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The map label for this gene is ybgF [H]

Identifier: 71892118

GI number: 71892118

Start: 413906

End: 414691

Strand: Direct

Name: ybgF [H]

Synonym: BPEN_350

Alternate gene names: 71892118

Gene position: 413906-414691 (Clockwise)

Preceding gene: 71892117

Following gene: 71892120

Centisome position: 52.28

GC content: 28.12

Gene sequence:

>786_bases
ATGCTTAAGTATATACTATTTCTATGTAAATTAAATATAATCATCATAATGATGATATATTTTAATATTACAAATAATAA
TATTGTATATGCTAAAGATGTAAATCATAAGATAGATACCAATCAACGTATTAATCAATTACATCAGATATATGACGCAC
ATAGTCAATGCTTAATTCAAATGCAACAGCAATTAGCTGAAAATCAACGAGATATTGATATCTTGCGTGGACATATTCAA
GATATGCAACATCATATATCAGAAATTATAAATAACCAATCAGCATCACCTCAACATACTAATAATATTTCAAATAAACG
TAACATACACTATTCTAACAATATTCCTGATAAATTATCTAGTCACTCAAACATTCAAAGACCAAAAAAAACAAATAATG
CAATGATAATAGATGTAGATACTGCGTATAAACAAGCAGTATCATTAGTATTAGAAAAAAAACAATATAATCAAGCAATA
GAAGCTTTCCAGAATTTCATAAGAAACCATCCAGAATCAATTTACCAATCAAATTCGCATTATTGGCTAGGACAGCTTTA
CTACAACAAAGGCAACAAACATGACGCTGCTCGGCATTTTGCATTAGTCGTAAAGAATTATCCTAAATCATTAAAAGCAT
CAGATGCATTATTAAAAATCGGTATTATCATGCAAGAAACAGAACAAAAAGACAAAGCCAAAACAATATATAAAAAAGTA
GGCAAATTATATCCTAACAGCAATGCAGCAAAACAAGCTCAAAAACGTCTAATACACCTATCATAA

Upstream 100 bases:

>100_bases
ACTATATCTTATGGTAAAGAAAAACCAGCTGTATTAGGACAAAACGAAGAAGCTTACTCTAAAAATAGACGCGTTGTATT
AATATATAAATAATATTCAT

Downstream 100 bases:

>100_bases
TAATGAATTATTGTTCAAAATAAATCTTTTATCTTTCATACATTAAAGAATACAAAACAAATAAAATTTACTAGAATTTT
TAATTCTAGTAAACATAAAG

Product: putative periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MLKYILFLCKLNIIIIMMIYFNITNNNIVYAKDVNHKIDTNQRINQLHQIYDAHSQCLIQMQQQLAENQRDIDILRGHIQ
DMQHHISEIINNQSASPQHTNNISNKRNIHYSNNIPDKLSSHSNIQRPKKTNNAMIIDVDTAYKQAVSLVLEKKQYNQAI
EAFQNFIRNHPESIYQSNSHYWLGQLYYNKGNKHDAARHFALVVKNYPKSLKASDALLKIGIIMQETEQKDKAKTIYKKV
GKLYPNSNAAKQAQKRLIHLS

Sequences:

>Translated_261_residues
MLKYILFLCKLNIIIIMMIYFNITNNNIVYAKDVNHKIDTNQRINQLHQIYDAHSQCLIQMQQQLAENQRDIDILRGHIQ
DMQHHISEIINNQSASPQHTNNISNKRNIHYSNNIPDKLSSHSNIQRPKKTNNAMIIDVDTAYKQAVSLVLEKKQYNQAI
EAFQNFIRNHPESIYQSNSHYWLGQLYYNKGNKHDAARHFALVVKNYPKSLKASDALLKIGIIMQETEQKDKAKTIYKKV
GKLYPNSNAAKQAQKRLIHLS
>Mature_261_residues
MLKYILFLCKLNIIIIMMIYFNITNNNIVYAKDVNHKIDTNQRINQLHQIYDAHSQCLIQMQQQLAENQRDIDILRGHIQ
DMQHHISEIINNQSASPQHTNNISNKRNIHYSNNIPDKLSSHSNIQRPKKTNNAMIIDVDTAYKQAVSLVLEKKQYNQAI
EAFQNFIRNHPESIYQSNSHYWLGQLYYNKGNKHDAARHFALVVKNYPKSLKASDALLKIGIIMQETEQKDKAKTIYKKV
GKLYPNSNAAKQAQKRLIHLS

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786963, Length=225, Percent_Identity=44.4444444444444, Blast_Score=179, Evalue=2e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014162
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30405; Mature: 30405

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKYILFLCKLNIIIIMMIYFNITNNNIVYAKDVNHKIDTNQRINQLHQIYDAHSQCLIQ
CHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
MQQQLAENQRDIDILRGHIQDMQHHISEIINNQSASPQHTNNISNKRNIHYSNNIPDKLS
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCHHHH
SHSNIQRPKKTNNAMIIDVDTAYKQAVSLVLEKKQYNQAIEAFQNFIRNHPESIYQSNSH
CCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCC
YWLGQLYYNKGNKHDAARHFALVVKNYPKSLKASDALLKIGIIMQETEQKDKAKTIYKKV
EEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKLYPNSNAAKQAQKRLIHLS
HHCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MLKYILFLCKLNIIIIMMIYFNITNNNIVYAKDVNHKIDTNQRINQLHQIYDAHSQCLIQ
CHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
MQQQLAENQRDIDILRGHIQDMQHHISEIINNQSASPQHTNNISNKRNIHYSNNIPDKLS
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCHHHH
SHSNIQRPKKTNNAMIIDVDTAYKQAVSLVLEKKQYNQAIEAFQNFIRNHPESIYQSNSH
CCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCC
YWLGQLYYNKGNKHDAARHFALVVKNYPKSLKASDALLKIGIIMQETEQKDKAKTIYKKV
EEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKLYPNSNAAKQAQKRLIHLS
HHCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1574003; 8905232; 9278503; 7567469 [H]