Click here to switch to the map view.

The map label for this gene is cyoC [H]

Identifier: 71892024

GI number: 71892024

Start: 281704

End: 282291

Strand: Reverse

Name: cyoC [H]

Synonym: BPEN_250

Alternate gene names: 71892024

Gene position: 282291-281704 (Counterclockwise)

Preceding gene: 71892025

Following gene: 71892023

Centisome position: 35.66

GC content: 28.06

Gene sequence:

>588_bases
TTGAATGTGTTAATAATGTATAAACATAATAATTTAAATATAAAGACAATATTTGGTTTCTGGTTATACATAATGAGTGA
TTGTATTCTATTCGCAAGTTTATTTGCAATATACTCTGTGTTATGTAATAACACAGCAGATTGTTCTTCAGGTAAAGATA
TATTTTCATTACCTTTTGTGTTTATAGAAACTTGTTGTTTATTATTGAGTAGTCTTACTCATTGTAAAGTTATGATATAC
GTAGAAAAATCATGTACGAAACAAATAAATATTTGGATGGGAATAACTTTTTTATTAGGACTATGTTTTATTAGTATGGA
GATCTATGAATTTTATCATTTAATTAAATTAGGAAACAATCCATGTCGCAGTGCATTTCTTTCTTCTTTTTTTACTTTAG
TTGGGACCCATGGTCTACATGTGATGGCGGGCCTTATTTGGATTGCGGTAATGATTATACATATTGTGTATCAAGGATTG
ACATACACCAACTATATACGAATGCAATGTTTAAGTTTATTTTGGCATTTTCTTGATGTTATATGGATATGTGTATTTAC
TGAGGTATATTTACTGGGAGTACTATAA

Upstream 100 bases:

>100_bases
CTCGTTGTTTTTAGTATGTTTGGAATAATAGCAACTTGGATTCTTCATACATTTAATGATGATACAGAATATTACGTACC
AGTAGAGAAAATTAAAGAAA

Downstream 100 bases:

>100_bases
TTAATGAAGAATGGTTATACACAGAAGTCATATTTAATTGGGTTTGTATTGTCTTTGGTTTTGACAATCGTTCCATTTTT
TATGGTTACACATGACACAA

Product: cytochrome o ubiquinol oxidase, subunit III

Products: NA

Alternate protein names: Cytochrome o ubiquinol oxidase subunit III [H]

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MNVLIMYKHNNLNIKTIFGFWLYIMSDCILFASLFAIYSVLCNNTADCSSGKDIFSLPFVFIETCCLLLSSLTHCKVMIY
VEKSCTKQINIWMGITFLLGLCFISMEIYEFYHLIKLGNNPCRSAFLSSFFTLVGTHGLHVMAGLIWIAVMIIHIVYQGL
TYTNYIRMQCLSLFWHFLDVIWICVFTEVYLLGVL

Sequences:

>Translated_195_residues
MNVLIMYKHNNLNIKTIFGFWLYIMSDCILFASLFAIYSVLCNNTADCSSGKDIFSLPFVFIETCCLLLSSLTHCKVMIY
VEKSCTKQINIWMGITFLLGLCFISMEIYEFYHLIKLGNNPCRSAFLSSFFTLVGTHGLHVMAGLIWIAVMIIHIVYQGL
TYTNYIRMQCLSLFWHFLDVIWICVFTEVYLLGVL
>Mature_195_residues
MNVLIMYKHNNLNIKTIFGFWLYIMSDCILFASLFAIYSVLCNNTADCSSGKDIFSLPFVFIETCCLLLSSLTHCKVMIY
VEKSCTKQINIWMGITFLLGLCFISMEIYEFYHLIKLGNNPCRSAFLSSFFTLVGTHGLHVMAGLIWIAVMIIHIVYQGL
TYTNYIRMQCLSLFWHFLDVIWICVFTEVYLLGVL

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at high aeration [H]

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786633, Length=189, Percent_Identity=57.6719576719577, Blast_Score=228, Evalue=2e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000298
- InterPro:   IPR013833
- InterPro:   IPR014206 [H]

Pfam domain/function: PF00510 COX3 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 22521; Mature: 22521

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
10.3 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
10.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLIMYKHNNLNIKTIFGFWLYIMSDCILFASLFAIYSVLCNNTADCSSGKDIFSLPFV
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
FIETCCLLLSSLTHCKVMIYVEKSCTKQINIWMGITFLLGLCFISMEIYEFYHLIKLGNN
HHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PCRSAFLSSFFTLVGTHGLHVMAGLIWIAVMIIHIVYQGLTYTNYIRMQCLSLFWHFLDV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IWICVFTEVYLLGVL
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MNVLIMYKHNNLNIKTIFGFWLYIMSDCILFASLFAIYSVLCNNTADCSSGKDIFSLPFV
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
FIETCCLLLSSLTHCKVMIYVEKSCTKQINIWMGITFLLGLCFISMEIYEFYHLIKLGNN
HHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PCRSAFLSSFFTLVGTHGLHVMAGLIWIAVMIIHIVYQGLTYTNYIRMQCLSLFWHFLDV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IWICVFTEVYLLGVL
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]