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The map label for this gene is rsgA [H]

Identifier: 71893504

GI number: 71893504

Start: 184634

End: 185491

Strand: Reverse

Name: rsgA [H]

Synonym: MHJ_0148

Alternate gene names: 71893504

Gene position: 185491-184634 (Counterclockwise)

Preceding gene: 71893505

Following gene: 71893503

Centisome position: 20.67

GC content: 28.21

Gene sequence:

>858_bases
ATGAAAGGGCAAGTTGTTCGAATTATTGCCGGTTTTTATGATGTTGTCGATCCTAAAAACCGAAAATTATACCCGCTTTT
AAGAGGTTCTGGCCTTCTTCGGTTGAATGAAACATCGCCAATAGTTGGTGACTTTGTTGATTTTGAAGAAAAAGGCTTTA
TTAAAAAAATTTATGAAAGAAAAAATCAGCTAATTCGTCCAAAAGTAGCCAACATTGATCAAGCTTTAGTTTTTATTTCG
ATTAGAGAACCTAATTTTTCAAGCTTATTATTAGATAAATTTTTATTGGTAATTGAAGCAAAAAATATTCCTGTAATTTT
ATTAGTTACTAAAATTGATCTTGATTCTAATTTTGAAAATTTATTACTTGATTATCAAAAAATGAATTATAACATTTTTT
TTATTAATAATAAAAAAAATGAAATTCCTGTAGAATTAAAAGCCGAATTAGAAAAAAAACTTAACTTTGTTATCGGTCAA
ACCGGTGTCGGAAAAACCAGTTTTATTAATAATTTTTTAGATAAAAAATTTGCTATTCAAGAGATTTCCCAGACACTAAA
CCGTGGAAAGCATACAACTAGAGTCGTCCAAATTATTGAAAAGGAAAATTTTCGGATAATTGATAGCCCCGGTTTTTCCT
CGTTTTCATACAGCGAGATATCCAAAAATGAAATTCGCAATGCTTTTAAAATATTTAAAAAATTTTCATCAGACTGCAAA
TTCCGTTCCTGCTTTCATTTTCAGGAGAAAACTGATCAATGCGGCATTAAAAGGGCGCTAAAAGATGGAAAAATACCAGA
AAATCGTTATAAAAATTATCTTTATTTTTTAGGAAAATATGAAAAGAAAAATTATTAG

Upstream 100 bases:

>100_bases
AATTAAAAATTTGTTCAAATTTCAAGTGGTTAATGACAATTTAGAAGAATGTGTTGCCCAAATAGAAAAAATTATAAGTA
AAGAGATCCAAAAAACTTAG

Downstream 100 bases:

>100_bases
CCCCTCGCTTTTGAATATAAAAAAATCTAGTCGGCTAAAATCAACAAGAATTTTTTTGAATCTTGGCATAAAATGATTTC
ACTTTGATTTTATGGATGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MKGQVVRIIAGFYDVVDPKNRKLYPLLRGSGLLRLNETSPIVGDFVDFEEKGFIKKIYERKNQLIRPKVANIDQALVFIS
IREPNFSSLLLDKFLLVIEAKNIPVILLVTKIDLDSNFENLLLDYQKMNYNIFFINNKKNEIPVELKAELEKKLNFVIGQ
TGVGKTSFINNFLDKKFAIQEISQTLNRGKHTTRVVQIIEKENFRIIDSPGFSSFSYSEISKNEIRNAFKIFKKFSSDCK
FRSCFHFQEKTDQCGIKRALKDGKIPENRYKNYLYFLGKYEKKNY

Sequences:

>Translated_285_residues
MKGQVVRIIAGFYDVVDPKNRKLYPLLRGSGLLRLNETSPIVGDFVDFEEKGFIKKIYERKNQLIRPKVANIDQALVFIS
IREPNFSSLLLDKFLLVIEAKNIPVILLVTKIDLDSNFENLLLDYQKMNYNIFFINNKKNEIPVELKAELEKKLNFVIGQ
TGVGKTSFINNFLDKKFAIQEISQTLNRGKHTTRVVQIIEKENFRIIDSPGFSSFSYSEISKNEIRNAFKIFKKFSSDCK
FRSCFHFQEKTDQCGIKRALKDGKIPENRYKNYLYFLGKYEKKNY
>Mature_285_residues
MKGQVVRIIAGFYDVVDPKNRKLYPLLRGSGLLRLNETSPIVGDFVDFEEKGFIKKIYERKNQLIRPKVANIDQALVFIS
IREPNFSSLLLDKFLLVIEAKNIPVILLVTKIDLDSNFENLLLDYQKMNYNIFFINNKKNEIPVELKAELEKKLNFVIGQ
TGVGKTSFINNFLDKKFAIQEISQTLNRGKHTTRVVQIIEKENFRIIDSPGFSSFSYSEISKNEIRNAFKIFKKFSSDCK
FRSCFHFQEKTDQCGIKRALKDGKIPENRYKNYLYFLGKYEKKNY

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=243, Percent_Identity=30.0411522633745, Blast_Score=116, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000038
- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 33288; Mature: 33288

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGQVVRIIAGFYDVVDPKNRKLYPLLRGSGLLRLNETSPIVGDFVDFEEKGFIKKIYER
CCCCEEEHHHHHHHHCCCCCCEEEEEECCCCEEEECCCCCCHHHHHCCCCCHHHHHHHHH
KNQLIRPKVANIDQALVFISIREPNFSSLLLDKFLLVIEAKNIPVILLVTKIDLDSNFEN
HHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHEEECCCCCEEEEEEEECCCCCHHH
LLLDYQKMNYNIFFINNKKNEIPVELKAELEKKLNFVIGQTGVGKTSFINNFLDKKFAIQ
HHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHH
EISQTLNRGKHTTRVVQIIEKENFRIIDSPGFSSFSYSEISKNEIRNAFKIFKKFSSDCK
HHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
FRSCFHFQEKTDQCGIKRALKDGKIPENRYKNYLYFLGKYEKKNY
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEEEEECCCCCC
>Mature Secondary Structure
MKGQVVRIIAGFYDVVDPKNRKLYPLLRGSGLLRLNETSPIVGDFVDFEEKGFIKKIYER
CCCCEEEHHHHHHHHCCCCCCEEEEEECCCCEEEECCCCCCHHHHHCCCCCHHHHHHHHH
KNQLIRPKVANIDQALVFISIREPNFSSLLLDKFLLVIEAKNIPVILLVTKIDLDSNFEN
HHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHEEECCCCCEEEEEEEECCCCCHHH
LLLDYQKMNYNIFFINNKKNEIPVELKAELEKKLNFVIGQTGVGKTSFINNFLDKKFAIQ
HHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHH
EISQTLNRGKHTTRVVQIIEKENFRIIDSPGFSSFSYSEISKNEIRNAFKIFKKFSSDCK
HHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
FRSCFHFQEKTDQCGIKRALKDGKIPENRYKNYLYFLGKYEKKNY
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA