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The map label for this gene is rpe [H]

Identifier: 71893503

GI number: 71893503

Start: 184003

End: 184641

Strand: Reverse

Name: rpe [H]

Synonym: MHJ_0147

Alternate gene names: 71893503

Gene position: 184641-184003 (Counterclockwise)

Preceding gene: 71893504

Following gene: 71893502

Centisome position: 20.57

GC content: 26.13

Gene sequence:

>639_bases
ATTATTAGCCCCTCGCTTTTGAATATAAAAAAATCTAGTCGGCTAAAATCAACAAGAATTTTTTTGAATCTTGGCATAAA
ATGATTTCACTTTGATTTTATGGATGGTATATTTGTTAAGAATGTAGCAATATCTATTCCAGAAATCAAAAATATTATTA
AAAAATCAAAAGAATTTATCTCTGATGTTCATTTAATGTCTGTTAATCCCGAAGAGCAAATTAAGCAATTACTAGGGTAT
GTGAATTTTGCAACAATTCATTTTGAAAGTAGAAATTATGCTCAAATTAAAGAGATAATATCAAAATATTCGCGAAAAAT
TAAAATAGGAATAGCAATAAAACCTGAGACAAAAATAGAACAAATTTATGATTTATTACCCGAAATTCAGCTAGTTCTAA
TAATGTCAGTTGAACCTGGCAAAGGCGGTCAGGCTTTTATCGAAAATACTTATAAAAAAATAGAAGAATTATCCAAAATA
ATTCAAGAAAATAATTATAAAATTATCATTCAAGTTGATGGTGGCATTAAGGATTTTAATTCAAAAAAGGTTTTTGATTC
TGGGGCTGACGTTATTGTAGTCGGAACTTTTTTAGCTGAAAAACCAACAAAATTAAAAATTAAAAAATTAATTAATTAA

Upstream 100 bases:

>100_bases
ACTGATCAATGCGGCATTAAAAGGGCGCTAAAAGATGGAAAAATACCAGAAAATCGTTATAAAAATTATCTTTATTTTTT
AGGAAAATATGAAAAGAAAA

Downstream 100 bases:

>100_bases
TTAATTAATTTTTTAATTAATAAAAAAACCCAATTTATAAATTTTTCCATAAATTGGGTTTGTAAAACTGTTATTTTTAA
AATTTATAAAAATTTAACTC

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MISPSLLNIKKSSRLKSTRIFLNLGIKWFHFDFMDGIFVKNVAISIPEIKNIIKKSKEFISDVHLMSVNPEEQIKQLLGY
VNFATIHFESRNYAQIKEIISKYSRKIKIGIAIKPETKIEQIYDLLPEIQLVLIMSVEPGKGGQAFIENTYKKIEELSKI
IQENNYKIIIQVDGGIKDFNSKKVFDSGADVIVVGTFLAEKPTKLKIKKLIN

Sequences:

>Translated_212_residues
MISPSLLNIKKSSRLKSTRIFLNLGIK*FHFDFMDGIFVKNVAISIPEIKNIIKKSKEFISDVHLMSVNPEEQIKQLLGY
VNFATIHFESRNYAQIKEIISKYSRKIKIGIAIKPETKIEQIYDLLPEIQLVLIMSVEPGKGGQAFIENTYKKIEELSKI
IQENNYKIIIQVDGGIKDFNSKKVFDSGADVIVVGTFLAEKPTKLKIKKLIN
>Mature_212_residues
MISPSLLNIKKSSRLKSTRIFLNLGIK*FHFDFMDGIFVKNVAISIPEIKNIIKKSKEFISDVHLMSVNPEEQIKQLLGY
VNFATIHFESRNYAQIKEIISKYSRKIKIGIAIKPETKIEQIYDLLPEIQLVLIMSVEPGKGGQAFIENTYKKIEELSKI
IQENNYKIIIQVDGGIKDFNSKKVFDSGADVIVVGTFLAEKPTKLKIKKLIN

Specific function: D-ALLOSE METABOLISM. ESSENTIAL FOR THIS PATHWAY. [C]

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=199, Percent_Identity=32.1608040201005, Blast_Score=99, Evalue=2e-21,
Organism=Homo sapiens, GI219879828, Length=199, Percent_Identity=30.1507537688442, Blast_Score=90, Evalue=1e-18,
Organism=Escherichia coli, GI1790523, Length=195, Percent_Identity=31.2820512820513, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1789788, Length=208, Percent_Identity=28.8461538461538, Blast_Score=91, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17552948, Length=200, Percent_Identity=34, Blast_Score=105, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6322341, Length=220, Percent_Identity=33.1818181818182, Blast_Score=103, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24586301, Length=201, Percent_Identity=33.3333333333333, Blast_Score=108, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 24041; Mature: 24041

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISPSLLNIKKSSRLKSTRIFLNLGIKFHFDFMDGIFVKNVAISIPEIKNIIKKSKEFIS
CCCCCCCCCHHHCCCCCEEEEEEECEEEEEEHHCCEEEHHHEEECHHHHHHHHHHHHHHH
DVHLMSVNPEEQIKQLLGYVNFATIHFESRNYAQIKEIISKYSRKIKIGIAIKPETKIEQ
HEEEEECCHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHCCEEEEEEEECCCHHHHH
IYDLLPEIQLVLIMSVEPGKGGQAFIENTYKKIEELSKIIQENNYKIIIQVDGGIKDFNS
HHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
KKVFDSGADVIVVGTFLAEKPTKLKIKKLIN
CCCCCCCCCEEEEEEHHCCCCCHHHHHHHCC
>Mature Secondary Structure
MISPSLLNIKKSSRLKSTRIFLNLGIKFHFDFMDGIFVKNVAISIPEIKNIIKKSKEFIS
CCCCCCCCCHHHCCCCCEEEEEEECEEEEEEHHCCEEEHHHEEECHHHHHHHHHHHHHHH
DVHLMSVNPEEQIKQLLGYVNFATIHFESRNYAQIKEIISKYSRKIKIGIAIKPETKIEQ
HEEEEECCHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHCCEEEEEEEECCCHHHHH
IYDLLPEIQLVLIMSVEPGKGGQAFIENTYKKIEELSKIIQENNYKIIIQVDGGIKDFNS
HHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
KKVFDSGADVIVVGTFLAEKPTKLKIKKLIN
CCCCCCCCCEEEEEEHHCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]