100_bases AAATTTGACGAAAAAATTTGGCCCAAGAAAAATTTTTGATAATTTTAGTCTTGAAATTCCCGAAAATAAACTTGTTTTTA TAACCGGAGAATCTGGTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 628; Mature: 627
Protein sequence:
>628_residues MPMKFKIFYKKRFWFFIISLSILSMGISIPLIYFFVNRTVEIDILPFRSKILENNSKPSGFYSSKFQKIDDFIQTEELNR NKSFVIKSNILGKYDYFDGNKIIGITKTVNNKRLEEKVINGLKNIPQDAISYDFERIYDIVNLYINIKPKNNISKLIRYI SEYYQKDKKLFKYKLEPPKEYNPIFRDLNFLVSYFKLNNLDFEKYFEIKNWIKKSLQELDFKSDEIIPEINEDPIITSKK QTLLFIKYSPILSLISLLGKDFFADIIKEKHESIIFLIKSWDNVFTKSLKNGSVWDLDHPAIPGVISFYLVSKNFYDYPN QDWIAKMNAIKKWFLDFDKNRDLAFYVWPIINYYFYNKDNLDFEITKKTEDLVNYNFDYQLFPNKPDISQTIFLYQIFDS ENKKNNVNSKLKPTIEDYFNKTLKQAQNYDDFFLDLYNFVFFKVRYDSNLFILNNDFLENILSYAKFVKNPVDFFYFFKT VALLSAFLDTKTKITISEAVANNVINAKLEKNSPFLFKFINLFLKFIVKNEFINDKEIVDYLNANLEVKNIKNPQFFELL FLYLEFIKSIKIISENKLDYKKLENFILGIKNEIFQEISKKSGKTPFLNIKTIYLAYQIDWLVKNGTN
Sequences:
>Translated_628_residues MPMKFKIFYKKRF*FFIISLSILSMGISIPLIYFFVNRTVEIDILPFRSKILENNSKPSGFYSSKFQKIDDFIQTEELNR NKSFVIKSNILGKYDYFDGNKIIGITKTVNNKRLEEKVINGLKNIPQDAISYDFERIYDIVNLYINIKPKNNISKLIRYI SEYYQKDKKLFKYKLEPPKEYNPIFRDLNFLVSYFKLNNLDFEKYFEIKN*IKKSLQELDFKSDEIIPEINEDPIITSKK QTLLFIKYSPILSLISLLGKDFFADIIKEKHESIIFLIKS*DNVFTKSLKNGSV*DLDHPAIPGVISFYLVSKNFYDYPN QD*IAKMNAIKK*FLDFDKNRDLAFYV*PIINYYFYNKDNLDFEITKKTEDLVNYNFDYQLFPNKPDISQTIFLYQIFDS ENKKNNVNSKLKPTIEDYFNKTLKQAQNYDDFFLDLYNFVFFKVRYDSNLFILNNDFLENILSYAKFVKNPVDFFYFFKT VALLSAFLDTKTKITISEAVANNVINAKLEKNSPFLFKFINLFLKFIVKNEFINDKEIVDYLNANLEVKNIKNPQFFELL FLYLEFIKSIKIISENKLDYKKLENFILGIKNEIFQEISKKSGKTPFLNIKTIYLAYQIDWLVKNGTN >Mature_627_residues PMKFKIFYKKRF*FFIISLSILSMGISIPLIYFFVNRTVEIDILPFRSKILENNSKPSGFYSSKFQKIDDFIQTEELNRN KSFVIKSNILGKYDYFDGNKIIGITKTVNNKRLEEKVINGLKNIPQDAISYDFERIYDIVNLYINIKPKNNISKLIRYIS EYYQKDKKLFKYKLEPPKEYNPIFRDLNFLVSYFKLNNLDFEKYFEIKN*IKKSLQELDFKSDEIIPEINEDPIITSKKQ TLLFIKYSPILSLISLLGKDFFADIIKEKHESIIFLIKS*DNVFTKSLKNGSV*DLDHPAIPGVISFYLVSKNFYDYPNQ D*IAKMNAIKK*FLDFDKNRDLAFYV*PIINYYFYNKDNLDFEITKKTEDLVNYNFDYQLFPNKPDISQTIFLYQIFDSE NKKNNVNSKLKPTIEDYFNKTLKQAQNYDDFFLDLYNFVFFKVRYDSNLFILNNDFLENILSYAKFVKNPVDFFYFFKTV ALLSAFLDTKTKITISEAVANNVINAKLEKNSPFLFKFINLFLKFIVKNEFINDKEIVDYLNANLEVKNIKNPQFFELLF LYLEFIKSIKIISENKLDYKKLENFILGIKNEIFQEISKKSGKTPFLNIKTIYLAYQIDWLVKNGTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73653; Mature: 73522
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMKFKIFYKKRFFFIISLSILSMGISIPLIYFFVNRTVEIDILPFRSKILENNSKPSGF CCCEEEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHCCEEEEEEECHHHHHHCCCCCCCCC YSSKFQKIDDFIQTEELNRNKSFVIKSNILGKYDYFDGNKIIGITKTVNNKRLEEKVING HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCEEEEEEECCCHHHHHHHHHHH LKNIPQDAISYDFERIYDIVNLYINIKPKNNISKLIRYISEYYQKDKKLFKYKLEPPKEY HHCCCHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCC NPIFRDLNFLVSYFKLNNLDFEKYFEIKNIKKSLQELDFKSDEIIPEINEDPIITSKKQT CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCE LLFIKYSPILSLISLLGKDFFADIIKEKHESIIFLIKSDNVFTKSLKNGSVDLDHPAIPG EEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEHHCCCCCCCCCCCCCCH VISFYLVSKNFYDYPNQDIAKMNAIKKFLDFDKNRDLAFYVPIINYYFYNKDNLDFEITK HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCCEEEEC KTEDLVNYNFDYQLFPNKPDISQTIFLYQIFDSENKKNNVNSKLKPTIEDYFNKTLKQAQ CHHHHHCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHC NYDDFFLDLYNFVFFKVRYDSNLFILNNDFLENILSYAKFVKNPVDFFYFFKTVALLSAF CCCHHHHHHHHHEEEEEEECCEEEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LDTKTKITISEAVANNVINAKLEKNSPFLFKFINLFLKFIVKNEFINDKEIVDYLNANLE HCCCCEEEEHHHHHCCHHEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEE VKNIKNPQFFELLFLYLEFIKSIKIISENKLDYKKLENFILGIKNEIFQEISKKSGKTPF EECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCE LNIKTIYLAYQIDWLVKNGTN EEEEEEEEEEEEEEEEECCCC >Mature Secondary Structure PMKFKIFYKKRFFFIISLSILSMGISIPLIYFFVNRTVEIDILPFRSKILENNSKPSGF CCEEEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHCCEEEEEEECHHHHHHCCCCCCCCC YSSKFQKIDDFIQTEELNRNKSFVIKSNILGKYDYFDGNKIIGITKTVNNKRLEEKVING HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCEEEEEEECCCHHHHHHHHHHH LKNIPQDAISYDFERIYDIVNLYINIKPKNNISKLIRYISEYYQKDKKLFKYKLEPPKEY HHCCCHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCC NPIFRDLNFLVSYFKLNNLDFEKYFEIKNIKKSLQELDFKSDEIIPEINEDPIITSKKQT CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCE LLFIKYSPILSLISLLGKDFFADIIKEKHESIIFLIKSDNVFTKSLKNGSVDLDHPAIPG EEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEHHCCCCCCCCCCCCCCH VISFYLVSKNFYDYPNQDIAKMNAIKKFLDFDKNRDLAFYVPIINYYFYNKDNLDFEITK HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCCEEEEC KTEDLVNYNFDYQLFPNKPDISQTIFLYQIFDSENKKNNVNSKLKPTIEDYFNKTLKQAQ CHHHHHCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHC NYDDFFLDLYNFVFFKVRYDSNLFILNNDFLENILSYAKFVKNPVDFFYFFKTVALLSAF CCCHHHHHHHHHEEEEEEECCEEEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LDTKTKITISEAVANNVINAKLEKNSPFLFKFINLFLKFIVKNEFINDKEIVDYLNANLE HCCCCEEEEHHHHHCCHHEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEE VKNIKNPQFFELLFLYLEFIKSIKIISENKLDYKKLENFILGIKNEIFQEISKKSGKTPF EECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCE LNIKTIYLAYQIDWLVKNGTN EEEEEEEEEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA