Definition | Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome. |
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Accession | NC_007292 |
Length | 791,654 |
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The map label for this gene is nlpB [C]
Identifier: 71892288
GI number: 71892288
Start: 641232
End: 641543
Strand: Reverse
Name: nlpB [C]
Synonym: BPEN_535
Alternate gene names: 71892288
Gene position: 641543-641232 (Counterclockwise)
Preceding gene: 71892289
Following gene: 71892284
Centisome position: 81.04
GC content: 28.53
Gene sequence:
>312_bases ATGTTAACTTTTTTAGAGATTTTGTGTATAATATTGCTATCAGCTTGTTCTTTCGGAATATACAAGGAAGAACGTTGTAA GCTTAATGGTGATTTATCATATTTAGATGCGGCATCTTTGGTGAAATTAAATATACCGGAAGATTTAGATGGTGTATTAC CTATATCATATGATGATTATGTTATTCCTGATGTTACCAGAGAAGATAATAATATTGCTCAAAAAGTAGGTAAACAACTA TACATATGTCCTCCGTTAATTTTTTCTACAGATATGTCACATGAATCATGTTTAATTAATATTGAAGATTAA
Upstream 100 bases:
>100_bases TATCTGAGGTACATCGTGATGTTCTAAAGCAAGCTTTAATAGATTCAGGGTTATTTTATAATCAGTCTAATTATAAATAA TTATTTATATAAGGGTTATA
Downstream 100 bases:
>100_bases TTTTAATATAAGCAATCAGTAATACTTTTTTTGTTGAGATTATTTTCAATATATGTATTAAAAATAATAACTACATGTTT ATTATTCAGTATTCAATTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MLTFLEILCIILLSACSFGIYKEERCKLNGDLSYLDAASLVKLNIPEDLDGVLPISYDDYVIPDVTREDNNIAQKVGKQL YICPPLIFSTDMSHESCLINIED
Sequences:
>Translated_103_residues MLTFLEILCIILLSACSFGIYKEERCKLNGDLSYLDAASLVKLNIPEDLDGVLPISYDDYVIPDVTREDNNIAQKVGKQL YICPPLIFSTDMSHESCLINIED >Mature_103_residues MLTFLEILCIILLSACSFGIYKEERCKLNGDLSYLDAASLVKLNIPEDLDGVLPISYDDYVIPDVTREDNNIAQKVGKQL YICPPLIFSTDMSHESCLINIED
Specific function: Non-Essential Lipoprotein. [C]
COG id: COG3317
COG function: function code M; Uncharacterized lipoprotein
Gene ontology:
Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11574; Mature: 11574
Theoretical pI: Translated: 3.96; Mature: 3.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTFLEILCIILLSACSFGIYKEERCKLNGDLSYLDAASLVKLNIPEDLDGVLPISYDDY CCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCEECCCCCCE VIPDVTREDNNIAQKVGKQLYICPPLIFSTDMSHESCLINIED ECCCCCCCCCHHHHHHCCEEEECCCEEEECCCCCCEEEEEECC >Mature Secondary Structure MLTFLEILCIILLSACSFGIYKEERCKLNGDLSYLDAASLVKLNIPEDLDGVLPISYDDY CCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCEECCCCCCE VIPDVTREDNNIAQKVGKQLYICPPLIFSTDMSHESCLINIED ECCCCCCCCCHHHHHHCCEEEECCCEEEECCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA