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The map label for this gene is lolD2 [H]

Identifier: 71893636

GI number: 71893636

Start: 333347

End: 335404

Strand: Reverse

Name: lolD2 [H]

Synonym: MHJ_0280

Alternate gene names: 71893636

Gene position: 335404-333347 (Counterclockwise)

Preceding gene: 71893637

Following gene: 71893635

Centisome position: 37.37

GC content: 26.53

Gene sequence:

>2058_bases
ATTTACAGGGTTTGAATTGGAATACAAGCAAGTAATGAAAAAATCAGCAAAAAAAATATGATTAAAAATGCAAATTTTTT
GAATATTTCTAAGGAAAATTTGGATACAGTGGTTTCTGATTTATCAGGTGGGGAAAAACAAAGAATTGCAATTTTACGTG
CCTTTGCGCGAAAATCAGATTTCATTTTACTTGATGAACCAACAGGTAATTTAGATTTAGAAAATGCCGAAATTATTTTT
GAAAAACTCTACCAATTAAGGAAAAACAAGACAATTTTAATAATTAGCCACAATTTAGAACTAGCAAAAAAATACGGGGA
CTTAATAATATCACTTGAAAGAAAACCGGTTGTAAAGATTCTAAAAATTAAACATAATCAAGTAAAAGTTAACCAAAAAC
AAGTAGAAATTGATTTATTTTTTAAAAAAAAACCTTTAAATTTATTTGATAAATTTAAATCATTGTTTTTATTTTTAAAA
ACTGATTTTAAAACAAGGGGGAGTTCAACGCTTTTTGTTTTAATATTTTTTTTAATTAATCTTTTAAGTCTTAATCTTTT
TTTTGTCCTTGATTCGAAAGTATCAAATTTTAATAGTGAAAAGATTCAGCAATACCAGTTAGATTCAGTCGAACTTGCAA
AGAAAAAAAATATTGCTTTTTTTGATAAGGATTTTCAAAATTTTGAAAGGCAAAAAGAAATTGCTGTCAAAGTTTTACCA
ATTTTTCCGACTAATAATCTAATTTTTATTGATAAAAATTACGAGATTCCAGAAAATAATGTCCTAAAACCGGCACTAAT
TTCCTCAGGAACCCCAATTGAATTAATCGATGAGAGCGATTTTTTTAGAAAACGATTTTTCTTTGATAATAAGAATCTAA
AAGGTCATTTTATTAAAAATGAGAATGAAATTATCCTTTCAAAAACAGTTATTGATAAACTAAAAATAATAGATCCAATT
GGAAAGATAGTAAAAATTCATAAACTTCGTAACTCGAATATTAACAAAAATCCAACAACTTTTGAAGTAATAATTGCCGG
GGTTAATTATCTAAAAGATGTCTCAGGCAAAATTCCTTCATTTATTCATTATAAATTAGTTGAAAAAATTAATCAAAAGT
TTGGTCGAAATGATACATTTTTTGCTGATTTTGATCATATTCAAATTAGCCTATTAAATGTTTTGAATGCAGGTCTTAAC
CTAAAAAATGAAGAGGTCCTAGAAAATATTCCCGTCAAAAATTTGATATTAGAAACTGGAAAAATCCCGGAAAACAAAGG
TGAATTGCTCTTATCGACTAAATTATTTAACTCAATAAAGAATTCTAAAAATATCAAAATAGGTGATTTTATTATGATTG
ATTCAGAATTTGGGCAGGCAATTCCTTATAAGATTTCCGGAGTCTTTAATCTAACACAAAATTCGGAATTACTTAGTAAA
AATCAGCAACTAAAATCAGAAAATCTTGTCATTTTTTATAAAAATGGTAATGATTTAAGGAAAACTTTATACCCTTCAGG
GGCTAAAATTTTCCTTAGAACTGATGATATTGACAAAAATTTAGCAAGATTTAAAGCCGAAAATCCAAATTTTATCTTCT
TTAGAGATCTTGAATGAGTAAAAATAAAACTTTTAAGTGGAACTTTTATGATAAAATCGATCCTTTTAGGGATTCAGTTG
CTTTTACTTATTGCACTTATAACTTTTTCTGTCTTATTTTCCAAAAACCTAGTGCGGCTTAAAACTAAATCAATCGGAAT
TCTTAAGTCTTTAGGTCTTAAAAAGCGAAAAATTTTTATTATCCATTTATTAAATATTCTTGTTATTTGCGGGCTTATGC
TGACTTCTGGCCTAATTTTGACTCTTGGAACAATGCCATATTTTTATACCTTAATCACAAATGTTGACTTTGGCACGCCG
GGCTTTCTACAAATTTTCATAAATTTTATCATTTCCTGGTTTGTAATTAGTTTATTTGTTTTTCTGATTTACTTTTTTAT
TTCATTAAAAGTTTATAAAAAACCGATTACTGAATTATTACGATATGATTTTCGCTAG

Upstream 100 bases:

>100_bases
CTAAAAAAGATGGTGGTGAAATTCTATTTTTTAAAGATGGCAAAGAAGAAAAAAACCCTTTAATTGATGTAGTTTTTCAG
GATTTTAACCTTATTAATTC

Downstream 100 bases:

>100_bases
TTTTTTAAAAAGTAATTAAGTCGAATTTTTGTCAAAATTATGAATTTTTAAACAAAAATTCATAATTTTTTCTTATTTTT
TACAAAAAATTTCAGTTTTT

Product: putative ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 685; Mature: 685

Protein sequence:

>685_residues
MYRVWIGIQASNEKISKKNMIKNANFLNISKENLDTVVSDLSGGEKQRIAILRAFARKSDFILLDEPTGNLDLENAEIIF
EKLYQLRKNKTILIISHNLELAKKYGDLIISLERKPVVKILKIKHNQVKVNQKQVEIDLFFKKKPLNLFDKFKSLFLFLK
TDFKTRGSSTLFVLIFFLINLLSLNLFFVLDSKVSNFNSEKIQQYQLDSVELAKKKNIAFFDKDFQNFERQKEIAVKVLP
IFPTNNLIFIDKNYEIPENNVLKPALISSGTPIELIDESDFFRKRFFFDNKNLKGHFIKNENEIILSKTVIDKLKIIDPI
GKIVKIHKLRNSNINKNPTTFEVIIAGVNYLKDVSGKIPSFIHYKLVEKINQKFGRNDTFFADFDHIQISLLNVLNAGLN
LKNEEVLENIPVKNLILETGKIPENKGELLLSTKLFNSIKNSKNIKIGDFIMIDSEFGQAIPYKISGVFNLTQNSELLSK
NQQLKSENLVIFYKNGNDLRKTLYPSGAKIFLRTDDIDKNLARFKAENPNFIFFRDLEWVKIKLLSGTFMIKSILLGIQL
LLLIALITFSVLFSKNLVRLKTKSIGILKSLGLKKRKIFIIHLLNILVICGLMLTSGLILTLGTMPYFYTLITNVDFGTP
GFLQIFINFIISWFVISLFVFLIYFFISLKVYKKPITELLRYDFR

Sequences:

>Translated_685_residues
MYRV*IGIQASNEKISKKNMIKNANFLNISKENLDTVVSDLSGGEKQRIAILRAFARKSDFILLDEPTGNLDLENAEIIF
EKLYQLRKNKTILIISHNLELAKKYGDLIISLERKPVVKILKIKHNQVKVNQKQVEIDLFFKKKPLNLFDKFKSLFLFLK
TDFKTRGSSTLFVLIFFLINLLSLNLFFVLDSKVSNFNSEKIQQYQLDSVELAKKKNIAFFDKDFQNFERQKEIAVKVLP
IFPTNNLIFIDKNYEIPENNVLKPALISSGTPIELIDESDFFRKRFFFDNKNLKGHFIKNENEIILSKTVIDKLKIIDPI
GKIVKIHKLRNSNINKNPTTFEVIIAGVNYLKDVSGKIPSFIHYKLVEKINQKFGRNDTFFADFDHIQISLLNVLNAGLN
LKNEEVLENIPVKNLILETGKIPENKGELLLSTKLFNSIKNSKNIKIGDFIMIDSEFGQAIPYKISGVFNLTQNSELLSK
NQQLKSENLVIFYKNGNDLRKTLYPSGAKIFLRTDDIDKNLARFKAENPNFIFFRDLE*VKIKLLSGTFMIKSILLGIQL
LLLIALITFSVLFSKNLVRLKTKSIGILKSLGLKKRKIFIIHLLNILVICGLMLTSGLILTLGTMPYFYTLITNVDFGTP
GFLQIFINFIISWFVISLFVFLIYFFISLKVYKKPITELLRYDFR
>Mature_685_residues
MYRV*IGIQASNEKISKKNMIKNANFLNISKENLDTVVSDLSGGEKQRIAILRAFARKSDFILLDEPTGNLDLENAEIIF
EKLYQLRKNKTILIISHNLELAKKYGDLIISLERKPVVKILKIKHNQVKVNQKQVEIDLFFKKKPLNLFDKFKSLFLFLK
TDFKTRGSSTLFVLIFFLINLLSLNLFFVLDSKVSNFNSEKIQQYQLDSVELAKKKNIAFFDKDFQNFERQKEIAVKVLP
IFPTNNLIFIDKNYEIPENNVLKPALISSGTPIELIDESDFFRKRFFFDNKNLKGHFIKNENEIILSKTVIDKLKIIDPI
GKIVKIHKLRNSNINKNPTTFEVIIAGVNYLKDVSGKIPSFIHYKLVEKINQKFGRNDTFFADFDHIQISLLNVLNAGLN
LKNEEVLENIPVKNLILETGKIPENKGELLLSTKLFNSIKNSKNIKIGDFIMIDSEFGQAIPYKISGVFNLTQNSELLSK
NQQLKSENLVIFYKNGNDLRKTLYPSGAKIFLRTDDIDKNLARFKAENPNFIFFRDLE*VKIKLLSGTFMIKSILLGIQL
LLLIALITFSVLFSKNLVRLKTKSIGILKSLGLKKRKIFIIHLLNILVICGLMLTSGLILTLGTMPYFYTLITNVDFGTP
GFLQIFINFIISWFVISLFVFLIYFFISLKVYKKPITELLRYDFR

Specific function: Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-de

COG id: COG1136

COG function: function code V; ABC-type antimicrobial peptide transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1787143, Length=107, Percent_Identity=39.2523364485981, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI87081834, Length=68, Percent_Identity=48.5294117647059, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1786703, Length=74, Percent_Identity=40.5405405405405, Blast_Score=66, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17541710, Length=123, Percent_Identity=36.5853658536585, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI281363262, Length=116, Percent_Identity=37.0689655172414, Blast_Score=72, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24653245, Length=116, Percent_Identity=37.0689655172414, Blast_Score=72, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015854
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 78751; Mature: 78751

