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The map label for this gene is cyoD [H]

Identifier: 71892023

GI number: 71892023

Start: 281398

End: 281700

Strand: Reverse

Name: cyoD [H]

Synonym: BPEN_249

Alternate gene names: 71892023

Gene position: 281700-281398 (Counterclockwise)

Preceding gene: 71892024

Following gene: 71892022

Centisome position: 35.58

GC content: 23.1

Gene sequence:

>303_bases
ATGAAGAATGGTTATACACAGAAGTCATATTTAATTGGGTTTGTATTGTCTTTGGTTTTGACAATCGTTCCATTTTTTAT
GGTTACACATGACACAATAAATAAAAAAATATTAATAAATATTATTGTATTTTGCTCAATAATGCAGATTATTATTCATT
TAATTTTCTTTTTACATTTAGGAAATGTATCTAATCAAGCATGGAATTTAATATCTTTAATATTCACAATATTTATTGTT
TTTATCCTTGTGTTAGGAAGTGTATGGATTATGACACATTTACATCATAATTTGATGATTTAA

Upstream 100 bases:

>100_bases
CTATATACGAATGCAATGTTTAAGTTTATTTTGGCATTTTCTTGATGTTATATGGATATGTGTATTTACTGAGGTATATT
TACTGGGAGTACTATAATTA

Downstream 100 bases:

>100_bases
ATAAGATAGTTTAATTGTTATGATTAAATATTATTTATACTTAACAAAACCAGGAATTGTTTTAGGTAATTTAATGTCAT
CTGCAGGAGGATTTTTAATC

Product: cytochrome o ubiquinol oxidase, subunit IV

Products: Ubiquinone-8; H2O [C]

Alternate protein names: Ubiquinol oxidase chain D [H]

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MKNGYTQKSYLIGFVLSLVLTIVPFFMVTHDTINKKILINIIVFCSIMQIIIHLIFFLHLGNVSNQAWNLISLIFTIFIV
FILVLGSVWIMTHLHHNLMI

Sequences:

>Translated_100_residues
MKNGYTQKSYLIGFVLSLVLTIVPFFMVTHDTINKKILINIIVFCSIMQIIIHLIFFLHLGNVSNQAWNLISLIFTIFIV
FILVLGSVWIMTHLHHNLMI
>Mature_100_residues
MKNGYTQKSYLIGFVLSLVLTIVPFFMVTHDTINKKILINIIVFCSIMQIIIHLIFFLHLGNVSNQAWNLISLIFTIFIV
FILVLGSVWIMTHLHHNLMI

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG3125

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 4

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit 4 family [H]

Homologues:

Organism=Escherichia coli, GI1786632, Length=93, Percent_Identity=38.7096774193548, Blast_Score=89, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005171
- InterPro:   IPR014210 [H]

Pfam domain/function: PF03626 COX4_pro [H]

EC number: NA

Molecular weight: Translated: 11586; Mature: 11586

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNGYTQKSYLIGFVLSLVLTIVPFFMVTHDTINKKILINIIVFCSIMQIIIHLIFFLHL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GNVSNQAWNLISLIFTIFIVFILVLGSVWIMTHLHHNLMI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNGYTQKSYLIGFVLSLVLTIVPFFMVTHDTINKKILINIIVFCSIMQIIIHLIFFLHL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GNVSNQAWNLISLIFTIFIVFILVLGSVWIMTHLHHNLMI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Ubiquinol-8; O(2) [C]

Specific reaction: Ubiquinol-8 + O(2) = Ubiquinone-8 + H2O [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]