Definition | Corynebacterium jeikeium K411, complete genome. |
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Accession | NC_007164 |
Length | 2,462,499 |
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The map label for this gene is 68536055
Identifier: 68536055
GI number: 68536055
Start: 1157810
End: 1158877
Strand: Direct
Name: 68536055
Synonym: jk0978
Alternate gene names: NA
Gene position: 1157810-1158877 (Clockwise)
Preceding gene: 68536053
Following gene: 68536063
Centisome position: 47.02
GC content: 64.79
Gene sequence:
>1068_bases GTGACCCAGCGGCTCGCGCTTAAAGGCCTCGGACCAGCCGGTGCGATTCTAGCCATTCGAGCTGCACAGCGCGGCTTCCA CGTCACCGCCTATGATCCGGCCTTCGACGACCACAGCTCTTCCCCCTTCCCCGGCACCTATGGGGTGTTCTCCACGCAGA TACCCTCCTGGGCCGATCACTTGTTTGGCCCACCAGAATCTTTGGAGGTCGTCGCGGGCACTCCCCTCACCCGCCGCACC CTCGGATTTAGCTATCGGATGCTGAACCAGGAGGCGGTAGTCGAAGCACTGAGAAGCTCGGGCGTGCGCATCAAACCTGA GCGCCTTCCCAATGGTGTGGAGGCCATCGACTGCACCGGCGCCCCACGTACGGACGCCGCACTGTGGCAACTGGCTGTCG GATGGTTCTTGCCTTTTGGTGACGCCCCTTCAGAATCCACCCCCACCTTCATGGATTGGACCGGGACGGTTGCCCAGGCC GGGGTTTGCCCGCCCAGCTTCTGCTACGTCCAGCGCACGGACGAGGGCTGGCTGTACGAGGAGACGATCCTGGCAGCGCA CTGCAGCGCCGATGTGGCGAAACAGGAAGAAGTGTTCGAGGTTCTGCGGGCGCGCCTAGCAGACCGCATAGGCAACCAGA CGGTAGTGCGCGAAGAACGGGTCGCGATCCCGATGGGGACCAGGCGGCGTCATAAAGAAAGAAAGTTCGGTGCCGCGGCG GGCTTTATCAATCCCGCGACGGGCTACTCGCTGGGGCACGCTCTGGAGGCTGCCGACGGTTTTCTGGACGGCAACCGCAG CGGCGGGTGGCTGGCGTATGTACTGCGGCAAGTCGGTGGGGAGCTCATCGCCCGAGCCGATGGCGCCACGCTACAGGACT TCTTCGGGCACTTCTTTGCCCTGGACACGCGGAGGCAGCTGGCGTATTTGAGCGGGCGCGACGGGCTGGCCGTGGCACGC ACGATGTGGGCGCTAAGGGAGGGAACCGGGCTGCGCCACGAGTTCCTCCGTCCCCTATTCCGCCGCCCCTGTTCAGTGGG CCGGGCGGTGTGGCAGAGGCTGTTCTAG
Upstream 100 bases:
>100_bases TGTAGCTAATGCATTAAGCCGCAAAAATTTCCTAAAGAAGTGATGAGTAAAACACGGCTGTGTAAGTTCGGGGGTAAGAA TCCTGAATCGGAGGTTTAAA
Downstream 100 bases:
>100_bases GGCTAGACCGTGAAGCCGAGGAAACGCAGCTGCTCGCGGCCTTCCTCGTTGATCATGTGCGGGCCCCAGGCCGGGGTCCA CACCCAGTTGATTTGCAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Lycopene Beta And Epsilon Cyclase; Lycopene Cyclase; Lycopene Cyclase Family Protein; Lycopene Beta Cyclase
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MTQRLALKGLGPAGAILAIRAAQRGFHVTAYDPAFDDHSSSPFPGTYGVFSTQIPSWADHLFGPPESLEVVAGTPLTRRT LGFSYRMLNQEAVVEALRSSGVRIKPERLPNGVEAIDCTGAPRTDAALWQLAVGWFLPFGDAPSESTPTFMDWTGTVAQA GVCPPSFCYVQRTDEGWLYEETILAAHCSADVAKQEEVFEVLRARLADRIGNQTVVREERVAIPMGTRRRHKERKFGAAA GFINPATGYSLGHALEAADGFLDGNRSGGWLAYVLRQVGGELIARADGATLQDFFGHFFALDTRRQLAYLSGRDGLAVAR TMWALREGTGLRHEFLRPLFRRPCSVGRAVWQRLF
Sequences:
>Translated_355_residues MTQRLALKGLGPAGAILAIRAAQRGFHVTAYDPAFDDHSSSPFPGTYGVFSTQIPSWADHLFGPPESLEVVAGTPLTRRT LGFSYRMLNQEAVVEALRSSGVRIKPERLPNGVEAIDCTGAPRTDAALWQLAVGWFLPFGDAPSESTPTFMDWTGTVAQA GVCPPSFCYVQRTDEGWLYEETILAAHCSADVAKQEEVFEVLRARLADRIGNQTVVREERVAIPMGTRRRHKERKFGAAA GFINPATGYSLGHALEAADGFLDGNRSGGWLAYVLRQVGGELIARADGATLQDFFGHFFALDTRRQLAYLSGRDGLAVAR TMWALREGTGLRHEFLRPLFRRPCSVGRAVWQRLF >Mature_354_residues TQRLALKGLGPAGAILAIRAAQRGFHVTAYDPAFDDHSSSPFPGTYGVFSTQIPSWADHLFGPPESLEVVAGTPLTRRTL GFSYRMLNQEAVVEALRSSGVRIKPERLPNGVEAIDCTGAPRTDAALWQLAVGWFLPFGDAPSESTPTFMDWTGTVAQAG VCPPSFCYVQRTDEGWLYEETILAAHCSADVAKQEEVFEVLRARLADRIGNQTVVREERVAIPMGTRRRHKERKFGAAAG FINPATGYSLGHALEAADGFLDGNRSGGWLAYVLRQVGGELIARADGATLQDFFGHFFALDTRRQLAYLSGRDGLAVART MWALREGTGLRHEFLRPLFRRPCSVGRAVWQRLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38987; Mature: 38855
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQRLALKGLGPAGAILAIRAAQRGFHVTAYDPAFDDHSSSPFPGTYGVFSTQIPSWADH CCCCEEECCCCCCHHHHHEEHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHH LFGPPESLEVVAGTPLTRRTLGFSYRMLNQEAVVEALRSSGVRIKPERLPNGVEAIDCTG HCCCCCCCEEEECCCCHHHHHCHHHHHHCHHHHHHHHHHCCCEEEHHHCCCCCCEEECCC APRTDAALWQLAVGWFLPFGDAPSESTPTFMDWTGTVAQAGVCPPSFCYVQRTDEGWLYE CCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHCCCCCCCEEEEEECCCCCEEH ETILAAHCSADVAKQEEVFEVLRARLADRIGNQTVVREERVAIPMGTRRRHKERKFGAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEECCCCHHHHHHHHHHHHHC GFINPATGYSLGHALEAADGFLDGNRSGGWLAYVLRQVGGELIARADGATLQDFFGHFFA CCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHH LDTRRQLAYLSGRDGLAVARTMWALREGTGLRHEFLRPLFRRPCSVGRAVWQRLF HCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure TQRLALKGLGPAGAILAIRAAQRGFHVTAYDPAFDDHSSSPFPGTYGVFSTQIPSWADH CCCEEECCCCCCHHHHHEEHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHH LFGPPESLEVVAGTPLTRRTLGFSYRMLNQEAVVEALRSSGVRIKPERLPNGVEAIDCTG HCCCCCCCEEEECCCCHHHHHCHHHHHHCHHHHHHHHHHCCCEEEHHHCCCCCCEEECCC APRTDAALWQLAVGWFLPFGDAPSESTPTFMDWTGTVAQAGVCPPSFCYVQRTDEGWLYE CCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHCCCCCCCEEEEEECCCCCEEH ETILAAHCSADVAKQEEVFEVLRARLADRIGNQTVVREERVAIPMGTRRRHKERKFGAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEECCCCHHHHHHHHHHHHHC GFINPATGYSLGHALEAADGFLDGNRSGGWLAYVLRQVGGELIARADGATLQDFFGHFFA CCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHH LDTRRQLAYLSGRDGLAVARTMWALREGTGLRHEFLRPLFRRPCSVGRAVWQRLF HCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA