| Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
|---|---|
| Accession | NC_007295 |
| Length | 897,405 |
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The map label for this gene is 71893472
Identifier: 71893472
GI number: 71893472
Start: 155691
End: 156134
Strand: Reverse
Name: 71893472
Synonym: MHJ_0115
Alternate gene names: NA
Gene position: 156134-155691 (Counterclockwise)
Preceding gene: 71893475
Following gene: 71893464
Centisome position: 17.4
GC content: 28.83
Gene sequence:
>444_bases ATTTCTCCTATTTATCTTGCAAAATTTGAGGAGTTAATTATACGAAAAATTAGGCTAGATAATCAAAAAAATCCGATTTT TAAAGAGGTTTTTCTAAATAAAAATTTAAAAGACAAAGCACTAGATATTAATCAAAAGCCAATTCTAATACCTGAATATG AAGAAAGTCTTGATCAATATAATGCTCGGATTGATGCTTTTTTTAATGGTCTTTTTAGTGAACATGAGAAAAAAGAGGGT TGGACCCAAAATAAGGTTTTTGATTTTATAGTTATTTTTGAAAAAATTATCCGCGAATTTGTCCCAATTATCCCAATTAT GGAGGTTGATACTTACTGAATTATTAACCGAATTCGTGCAGGCGATAGTAACTCTTTCCAATTTGCATTTGATGTTGAAA ACATCAAAGTTAATTATCTAAGTCCTGATGATGGTAAAGAATAG
Upstream 100 bases:
>100_bases ATTGTTTGTCAAAACTAAATATATTCAAAATAGTTTTTGTTTTTATAAATTTTTATGGTCTAATTAACTTTAATTTGAAA AACATTTTTAATCAGATGAA
Downstream 100 bases:
>100_bases AAGCTAATTTAGTCTCTGAATTTAAAAAAGTACTATAAATTTATAGTACTTTTTTATTTTTGAGGTTAAAAATTTAGTGA TTAAAAAATTTAAATTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Oligopeptide ABC Transporter
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSPIYLAKFEELIIRKIRLDNQKNPIFKEVFLNKNLKDKALDINQKPILIPEYEESLDQYNARIDAFFNGLFSEHEKKEG WTQNKVFDFIVIFEKIIREFVPIIPIMEVDTYWIINRIRAGDSNSFQFAFDVENIKVNYLSPDDGKE
Sequences:
>Translated_147_residues MSPIYLAKFEELIIRKIRLDNQKNPIFKEVFLNKNLKDKALDINQKPILIPEYEESLDQYNARIDAFFNGLFSEHEKKEG WTQNKVFDFIVIFEKIIREFVPIIPIMEVDTY*IINRIRAGDSNSFQFAFDVENIKVNYLSPDDGKE >Mature_146_residues SPIYLAKFEELIIRKIRLDNQKNPIFKEVFLNKNLKDKALDINQKPILIPEYEESLDQYNARIDAFFNGLFSEHEKKEGW TQNKVFDFIVIFEKIIREFVPIIPIMEVDTY*IINRIRAGDSNSFQFAFDVENIKVNYLSPDDGKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17278; Mature: 17147
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPIYLAKFEELIIRKIRLDNQKNPIFKEVFLNKNLKDKALDINQKPILIPEYEESLDQY CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHCCCCCCCEECCCHHHHHHHH NARIDAFFNGLFSEHEKKEGWTQNKVFDFIVIFEKIIREFVPIIPIMEVDTYIINRIRAG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC DSNSFQFAFDVENIKVNYLSPDDGKE CCCCEEEEEEECCEEEEEECCCCCCC >Mature Secondary Structure SPIYLAKFEELIIRKIRLDNQKNPIFKEVFLNKNLKDKALDINQKPILIPEYEESLDQY CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHCCCCCCCEECCCHHHHHHHH NARIDAFFNGLFSEHEKKEGWTQNKVFDFIVIFEKIIREFVPIIPIMEVDTYIINRIRAG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC DSNSFQFAFDVENIKVNYLSPDDGKE CCCCEEEEEEECCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA