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The map label for this gene is ydhD [H]

Identifier: 71892145

GI number: 71892145

Start: 444788

End: 445120

Strand: Direct

Name: ydhD [H]

Synonym: BPEN_378

Alternate gene names: 71892145

Gene position: 444788-445120 (Clockwise)

Preceding gene: 71892144

Following gene: 71892147

Centisome position: 56.18

GC content: 31.53

Gene sequence:

>333_bases
ATGAACAATGCAATAGAAAAAATTAAAAATCAAATAAAAGAAAATCCTATCGTTTTATATATGAAAGGCACTCCTAGCGC
TCCTAAGTGTGGCTTTTCATCAAAAGCCGCACAAATATTATCTACTTATACTCAATCATTTTTTTACATTGACGTATTGA
TTCATGTAGATGTTAGAAACGCTCTGCCAATATTTTCTAATTGGCCTACTTTTCCTCAATTATGGATAGAAGGCAAATTA
ATAGGTGGGTCTGATATCATACTCAACATGAGTCACAGCGGTACACTAAAAACTCTAATTGATCAGGTAAAACTAAGACA
TAATTTAAATTGA

Upstream 100 bases:

>100_bases
ACGTTAAATCGTTAAATGCCCCATCTACATTAATAAAAATAATATTTACATAATTAAGCTTCATTAAAAGTATAATTTTA
ACTTTCAATACAAATAAAAC

Downstream 100 bases:

>100_bases
ATATTTTAACTCTCTTTTAAAGAGAGTTAAACCTTGTGTGTCTGTATAGTAGCTACTATACAGACACACAAAACCTAGAT
AAGTGTAATATGAAAACATA

Product: hypothetical protein

Products: NA

Alternate protein names: Grx4; Monothiol glutaredoxin [H]

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MNNAIEKIKNQIKENPIVLYMKGTPSAPKCGFSSKAAQILSTYTQSFFYIDVLIHVDVRNALPIFSNWPTFPQLWIEGKL
IGGSDIILNMSHSGTLKTLIDQVKLRHNLN

Sequences:

>Translated_110_residues
MNNAIEKIKNQIKENPIVLYMKGTPSAPKCGFSSKAAQILSTYTQSFFYIDVLIHVDVRNALPIFSNWPTFPQLWIEGKL
IGGSDIILNMSHSGTLKTLIDQVKLRHNLN
>Mature_110_residues
MNNAIEKIKNQIKENPIVLYMKGTPSAPKCGFSSKAAQILSTYTQSFFYIDVLIHVDVRNALPIFSNWPTFPQLWIEGKL
IGGSDIILNMSHSGTLKTLIDQVKLRHNLN

Specific function: Monothiol glutaredoxin involved in the biogenesis of iron-sulfur clusters [H]

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI95113651, Length=93, Percent_Identity=40.8602150537634, Blast_Score=87, Evalue=3e-18,
Organism=Homo sapiens, GI42516576, Length=92, Percent_Identity=36.9565217391304, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI1787943, Length=108, Percent_Identity=49.0740740740741, Blast_Score=132, Evalue=7e-33,
Organism=Caenorhabditis elegans, GI17556042, Length=97, Percent_Identity=34.020618556701, Blast_Score=84, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71988153, Length=76, Percent_Identity=40.7894736842105, Blast_Score=79, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI71988159, Length=76, Percent_Identity=40.7894736842105, Blast_Score=79, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6321022, Length=76, Percent_Identity=48.6842105263158, Blast_Score=86, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6325198, Length=100, Percent_Identity=39, Blast_Score=85, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6320303, Length=72, Percent_Identity=51.3888888888889, Blast_Score=84, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24642023, Length=85, Percent_Identity=40, Blast_Score=86, Evalue=4e-18,
Organism=Drosophila melanogaster, GI19921242, Length=95, Percent_Identity=34.7368421052632, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 12388; Mature: 12388

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNAIEKIKNQIKENPIVLYMKGTPSAPKCGFSSKAAQILSTYTQSFFYIDVLIHVDVRN
CCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEEEEECCC
ALPIFSNWPTFPQLWIEGKLIGGSDIILNMSHSGTLKTLIDQVKLRHNLN
CCCCCCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNNAIEKIKNQIKENPIVLYMKGTPSAPKCGFSSKAAQILSTYTQSFFYIDVLIHVDVRN
CCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEEEEECCC
ALPIFSNWPTFPQLWIEGKLIGGSDIILNMSHSGTLKTLIDQVKLRHNLN
CCCCCCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]