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The map label for this gene is sufB [H]

Identifier: 71892138

GI number: 71892138

Start: 437771

End: 439267

Strand: Direct

Name: sufB [H]

Synonym: BPEN_370

Alternate gene names: 71892138

Gene position: 437771-439267 (Clockwise)

Preceding gene: 71892137

Following gene: 71892139

Centisome position: 55.3

GC content: 31.73

Gene sequence:

>1497_bases
ATGATACGCAATAACTCTAACATATATGATGTTAATAGAAATTTATCTAAAAATAATGATTCGTATTATAAGGAAGGTTT
TTTTACTAAATTAAATAATGAAGAGCTCAAAAAAGGTATTAATAAAGATATAATATATGCTATTTCACAAAAAAGATTAG
AACCAAAATGGATGCTAGAATTTAGGCTTGCAGGTTATAATGCTTGGTGTAATATGAAAGAACCGCATTGGTTAAAAGGA
AATTATCAAAAACTCAACTATAATTCCTATAGCTATTTTTCTGCTCCAGCATGTGCAACTACACAAAAAACCCACAAAGT
GCAAAAAAATACAAATACTCTCTTAAATAAATCAAAATACTTAACCACAGAAGTAGAACAAACCTTTAACAAATTAGGCA
TCCCAGTTCATGAAAAAGGAAACGTAGCGGTTGATGCAATATTTGATTCAGTTTCTGTATCTACTACATTCCGTAATACC
TTACTAAAAAAAGGTATCATTTTTTGTTCATTTCACGATGCTATTCAAGATTACCCAGATTTGGTACGCCAATATTTAGG
AACTGTAGTATCTTTTAAAGATAATTTTTTTGCCGCACTTAATGCTGCAGTTGTATCTGATGGTACATTTGTATACATTC
CTAAAAATGTACGCTGTCCTATGGAATTATCAACTTACTTTCGTATGAATTCTAAAAAAACCGGACAATTTGAACGTACT
ATTTTAATTGCAGATACAGGTAGTTATGTGAGCTATATTGAAGGATGTTCAGCTCCAATGCACAATAATTATCAACTTCA
CGCAGCAGTCGTAGAAGTTATCGTACTAAAAGATGCTCAAGTAAAATATTCAACGGTACAAAATTGGTTTTCTGGTAATC
AAAACTCTCAAGGTGGCATTTTAAACTTCGTTACTAAGCGAGCGCTATGTTCTGGAGAAAATGCTAAAATGTCGTGGACT
CAATCTGAATCTGGATCTGCTATCACTTGGAAATATCCTAGTGTAATTTTAAAAGGAAAAAACTCTATTGGAGAATTTTT
TTCAGTAGCTGTTACCAACGGTACACAACAAGCAGATACTGGAACAAAAATGATTCATATAGGAGAAAATACACGTTCAA
CCATTATTTCAAAAGGCATTGCTCTTGGAAACAGCCAAAATACTTATCGAGGATTAGTTAAAATTATGAAAACTGCTTCA
AATTCACGCAATTTTACACAGTGTGATTCTATGTTGATAGGTAAAAAATGTAGTTCTCATACCTTTCCTGTCATTGAATC
ACATAATAATCATTCACAGTTAGAACATGAAGCTACAACTTCACGTATCAGCGATAATCAACTGTTTTATTGTCGGCAAC
GCGGAATTAATGAAGATGATGCTATTTCTATGATTGTAAATGGATTTTGCAAGGATATATTTTCTAAATTACCTTTAGAA
TTTTCTGTAGAAGCACAAAAATTACTAGAAATTACTTTAGAGCACAGCGTTGGATAA

Upstream 100 bases:

>100_bases
TGCGAGAAGGATTAAATCATATGTTTAAATTTAATAATCCTCAGGCTCAACATTCCTGTGGATGCGGTGAAAGTTTTAGC
ATTTAAAAACAGGTATTATT

Downstream 100 bases:

>100_bases
AATTTATAATATAAGTACTTGCAATAATCATAGCATTCAAAACAGGAGAAGTCATGATGCTATTAGTAAAAAATTTGAAT
GTCAGCGTAAAAAATATATC

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 498; Mature: 498

Protein sequence:

>498_residues
MIRNNSNIYDVNRNLSKNNDSYYKEGFFTKLNNEELKKGINKDIIYAISQKRLEPKWMLEFRLAGYNAWCNMKEPHWLKG
NYQKLNYNSYSYFSAPACATTQKTHKVQKNTNTLLNKSKYLTTEVEQTFNKLGIPVHEKGNVAVDAIFDSVSVSTTFRNT
LLKKGIIFCSFHDAIQDYPDLVRQYLGTVVSFKDNFFAALNAAVVSDGTFVYIPKNVRCPMELSTYFRMNSKKTGQFERT
ILIADTGSYVSYIEGCSAPMHNNYQLHAAVVEVIVLKDAQVKYSTVQNWFSGNQNSQGGILNFVTKRALCSGENAKMSWT
QSESGSAITWKYPSVILKGKNSIGEFFSVAVTNGTQQADTGTKMIHIGENTRSTIISKGIALGNSQNTYRGLVKIMKTAS
NSRNFTQCDSMLIGKKCSSHTFPVIESHNNHSQLEHEATTSRISDNQLFYCRQRGINEDDAISMIVNGFCKDIFSKLPLE
FSVEAQKLLEITLEHSVG

Sequences:

>Translated_498_residues
MIRNNSNIYDVNRNLSKNNDSYYKEGFFTKLNNEELKKGINKDIIYAISQKRLEPKWMLEFRLAGYNAWCNMKEPHWLKG
NYQKLNYNSYSYFSAPACATTQKTHKVQKNTNTLLNKSKYLTTEVEQTFNKLGIPVHEKGNVAVDAIFDSVSVSTTFRNT
LLKKGIIFCSFHDAIQDYPDLVRQYLGTVVSFKDNFFAALNAAVVSDGTFVYIPKNVRCPMELSTYFRMNSKKTGQFERT
ILIADTGSYVSYIEGCSAPMHNNYQLHAAVVEVIVLKDAQVKYSTVQNWFSGNQNSQGGILNFVTKRALCSGENAKMSWT
QSESGSAITWKYPSVILKGKNSIGEFFSVAVTNGTQQADTGTKMIHIGENTRSTIISKGIALGNSQNTYRGLVKIMKTAS
NSRNFTQCDSMLIGKKCSSHTFPVIESHNNHSQLEHEATTSRISDNQLFYCRQRGINEDDAISMIVNGFCKDIFSKLPLE
FSVEAQKLLEITLEHSVG
>Mature_498_residues
MIRNNSNIYDVNRNLSKNNDSYYKEGFFTKLNNEELKKGINKDIIYAISQKRLEPKWMLEFRLAGYNAWCNMKEPHWLKG
NYQKLNYNSYSYFSAPACATTQKTHKVQKNTNTLLNKSKYLTTEVEQTFNKLGIPVHEKGNVAVDAIFDSVSVSTTFRNT
LLKKGIIFCSFHDAIQDYPDLVRQYLGTVVSFKDNFFAALNAAVVSDGTFVYIPKNVRCPMELSTYFRMNSKKTGQFERT
ILIADTGSYVSYIEGCSAPMHNNYQLHAAVVEVIVLKDAQVKYSTVQNWFSGNQNSQGGILNFVTKRALCSGENAKMSWT
QSESGSAITWKYPSVILKGKNSIGEFFSVAVTNGTQQADTGTKMIHIGENTRSTIISKGIALGNSQNTYRGLVKIMKTAS
NSRNFTQCDSMLIGKKCSSHTFPVIESHNNHSQLEHEATTSRISDNQLFYCRQRGINEDDAISMIVNGFCKDIFSKLPLE
FSVEAQKLLEITLEHSVG

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=476, Percent_Identity=71.218487394958, Blast_Score=734, Evalue=0.0,
Organism=Escherichia coli, GI1787971, Length=153, Percent_Identity=29.4117647058824, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 56152; Mature: 56152

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRNNSNIYDVNRNLSKNNDSYYKEGFFTKLNNEELKKGINKDIIYAISQKRLEPKWMLE
CCCCCCCEEECCCCCCCCCCCHHHCCCEEECCHHHHHCCCCHHEEEEEHHHCCCCCEEEE
FRLAGYNAWCNMKEPHWLKGNYQKLNYNSYSYFSAPACATTQKTHKVQKNTNTLLNKSKY
EEEECEEEECCCCCCCCCCCCCEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCHH
LTTEVEQTFNKLGIPVHEKGNVAVDAIFDSVSVSTTFRNTLLKKGIIFCSFHDAIQDYPD
HHHHHHHHHHHCCCCEECCCCEEEEEEECCCCHHHHHHHHHHHCCEEEEEHHHHHHHHHH
LVRQYLGTVVSFKDNFFAALNAAVVSDGTFVYIPKNVRCPMELSTYFRMNSKKTGQFERT
HHHHHHHHHHHCCCCHHHHHHHHEECCCEEEEECCCCCCCHHHHHHEEECCCCCCCEEEE
ILIADTGSYVSYIEGCSAPMHNNYQLHAAVVEVIVLKDAQVKYSTVQNWFSGNQNSQGGI
EEEEECCCHHHHHHCCCCCCCCCEEEHHHHEEEHEECCCCCHHHHHHHHHCCCCCCCCCH
LNFVTKRALCSGENAKMSWTQSESGSAITWKYPSVILKGKNSIGEFFSVAVTNGTQQADT
HHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCEEEEECCCCCCCEEEEEEECCCCCCCC
GTKMIHIGENTRSTIISKGIALGNSQNTYRGLVKIMKTASNSRNFTQCDSMLIGKKCSSH
CCEEEEECCCCHHHHHHHCEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
TFPVIESHNNHSQLEHEATTSRISDNQLFYCRQRGINEDDAISMIVNGFCKDIFSKLPLE
CCCEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCE
FSVEAQKLLEITLEHSVG
EECCHHHHHHHHHHCCCC
>Mature Secondary Structure
MIRNNSNIYDVNRNLSKNNDSYYKEGFFTKLNNEELKKGINKDIIYAISQKRLEPKWMLE
CCCCCCCEEECCCCCCCCCCCHHHCCCEEECCHHHHHCCCCHHEEEEEHHHCCCCCEEEE
FRLAGYNAWCNMKEPHWLKGNYQKLNYNSYSYFSAPACATTQKTHKVQKNTNTLLNKSKY
EEEECEEEECCCCCCCCCCCCCEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCHH
LTTEVEQTFNKLGIPVHEKGNVAVDAIFDSVSVSTTFRNTLLKKGIIFCSFHDAIQDYPD
HHHHHHHHHHHCCCCEECCCCEEEEEEECCCCHHHHHHHHHHHCCEEEEEHHHHHHHHHH
LVRQYLGTVVSFKDNFFAALNAAVVSDGTFVYIPKNVRCPMELSTYFRMNSKKTGQFERT
HHHHHHHHHHHCCCCHHHHHHHHEECCCEEEEECCCCCCCHHHHHHEEECCCCCCCEEEE
ILIADTGSYVSYIEGCSAPMHNNYQLHAAVVEVIVLKDAQVKYSTVQNWFSGNQNSQGGI
EEEEECCCHHHHHHCCCCCCCCCEEEHHHHEEEHEECCCCCHHHHHHHHHCCCCCCCCCH
LNFVTKRALCSGENAKMSWTQSESGSAITWKYPSVILKGKNSIGEFFSVAVTNGTQQADT
HHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCEEEEECCCCCCCEEEEEEECCCCCCCC
GTKMIHIGENTRSTIISKGIALGNSQNTYRGLVKIMKTASNSRNFTQCDSMLIGKKCSSH
CCEEEEECCCCHHHHHHHCEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
TFPVIESHNNHSQLEHEATTSRISDNQLFYCRQRGINEDDAISMIVNGFCKDIFSKLPLE
CCCEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCE
FSVEAQKLLEITLEHSVG
EECCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 10322040 [H]