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The map label for this gene is yciC [H]

Identifier: 71892206

GI number: 71892206

Start: 525901

End: 526638

Strand: Direct

Name: yciC [H]

Synonym: BPEN_444

Alternate gene names: 71892206

Gene position: 525901-526638 (Clockwise)

Preceding gene: 71892205

Following gene: 71892208

Centisome position: 66.43

GC content: 25.34

Gene sequence:

>738_bases
ATGATGATCAGAATATCTCAAGACGTATTATGTTTTATTCGTAATTATTACATTAATATTACAACATTAATATTAGCTAC
AACATTAATTCAAGCTAGCTTAGATTATATTTTATTACCAAAAAAAGAAGATTTCATATTTATGAATAACTTTATTAATG
AGAGCTTACAGAACATGATCAAAGAATTATCGTCAGATCAACAGTATATTTTATTAAAATTATCTGCTGCTAATAGTATT
TCTAAGCTTCTAAGTAATACTTTTTTATGCGGAAATATACTAACCATGTTACATGTTTTATCCACTACCGATAAAAATAA
TCAATCTTTCAATATAATAAATATTATTCAGTTAGCAATACCATTATTTCCAAAATTATTACTATTAATTTTTTACACTA
CATTGTGCATGCAACTGGGTTTAATGATAGCAATTGTTCCGGGTATTCTATTAGCCATTATAATCAGCCTAACTCCGGTT
ATGATTATCACTAATAATATACCTATTATGGAAGCCATACGCCTTAGTATAAAAGTAAGCTGTCGTAATATTCATTTAAC
TACACCACCAATATTATTATGGTTTCTAATAAAAACTATACTTATATTGATATTAATCCATTATTTCCATTCTTGGGTCT
TCGTTGTTAAGATTTTAATAAATACCGCGAACAATATATTATCTGTAATTATTTTAATTTATTTATATCGCTTATATATG
ATTATCAGAACAGTATGA

Upstream 100 bases:

>100_bases
ATTGAAATTAAATAATTTGATCATATTTCCCGAATTCAATTTTGAAGAAATATGACCTCTCTACTTTCAAAAAATATTTT
TTGGAAAAATTATAAAAATT

Downstream 100 bases:

>100_bases
AATTATTAATTTTTTAAAAAAATTTTATTTATATTTATATTAAAAATAACTAATATAAAACAAAAACCTGTATATATTGC
AGCCCAAAATAATAAATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MMIRISQDVLCFIRNYYINITTLILATTLIQASLDYILLPKKEDFIFMNNFINESLQNMIKELSSDQQYILLKLSAANSI
SKLLSNTFLCGNILTMLHVLSTTDKNNQSFNIINIIQLAIPLFPKLLLLIFYTTLCMQLGLMIAIVPGILLAIIISLTPV
MIITNNIPIMEAIRLSIKVSCRNIHLTTPPILLWFLIKTILILILIHYFHSWVFVVKILINTANNILSVIILIYLYRLYM
IIRTV

Sequences:

>Translated_245_residues
MMIRISQDVLCFIRNYYINITTLILATTLIQASLDYILLPKKEDFIFMNNFINESLQNMIKELSSDQQYILLKLSAANSI
SKLLSNTFLCGNILTMLHVLSTTDKNNQSFNIINIIQLAIPLFPKLLLLIFYTTLCMQLGLMIAIVPGILLAIIISLTPV
MIITNNIPIMEAIRLSIKVSCRNIHLTTPPILLWFLIKTILILILIHYFHSWVFVVKILINTANNILSVIILIYLYRLYM
IIRTV
>Mature_245_residues
MMIRISQDVLCFIRNYYINITTLILATTLIQASLDYILLPKKEDFIFMNNFINESLQNMIKELSSDQQYILLKLSAANSI
SKLLSNTFLCGNILTMLHVLSTTDKNNQSFNIINIIQLAIPLFPKLLLLIFYTTLCMQLGLMIAIVPGILLAIIISLTPV
MIITNNIPIMEAIRLSIKVSCRNIHLTTPPILLWFLIKTILILILIHYFHSWVFVVKILINTANNILSVIILIYLYRLYM
IIRTV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0259 family [H]

Homologues:

Organism=Escherichia coli, GI1787508, Length=241, Percent_Identity=32.7800829875519, Blast_Score=137, Evalue=5e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009627 [H]

Pfam domain/function: PF06790 UPF0259 [H]

EC number: NA

Molecular weight: Translated: 28131; Mature: 28131

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIRISQDVLCFIRNYYINITTLILATTLIQASLDYILLPKKEDFIFMNNFINESLQNMI
CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEHHHHHHHHHHHHHH
KELSSDQQYILLKLSAANSISKLLSNTFLCGNILTMLHVLSTTDKNNQSFNIINIIQLAI
HHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
PLFPKLLLLIFYTTLCMQLGLMIAIVPGILLAIIISLTPVMIITNNIPIMEAIRLSIKVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCHHHHHHHHHEEE
CRNIHLTTPPILLWFLIKTILILILIHYFHSWVFVVKILINTANNILSVIILIYLYRLYM
EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIRTV
HHHCC
>Mature Secondary Structure
MMIRISQDVLCFIRNYYINITTLILATTLIQASLDYILLPKKEDFIFMNNFINESLQNMI
CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEHHHHHHHHHHHHHH
KELSSDQQYILLKLSAANSISKLLSNTFLCGNILTMLHVLSTTDKNNQSFNIINIIQLAI
HHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
PLFPKLLLLIFYTTLCMQLGLMIAIVPGILLAIIISLTPVMIITNNIPIMEAIRLSIKVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCHHHHHHHHHEEE
CRNIHLTTPPILLWFLIKTILILILIHYFHSWVFVVKILINTANNILSVIILIYLYRLYM
EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIRTV
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA