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The map label for this gene is ycfM [H]

Identifier: 71892176

GI number: 71892176

Start: 485989

End: 486525

Strand: Reverse

Name: ycfM [H]

Synonym: BPEN_409

Alternate gene names: 71892176

Gene position: 486525-485989 (Counterclockwise)

Preceding gene: 71892177

Following gene: 71892175

Centisome position: 61.46

GC content: 27.93

Gene sequence:

>537_bases
ATGATTGTAAATAAAAAAATAGTGTATCTATTTCTTAGTATGATTTTTTTAGATCATATTGGTTGGTGTGGCAATAATGT
GCCTATTTTGACGACAGAACCTACTTTATTAATACCACAAAAAATTAATTTAATTAATTGGCAACCGGTTTTATTAAGAA
TGCTGCAGAGTGTATTTTTTTTTGATAATATTGAACGTGATAGCGTATTATTAGTAAATATGGTAAAGAATAAAACTGAT
GGTATTTTGCAGGCCAGCAAAATTACGAATATTTTGATTAATTATATTGTAGAGAATACCAGAAAATATAATGTTATCGA
TATGGGAGTGCTGTATTCTGTGTATAGGGAATTAGGTATGTTGCCAGAAGATAATAGAAATTCTTATAGTTTTTCTATGA
AAATTGCAAATTATTTAAAAGCGAATTATATTTTGTATGGCATTGCTTATGGAGATGCATCTAAACCAAGTTTAGAATTG
CAATTAATATCCGTTAAAACCGGTGAGATTTTACGTGTTGTTAATAGTTCTGTATAG

Upstream 100 bases:

>100_bases
ATGAAGTGTGGTGCTTTTTATATCAAATGCATATAATTAAATAAAAAATTTAAAAAAAGTAATATTAAATTTTATTGTCG
ACAATAGAATTGTATATATT

Downstream 100 bases:

>100_bases
GGTATAAACAGTTCTAATAATATTGAGATGTTGGTAATTTAACAACTCTTTTAAGAGACTGATAAATATCATATTGAGAA
ATAATTCAGTTATTAAGATT

Product: putative fibronectin-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MIVNKKIVYLFLSMIFLDHIGWCGNNVPILTTEPTLLIPQKINLINWQPVLLRMLQSVFFFDNIERDSVLLVNMVKNKTD
GILQASKITNILINYIVENTRKYNVIDMGVLYSVYRELGMLPEDNRNSYSFSMKIANYLKANYILYGIAYGDASKPSLEL
QLISVKTGEILRVVNSSV

Sequences:

>Translated_178_residues
MIVNKKIVYLFLSMIFLDHIGWCGNNVPILTTEPTLLIPQKINLINWQPVLLRMLQSVFFFDNIERDSVLLVNMVKNKTD
GILQASKITNILINYIVENTRKYNVIDMGVLYSVYRELGMLPEDNRNSYSFSMKIANYLKANYILYGIAYGDASKPSLEL
QLISVKTGEILRVVNSSV
>Mature_178_residues
MIVNKKIVYLFLSMIFLDHIGWCGNNVPILTTEPTLLIPQKINLINWQPVLLRMLQSVFFFDNIERDSVLLVNMVKNKTD
GILQASKITNILINYIVENTRKYNVIDMGVLYSVYRELGMLPEDNRNSYSFSMKIANYLKANYILYGIAYGDASKPSLEL
QLISVKTGEILRVVNSSV

Specific function: Unknown

COG id: COG3417

COG function: function code R; Collagen-binding surface adhesin SpaP (antigen I/II family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787348, Length=161, Percent_Identity=31.055900621118, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014094 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20387; Mature: 20387

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVNKKIVYLFLSMIFLDHIGWCGNNVPILTTEPTLLIPQKINLINWQPVLLRMLQSVFF
CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEECCCCCCEECCCHHHHHHHHHHHH
FDNIERDSVLLVNMVKNKTDGILQASKITNILINYIVENTRKYNVIDMGVLYSVYRELGM
HCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCC
LPEDNRNSYSFSMKIANYLKANYILYGIAYGDASKPSLELQLISVKTGEILRVVNSSV
CCCCCCCCEEEEEHHHHHHHCCEEEEEEEECCCCCCCEEEEEEEECCCHHHHHHCCCC
>Mature Secondary Structure
MIVNKKIVYLFLSMIFLDHIGWCGNNVPILTTEPTLLIPQKINLINWQPVLLRMLQSVFF
CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEECCCCCCEECCCHHHHHHHHHHHH
FDNIERDSVLLVNMVKNKTDGILQASKITNILINYIVENTRKYNVIDMGVLYSVYRELGM
HCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCC
LPEDNRNSYSFSMKIANYLKANYILYGIAYGDASKPSLELQLISVKTGEILRVVNSSV
CCCCCCCCEEEEEHHHHHHHCCEEEEEEEECCCCCCCEEEEEEEECCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]