Definition | Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome. |
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Accession | NC_007292 |
Length | 791,654 |
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The map label for this gene is hisA
Identifier: 71892240
GI number: 71892240
Start: 574691
End: 575431
Strand: Direct
Name: hisA
Synonym: BPEN_482
Alternate gene names: 71892240
Gene position: 574691-575431 (Clockwise)
Preceding gene: 71892401
Following gene: 71892241
Centisome position: 72.59
GC content: 31.44
Gene sequence:
>741_bases GTGATTATTCCTGCGCTAGATATTATTAACGGAAATATAGTTAGACTATATCAAGGATCTTATTGCATGCAAACTAATTA CGGCGAACCTATATCATTATTAAAGGAATACATACGACAAGGAGCAAAAATGATACATCTAGTTGATCTAGATGGAGCAA AAAATCCATTAAAAAGACAAAGTTTATTAATTAGTCAACTAATAAAAGAAGCCAATCCTTTATCTAAGATACAAATAGGA GGAGGTATACGTAACGCTTCAGATGTAGAAATTCTGTTAGAATCAGGAGCAACACGTATAGTATTAGGTTCTATAGCAGT TACACAACCAAAGATAGTAAAAAAATGGTTTGAATATTTTGATCCAAATACTTTAGTTTTAGCGGTAGATATACACGTTT ATTCTGAAGAAAATCGAAAAGTTGCTATTTACGGTTGGCAAAAAGAAACTGATTTGCAATTAGAACAAATAATAGAAGAA TATTATACTGTAGGCTTAAAACATGTTATTTGCACAGATATCTCCAAAGATGGAACTTTGTTAGGTAGCAATATATCTTT ATATCGATCAATATGTCATGCTTGGCCACGAATAGCATTTCAATCGTCTGGAGGTGTTAATAAATTATCAGAAATATCTA AATTACGTTCTTCTGGAGTGGCAGGAATCATTATTGGTCGTGCTTTTTTAGAAAATACATTTACTATCAATGAGGCTATA TCATGTTGGCAAAACGAATAA
Upstream 100 bases:
>100_bases GGTTATAAAATATAAAAATTTTTTTGGTGTACAATTTCATCCAGAAAAATCAGGAATGCCCGGTCAACAATTAGTAAAAA ATTTTTTGGAGATATAATTT
Downstream 100 bases:
>100_bases TTCCTTGTCTTGATGTAGGTAATAACAAAGTAATTAAAGGAATACAATTTAAAGATCATAAAATTGTAGGAGATATCTTA GAATTAGCAAATAGATATGC
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MIIPALDIINGNIVRLYQGSYCMQTNYGEPISLLKEYIRQGAKMIHLVDLDGAKNPLKRQSLLISQLIKEANPLSKIQIG GGIRNASDVEILLESGATRIVLGSIAVTQPKIVKKWFEYFDPNTLVLAVDIHVYSEENRKVAIYGWQKETDLQLEQIIEE YYTVGLKHVICTDISKDGTLLGSNISLYRSICHAWPRIAFQSSGGVNKLSEISKLRSSGVAGIIIGRAFLENTFTINEAI SCWQNE
Sequences:
>Translated_246_residues MIIPALDIINGNIVRLYQGSYCMQTNYGEPISLLKEYIRQGAKMIHLVDLDGAKNPLKRQSLLISQLIKEANPLSKIQIG GGIRNASDVEILLESGATRIVLGSIAVTQPKIVKKWFEYFDPNTLVLAVDIHVYSEENRKVAIYGWQKETDLQLEQIIEE YYTVGLKHVICTDISKDGTLLGSNISLYRSICHAWPRIAFQSSGGVNKLSEISKLRSSGVAGIIIGRAFLENTFTINEAI SCWQNE >Mature_246_residues MIIPALDIINGNIVRLYQGSYCMQTNYGEPISLLKEYIRQGAKMIHLVDLDGAKNPLKRQSLLISQLIKEANPLSKIQIG GGIRNASDVEILLESGATRIVLGSIAVTQPKIVKKWFEYFDPNTLVLAVDIHVYSEENRKVAIYGWQKETDLQLEQIIEE YYTVGLKHVICTDISKDGTLLGSNISLYRSICHAWPRIAFQSSGGVNKLSEISKLRSSGVAGIIIGRAFLENTFTINEAI SCWQNE
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=246, Percent_Identity=52.4390243902439, Blast_Score=286, Evalue=7e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_BLOPB (Q494D7)
Other databases:
- EMBL: CP000016 - RefSeq: YP_277974.1 - ProteinModelPortal: Q494D7 - STRING: Q494D7 - GeneID: 3562989 - GenomeReviews: CP000016_GR - KEGG: bpn:BPEN_482 - eggNOG: COG0106 - HOGENOM: HBG541613 - OMA: SIIYTDI - ProtClustDB: PRK00748 - BioCyc: CBLO291272:BPEN_482-MONOMER - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 27442; Mature: 27442
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: ACT_SITE 7-7 ACT_SITE 130-130
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIPALDIINGNIVRLYQGSYCMQTNYGEPISLLKEYIRQGAKMIHLVDLDGAKNPLKRQ CCCCCEEECCCCEEEEEECCEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHH SLLISQLIKEANPLSKIQIGGGIRNASDVEILLESGATRIVLGSIAVTQPKIVKKWFEYF HHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHCCCCEEEEECEECCCCHHHHHHHHHC DPNTLVLAVDIHVYSEENRKVAIYGWQKETDLQLEQIIEEYYTVGLKHVICTDISKDGTL CCCEEEEEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCEE LGSNISLYRSICHAWPRIAFQSSGGVNKLSEISKLRSSGVAGIIIGRAFLENTFTINEAI ECCCHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCHHHHH SCWQNE HHHCCC >Mature Secondary Structure MIIPALDIINGNIVRLYQGSYCMQTNYGEPISLLKEYIRQGAKMIHLVDLDGAKNPLKRQ CCCCCEEECCCCEEEEEECCEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHH SLLISQLIKEANPLSKIQIGGGIRNASDVEILLESGATRIVLGSIAVTQPKIVKKWFEYF HHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHCCCCEEEEECEECCCCHHHHHHHHHC DPNTLVLAVDIHVYSEENRKVAIYGWQKETDLQLEQIIEEYYTVGLKHVICTDISKDGTL CCCEEEEEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCEE LGSNISLYRSICHAWPRIAFQSSGGVNKLSEISKLRSSGVAGIIIGRAFLENTFTINEAI ECCCHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCHHHHH SCWQNE HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA