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The map label for this gene is ureD

Identifier: 71892298

GI number: 71892298

Start: 649631

End: 650467

Strand: Reverse

Name: ureD

Synonym: BPEN_545

Alternate gene names: 71892298

Gene position: 650467-649631 (Counterclockwise)

Preceding gene: 71892299

Following gene: 71892297

Centisome position: 82.17

GC content: 33.09

Gene sequence:

>837_bases
ATGAGTGACGAATTATCTCAGAATTTTATTGACGGTTGGTTAGGGGAGTTAAGATTAAATTTTGCTTTGCGTGGTGGACG
CAGTGTGTTGACCAGATGTAAGCATGTTGGTCCGTTTTACGTGAAAAAAGTTTTTTACTCTGAAAACGATAATACTCCGC
ATGTATATTTGTTACATCCTCCTGGTGGATTAGTGGGAGGGGACAAATTAGTACTGGATGTTAAATTAGAATCAGACAGC
CGGGTATTGTTAACGACACCTGGTGCTGCTAAATTTTATCGTAGTAACGGTCTGTATTCAGAACAGAAACATATATTTAG
ATTAGAACGTAATACTGCTTTAGAATGGGTTCCTCAAAGTAGTATTTTTTTTCCTAAATCTAAAGCAAAAATAGATACTA
CTTTTATTATAGAACAAGGATCAAGAGTTATATCATTTGATATGTTATGTTTTGGAAATTTATCATTAGGTAGTTCTACT
TATCCGGAGGAAGTAGATATACATTTGAATATTTGTTTATCTGATTCAATTGGATTACAGGAACGTTTGCGGATTAATGA
ATTAAATTGTGTTATGAAATTAGGCGGGTTCCGAATAAGTGCTTTACTTTTTGCTGTTCCATCGGATGAAAAAACATTAT
ATAAGGTACGTAAATTAATAACATCAGTTAAACATTTTCAAGTTGGAGGCGCTACATTGTTAGATGAGATTCTTGTAGTA
CGATTATTAGGTAATGACAATCAGTATTTAAAAAAAATGCTTCATCATATTTGGTATACTATACGTCCTTTTATAATAGG
GAAAAAAGCTATGCTACCGCGTATTTGGTTGACATAA

Upstream 100 bases:

>100_bases
CATAGTGTTTTATAAAAGTTAATGTGGTTATTATTGTTTTAATAATTTTTGTAATGGATGTATTGTTTTAATTTTTGAAA
ATATTTTATCTTTCATTTTA

Downstream 100 bases:

>100_bases
GTCAGGAAAATCTATGAAGTTATTACCTCGGGAAAAAGATAAATTATTGTTATTTACAGCAGCATTGTTAGCAGAAAAGC
GTCGAAATCGCGGGTTAAAA

Product: putative urease accessory protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MSDELSQNFIDGWLGELRLNFALRGGRSVLTRCKHVGPFYVKKVFYSENDNTPHVYLLHPPGGLVGGDKLVLDVKLESDS
RVLLTTPGAAKFYRSNGLYSEQKHIFRLERNTALEWVPQSSIFFPKSKAKIDTTFIIEQGSRVISFDMLCFGNLSLGSST
YPEEVDIHLNICLSDSIGLQERLRINELNCVMKLGGFRISALLFAVPSDEKTLYKVRKLITSVKHFQVGGATLLDEILVV
RLLGNDNQYLKKMLHHIWYTIRPFIIGKKAMLPRIWLT

Sequences:

>Translated_278_residues
MSDELSQNFIDGWLGELRLNFALRGGRSVLTRCKHVGPFYVKKVFYSENDNTPHVYLLHPPGGLVGGDKLVLDVKLESDS
RVLLTTPGAAKFYRSNGLYSEQKHIFRLERNTALEWVPQSSIFFPKSKAKIDTTFIIEQGSRVISFDMLCFGNLSLGSST
YPEEVDIHLNICLSDSIGLQERLRINELNCVMKLGGFRISALLFAVPSDEKTLYKVRKLITSVKHFQVGGATLLDEILVV
RLLGNDNQYLKKMLHHIWYTIRPFIIGKKAMLPRIWLT
>Mature_277_residues
SDELSQNFIDGWLGELRLNFALRGGRSVLTRCKHVGPFYVKKVFYSENDNTPHVYLLHPPGGLVGGDKLVLDVKLESDSR
VLLTTPGAAKFYRSNGLYSEQKHIFRLERNTALEWVPQSSIFFPKSKAKIDTTFIIEQGSRVISFDMLCFGNLSLGSSTY
PEEVDIHLNICLSDSIGLQERLRINELNCVMKLGGFRISALLFAVPSDEKTLYKVRKLITSVKHFQVGGATLLDEILVVR
LLGNDNQYLKKMLHHIWYTIRPFIIGKKAMLPRIWLT

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URED_BLOPB (Q492E6)

Other databases:

- EMBL:   CP000016
- RefSeq:   YP_278032.1
- STRING:   Q492E6
- GeneID:   3562882
- GenomeReviews:   CP000016_GR
- KEGG:   bpn:BPEN_545
- eggNOG:   COG0829
- HOGENOM:   HBG711156
- OMA:   VANGELT
- ProtClustDB:   CLSK280916
- BioCyc:   CBLO291272:BPEN_545-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01384
- InterPro:   IPR002669

Pfam domain/function: PF01774 UreD

EC number: NA

Molecular weight: Translated: 31605; Mature: 31474

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDELSQNFIDGWLGELRLNFALRGGRSVLTRCKHVGPFYVKKVFYSENDNTPHVYLLHP
CCCHHHHHHHHHHHHHEEEEEEEECCHHHHHHHHCCCHHHEEEEEECCCCCCCEEEEEEC
PGGLVGGDKLVLDVKLESDSRVLLTTPGAAKFYRSNGLYSEQKHIFRLERNTALEWVPQS
CCCCCCCCEEEEEEEECCCCEEEEECCCCHHHHHCCCCCCCCHHEEEEECCCEEEECCCC
SIFFPKSKAKIDTTFIIEQGSRVISFDMLCFGNLSLGSSTYPEEVDIHLNICLSDSIGLQ
CEECCCCCCCEEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCCHH
ERLRINELNCVMKLGGFRISALLFAVPSDEKTLYKVRKLITSVKHFQVGGATLLDEILVV
HHHHHHHHHEEEHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHE
RLLGNDNQYLKKMLHHIWYTIRPFIIGKKAMLPRIWLT
EEECCCHHHHHHHHHHHHHHHHHHEECCHHHCCEECCC
>Mature Secondary Structure 
SDELSQNFIDGWLGELRLNFALRGGRSVLTRCKHVGPFYVKKVFYSENDNTPHVYLLHP
CCHHHHHHHHHHHHHEEEEEEEECCHHHHHHHHCCCHHHEEEEEECCCCCCCEEEEEEC
PGGLVGGDKLVLDVKLESDSRVLLTTPGAAKFYRSNGLYSEQKHIFRLERNTALEWVPQS
CCCCCCCCEEEEEEEECCCCEEEEECCCCHHHHHCCCCCCCCHHEEEEECCCEEEECCCC
SIFFPKSKAKIDTTFIIEQGSRVISFDMLCFGNLSLGSSTYPEEVDIHLNICLSDSIGLQ
CEECCCCCCCEEEEEEEECCCEEEEEEEEEEECCCCCCCCCCCEEEEEEEEEEECCCCHH
ERLRINELNCVMKLGGFRISALLFAVPSDEKTLYKVRKLITSVKHFQVGGATLLDEILVV
HHHHHHHHHEEEHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHE
RLLGNDNQYLKKMLHHIWYTIRPFIIGKKAMLPRIWLT
EEECCCHHHHHHHHHHHHHHHHHHEECCHHHCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA