Definition | Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome. |
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Accession | NC_007292 |
Length | 791,654 |
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The map label for this gene is sufA [H]
Identifier: 71892137
GI number: 71892137
Start: 437376
End: 437756
Strand: Direct
Name: sufA [H]
Synonym: BPEN_369
Alternate gene names: 71892137
Gene position: 437376-437756 (Clockwise)
Preceding gene: 71892136
Following gene: 71892138
Centisome position: 55.25
GC content: 32.28
Gene sequence:
>381_bases ATGAAAAATGATATCACAAAAAATATACACTACATATCTACAAAACATGTTTCTTGGAATGGTCTAACACTAACTGATGC GGCAGCGCAACAAATTCTTCACTTAAAAAATAAAGACCCTAATATATTAGGATTAAAAGTAACCATAAAAAAATCAGGAT GTGCAGGATTTACATATCTCATGGATAAAGTTATATCACTAGATGATAATATCCTAATGTATGAACACAACGGCGCTAAA TTATTCGTGCCATTGTATGCCATGCCATTTATCGATGGAACCGAATTAGATTATGTGCGAGAAGGATTAAATCATATGTT TAAATTTAATAATCCTCAGGCTCAACATTCCTGTGGATGCGGTGAAAGTTTTAGCATTTAA
Upstream 100 bases:
>100_bases TGGCGTACACATTTTATACTTTTATAAATATTTATACAATCAAAACAATTGAGCATTTACTATGATAAAATGTTTCATAA CAAATTTAAAGGAATTTATC
Downstream 100 bases:
>100_bases AAACAGGTATTATTATGATACGCAATAACTCTAACATATATGATGTTAATAGAAATTTATCTAAAAATAATGATTCGTAT TATAAGGAAGGTTTTTTTAC
Product: Fe-S cluster assembly protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MKNDITKNIHYISTKHVSWNGLTLTDAAAQQILHLKNKDPNILGLKVTIKKSGCAGFTYLMDKVISLDDNILMYEHNGAK LFVPLYAMPFIDGTELDYVREGLNHMFKFNNPQAQHSCGCGESFSI
Sequences:
>Translated_126_residues MKNDITKNIHYISTKHVSWNGLTLTDAAAQQILHLKNKDPNILGLKVTIKKSGCAGFTYLMDKVISLDDNILMYEHNGAK LFVPLYAMPFIDGTELDYVREGLNHMFKFNNPQAQHSCGCGESFSI >Mature_126_residues MKNDITKNIHYISTKHVSWNGLTLTDAAAQQILHLKNKDPNILGLKVTIKKSGCAGFTYLMDKVISLDDNILMYEHNGAK LFVPLYAMPFIDGTELDYVREGLNHMFKFNNPQAQHSCGCGESFSI
Specific function: Unknown
COG id: COG0316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesB/iscA family [H]
Homologues:
Organism=Homo sapiens, GI52426768, Length=124, Percent_Identity=32.258064516129, Blast_Score=81, Evalue=2e-16, Organism=Homo sapiens, GI160420328, Length=108, Percent_Identity=35.1851851851852, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1787974, Length=109, Percent_Identity=59.6330275229358, Blast_Score=150, Evalue=2e-38, Organism=Escherichia coli, GI1788877, Length=106, Percent_Identity=39.622641509434, Blast_Score=91, Evalue=2e-20, Organism=Caenorhabditis elegans, GI25146411, Length=106, Percent_Identity=34.9056603773585, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193209025, Length=106, Percent_Identity=34.9056603773585, Blast_Score=71, Evalue=1e-13, Organism=Drosophila melanogaster, GI24642263, Length=109, Percent_Identity=39.4495412844037, Blast_Score=84, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000361 - InterPro: IPR016092 - InterPro: IPR017870 - InterPro: IPR011298 [H]
Pfam domain/function: PF01521 Fe-S_biosyn [H]
EC number: NA
Molecular weight: Translated: 14164; Mature: 14164
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: PS01152 HESB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNDITKNIHYISTKHVSWNGLTLTDAAAQQILHLKNKDPNILGLKVTIKKSGCAGFTYL CCCCCCCCEEEEEECEECCCCEEECHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHH MDKVISLDDNILMYEHNGAKLFVPLYAMPFIDGTELDYVREGLNHMFKFNNPQAQHSCGC HHHHHCCCCCEEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC GESFSI CCCCCC >Mature Secondary Structure MKNDITKNIHYISTKHVSWNGLTLTDAAAQQILHLKNKDPNILGLKVTIKKSGCAGFTYL CCCCCCCCEEEEEECEECCCCEEECHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHH MDKVISLDDNILMYEHNGAKLFVPLYAMPFIDGTELDYVREGLNHMFKFNNPQAQHSCGC HHHHHCCCCCEEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC GESFSI CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 10322040 [H]