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRVIGIQASNEKISKKNMIKNANFLNISKENLDTVVSDLSGGEKQRIAILRAFARKSDF
CEEEEEEECCCCHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCE
ILLDEPTGNLDLENAEIIFEKLYQLRKNKTILIISHNLELAKKYGDLIISLERKPVVKIL
EEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCEEEEECCCCCEEHE
KIKHNQVKVNQKQVEIDLFFKKKPLNLFDKFKSLFLFLKTDFKTRGSSTLFVLIFFLINL
EEECCEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHH
LSLNLFFVLDSKVSNFNSEKIQQYQLDSVELAKKKNIAFFDKDFQNFERQKEIAVKVLPI
HHCEEEEEEECHHCCCCHHHHHHHCCCHHHHHHHCCCEEECHHHHHHHHHHCEEEEEEEE
FPTNNLIFIDKNYEIPENNVLKPALISSGTPIELIDESDFFRKRFFFDNKNLKGHFIKNE
ECCCCEEEEECCCCCCCCCCCCCHHHCCCCCEEEECCCHHHHHHHEECCCCCCEEEECCC
NEIILSKTVIDKLKIIDPIGKIVKIHKLRNSNINKNPTTFEVIIAGVNYLKDVSGKIPSF
CCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCHH
IHYKLVEKINQKFGRNDTFFADFDHIQISLLNVLNAGLNLKNEEVLENIPVKNLILETGK
HHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHEECCC
IPENKGELLLSTKLFNSIKNSKNIKIGDFIMIDSEFGQAIPYKISGVFNLTQNSELLSKN
CCCCCCCEEEEHHHHHHHCCCCCEEECEEEEEECCCCCCCCEEEEEEEEECCCCHHHHHH
QQLKSENLVIFYKNGNDLRKTLYPSGAKIFLRTDDIDKNLARFKAENPNFIFFRDLEVKI
HHCCCCCEEEEEECCCHHHHHHCCCCCEEEEEECCCCHHHHHHCCCCCCEEEEEECEEEE
KLLSGTFMIKSILLGIQLLLLIALITFSVLFSKNLVRLKTKSIGILKSLGLKKRKIFIIH
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHH
LLNILVICGLMLTSGLILTLGTMPYFYTLITNVDFGTPGFLQIFINFIISWFVISLFVFL
HHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IYFFISLKVYKKPITELLRYDFR
HHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYRVIGIQASNEKISKKNMIKNANFLNISKENLDTVVSDLSGGEKQRIAILRAFARKSDF
CEEEEEEECCCCHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCE
ILLDEPTGNLDLENAEIIFEKLYQLRKNKTILIISHNLELAKKYGDLIISLERKPVVKIL
EEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCEEEEECCCCCEEHE
KIKHNQVKVNQKQVEIDLFFKKKPLNLFDKFKSLFLFLKTDFKTRGSSTLFVLIFFLINL
EEECCEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHH
LSLNLFFVLDSKVSNFNSEKIQQYQLDSVELAKKKNIAFFDKDFQNFERQKEIAVKVLPI
HHCEEEEEEECHHCCCCHHHHHHHCCCHHHHHHHCCCEEECHHHHHHHHHHCEEEEEEEE
FPTNNLIFIDKNYEIPENNVLKPALISSGTPIELIDESDFFRKRFFFDNKNLKGHFIKNE
ECCCCEEEEECCCCCCCCCCCCCHHHCCCCCEEEECCCHHHHHHHEECCCCCCEEEECCC
NEIILSKTVIDKLKIIDPIGKIVKIHKLRNSNINKNPTTFEVIIAGVNYLKDVSGKIPSF
CCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCHH
IHYKLVEKINQKFGRNDTFFADFDHIQISLLNVLNAGLNLKNEEVLENIPVKNLILETGK
HHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHEECCC
IPENKGELLLSTKLFNSIKNSKNIKIGDFIMIDSEFGQAIPYKISGVFNLTQNSELLSKN
CCCCCCCEEEEHHHHHHHCCCCCEEECEEEEEECCCCCCCCEEEEEEEEECCCCHHHHHH
QQLKSENLVIFYKNGNDLRKTLYPSGAKIFLRTDDIDKNLARFKAENPNFIFFRDLEVKI
HHCCCCCEEEEEECCCHHHHHHCCCCCEEEEEECCCCHHHHHHCCCCCCEEEEEECEEEE
KLLSGTFMIKSILLGIQLLLLIALITFSVLFSKNLVRLKTKSIGILKSLGLKKRKIFIIH
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHH
LLNILVICGLMLTSGLILTLGTMPYFYTLITNVDFGTPGFLQIFINFIISWFVISLFVFL
HHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IYFFISLKVYKKPITELLRYDFR
HHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA