Definition | Corynebacterium jeikeium K411, complete genome. |
---|---|
Accession | NC_007164 |
Length | 2,462,499 |
Click here to switch to the map view.
The map label for this gene is 68535993
Identifier: 68535993
GI number: 68535993
Start: 1093770
End: 1095449
Strand: Direct
Name: 68535993
Synonym: jk0916
Alternate gene names: NA
Gene position: 1093770-1095449 (Clockwise)
Preceding gene: 68535992
Following gene: 68535994
Centisome position: 44.42
GC content: 64.29
Gene sequence:
>1680_bases GTGACTACTCCCACGAACCCCGATGTCATCATTGTCGGCGCCGGCCTGGCCGGCCTCGTCGCCGCCTACGAGGCGCAGAA GTCGGGTCTGAAGGTCCTGATCCTGGACCAGGAAAACCGTAACAACCTGGGCGGACAGGCCTTCTGGTCGCTCGGTGGCC TGTTCTATGTGGGAAGCCCCGAGCAGAAGCTGATGGGAGTCAAGGATTCCGAGGAGCTCGCTTGGCGCGACTGGGAAAAC TCCGCGCAGTTCGACGATTCCCAGAACGATTACTGGCCGCGCCGCTGGGGCCGCGAGTACGTCCGCTTCGCAGCCACTGA GAAGCGCGACTACCTCAAGGCTCTCGGCCTCAACGTGCTGCCCACCGTCGGCTGGGCCGAGCGCGGTTCCGGAGACGCCA GCGGCCACGGCAATTCCGTGCCCCGCTTCCACCTGACCTGGGGCACCGGCCCCGAGGTCGTACGCGTCTTCCGCGAACCC ATCGAGGCTGCCGAGGCGGAAGGCAAGGTCGAGTTCCGCTTCCGCCACCAGGTCGACGAGCTGATTGTAGAAAATGACGC CGTCGTCGGCGTGCGCGGCAGCGTGCTGGAACCGAGCGATTTGGACCGCGGCGTGGCGTCATCTAGAAAGACGGTAGGGG AGTTCGAGCTGCGCGCGCGTGCCGTCGTAGTGACCTCCGGCGGCATCGGCGGCAACCTCGACCTGGTGCGCCGCGCGTGG CCGACCGACCAGTGGGGCCCGGTGCCGAACGACATGGTCACCGGCGTGCCCGCCCATGTGGACGGCCGCATGATCCAGAT CTCCGAAACCGCCGGCGCGAACCTGGTGAACACCGACCGCATGTGGGCTTACACCGAGGGAATGAAGAACTGGAATTCCA TCTGGCCTGGCCACGGCATCCGCATCATCCCGGGCCCGTCCTCGCTGTGGATTGACGCGACCGGCAAGCGCTTCCCAAGC AACATCATTCCGGGCGGCGACACGATCGCCACCATGAAGCACCTCGGTACCACGGGCCACAGTTACTCCTGGTTCATCCT GAACAAGACTATCGCCGACAAGGAGTTCATCTTCTCCGGCTCCGAGCAGAACCCGGATCTCACGATCAAGAAGGTCAAGA ACCTACTTTCCAAGGTTGGCCCCGGCACCCACCCCGCCGTGAAGGCCTTTATGGACCACGGCGAGGACTGGGTGGTCGCC GACGACCTCGGTTCCCTGGTCGAGGGCATGAACGCTATCGCCGACGACGATGCCCCCGCCCTCGACGTCCACGACCTGCG TCGCATCATCGAGGACCGCGACTCGCAGATCGACAATAACTTCAGCAAGGACGCGCAAATCAACTACATCCGCACTGCCC GCGGGTACCTCGGCGACAAGATTGTCCGCTGTGCCGCGCCGCACCGCCTACTCGACGAGTCGAAGGGGCCGCTTATCGCC GTCAAGCTGCACATCCTGACCCGCAAGACCCTCGGTGGCATCGAGACCGATCTTTCCGGACGGTGCTTGCGCTCTGATGG ATCGGTGCTGCCTGGCCTTTATGCCGCAGGCGAGGTCGCCGGTTTCGGTGGCGGCGGTATGCATGGCAAGAATGCCCTTG AAGGCACCTTCCTCGGAGGCTGCATCCACTCCGGCAAGCGTGTTGGCGAGAACCTGAAGGCGACCATTGCTGAGCTCTAG
Upstream 100 bases:
>100_bases TCCTCGCCCCTAAGTAGTTTTGCGATTTCCCCGCGGGGCTCGCCGGATAGTTTTAGCGTAATAATAAATATTCGCGCATA ACCCCGAGAGGAACTCTTCC
Downstream 100 bases:
>100_bases TCAGTGGCGCACCGCTGCATGGCGTGCCGGTGCTCATTAAGGAAGAAGTTGATGTCCGCGGGGTGCCCACGACCTACGGC ACCAATGCCAACCCCACGCC
Product: putative FAD-binding dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 559; Mature: 558
Protein sequence:
>559_residues MTTPTNPDVIIVGAGLAGLVAAYEAQKSGLKVLILDQENRNNLGGQAFWSLGGLFYVGSPEQKLMGVKDSEELAWRDWEN SAQFDDSQNDYWPRRWGREYVRFAATEKRDYLKALGLNVLPTVGWAERGSGDASGHGNSVPRFHLTWGTGPEVVRVFREP IEAAEAEGKVEFRFRHQVDELIVENDAVVGVRGSVLEPSDLDRGVASSRKTVGEFELRARAVVVTSGGIGGNLDLVRRAW PTDQWGPVPNDMVTGVPAHVDGRMIQISETAGANLVNTDRMWAYTEGMKNWNSIWPGHGIRIIPGPSSLWIDATGKRFPS NIIPGGDTIATMKHLGTTGHSYSWFILNKTIADKEFIFSGSEQNPDLTIKKVKNLLSKVGPGTHPAVKAFMDHGEDWVVA DDLGSLVEGMNAIADDDAPALDVHDLRRIIEDRDSQIDNNFSKDAQINYIRTARGYLGDKIVRCAAPHRLLDESKGPLIA VKLHILTRKTLGGIETDLSGRCLRSDGSVLPGLYAAGEVAGFGGGGMHGKNALEGTFLGGCIHSGKRVGENLKATIAEL
Sequences:
>Translated_559_residues MTTPTNPDVIIVGAGLAGLVAAYEAQKSGLKVLILDQENRNNLGGQAFWSLGGLFYVGSPEQKLMGVKDSEELAWRDWEN SAQFDDSQNDYWPRRWGREYVRFAATEKRDYLKALGLNVLPTVGWAERGSGDASGHGNSVPRFHLTWGTGPEVVRVFREP IEAAEAEGKVEFRFRHQVDELIVENDAVVGVRGSVLEPSDLDRGVASSRKTVGEFELRARAVVVTSGGIGGNLDLVRRAW PTDQWGPVPNDMVTGVPAHVDGRMIQISETAGANLVNTDRMWAYTEGMKNWNSIWPGHGIRIIPGPSSLWIDATGKRFPS NIIPGGDTIATMKHLGTTGHSYSWFILNKTIADKEFIFSGSEQNPDLTIKKVKNLLSKVGPGTHPAVKAFMDHGEDWVVA DDLGSLVEGMNAIADDDAPALDVHDLRRIIEDRDSQIDNNFSKDAQINYIRTARGYLGDKIVRCAAPHRLLDESKGPLIA VKLHILTRKTLGGIETDLSGRCLRSDGSVLPGLYAAGEVAGFGGGGMHGKNALEGTFLGGCIHSGKRVGENLKATIAEL >Mature_558_residues TTPTNPDVIIVGAGLAGLVAAYEAQKSGLKVLILDQENRNNLGGQAFWSLGGLFYVGSPEQKLMGVKDSEELAWRDWENS AQFDDSQNDYWPRRWGREYVRFAATEKRDYLKALGLNVLPTVGWAERGSGDASGHGNSVPRFHLTWGTGPEVVRVFREPI EAAEAEGKVEFRFRHQVDELIVENDAVVGVRGSVLEPSDLDRGVASSRKTVGEFELRARAVVVTSGGIGGNLDLVRRAWP TDQWGPVPNDMVTGVPAHVDGRMIQISETAGANLVNTDRMWAYTEGMKNWNSIWPGHGIRIIPGPSSLWIDATGKRFPSN IIPGGDTIATMKHLGTTGHSYSWFILNKTIADKEFIFSGSEQNPDLTIKKVKNLLSKVGPGTHPAVKAFMDHGEDWVVAD DLGSLVEGMNAIADDDAPALDVHDLRRIIEDRDSQIDNNFSKDAQINYIRTARGYLGDKIVRCAAPHRLLDESKGPLIAV KLHILTRKTLGGIETDLSGRCLRSDGSVLPGLYAAGEVAGFGGGGMHGKNALEGTFLGGCIHSGKRVGENLKATIAEL
Specific function: Able to catalyze the elimination of the C-1 and C-2 hydrogen atoms of the A-ring from the polycyclic ring structure of 3-ketosteroids, but the ketosteroid dehydrogenase activity is low compared to KsdD in the cholesterol degradation process. The low activ
COG id: COG3573
COG function: function code R; Predicted oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAD-dependent oxidoreductase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60765; Mature: 60634
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPTNPDVIIVGAGLAGLVAAYEAQKSGLKVLILDQENRNNLGGQAFWSLGGLFYVGSP CCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCCEEEECCC EQKLMGVKDSEELAWRDWENSAQFDDSQNDYWPRRWGREYVRFAATEKRDYLKALGLNVL HHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC PTVGWAERGSGDASGHGNSVPRFHLTWGTGPEVVRVFREPIEAAEAEGKVEFRFRHQVDE CCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHH LIVENDAVVGVRGSVLEPSDLDRGVASSRKTVGEFELRARAVVVTSGGIGGNLDLVRRAW HHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCEEEEEEEEEEECCCCCCCHHHHHHCC PTDQWGPVPNDMVTGVPAHVDGRMIQISETAGANLVNTDRMWAYTEGMKNWNSIWPGHGI CCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCCCEECCCCEEEEHHHHCCCCCCCCCCCE RIIPGPSSLWIDATGKRFPSNIIPGGDTIATMKHLGTTGHSYSWFILNKTIADKEFIFSG EEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCEEEECC SEQNPDLTIKKVKNLLSKVGPGTHPAVKAFMDHGEDWVVADDLGSLVEGMNAIADDDAPA CCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCC LDVHDLRRIIEDRDSQIDNNFSKDAQINYIRTARGYLGDKIVRCAAPHRLLDESKGPLIA CCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCHHHHHCCCCCEEE VKLHILTRKTLGGIETDLSGRCLRSDGSVLPGLYAAGEVAGFGGGGMHGKNALEGTFLGG EEEEEEHHHHHCCCCCCCCCCEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEHH CIHSGKRVGENLKATIAEL HHHCCHHHCCHHHHHHHCC >Mature Secondary Structure TTPTNPDVIIVGAGLAGLVAAYEAQKSGLKVLILDQENRNNLGGQAFWSLGGLFYVGSP CCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCCEEEECCC EQKLMGVKDSEELAWRDWENSAQFDDSQNDYWPRRWGREYVRFAATEKRDYLKALGLNVL HHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC PTVGWAERGSGDASGHGNSVPRFHLTWGTGPEVVRVFREPIEAAEAEGKVEFRFRHQVDE CCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHH LIVENDAVVGVRGSVLEPSDLDRGVASSRKTVGEFELRARAVVVTSGGIGGNLDLVRRAW HHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCEEEEEEEEEEECCCCCCCHHHHHHCC PTDQWGPVPNDMVTGVPAHVDGRMIQISETAGANLVNTDRMWAYTEGMKNWNSIWPGHGI CCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCCCEECCCCEEEEHHHHCCCCCCCCCCCE RIIPGPSSLWIDATGKRFPSNIIPGGDTIATMKHLGTTGHSYSWFILNKTIADKEFIFSG EEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCEEEECC SEQNPDLTIKKVKNLLSKVGPGTHPAVKAFMDHGEDWVVADDLGSLVEGMNAIADDDAPA CCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCC LDVHDLRRIIEDRDSQIDNNFSKDAQINYIRTARGYLGDKIVRCAAPHRLLDESKGPLIA CCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCHHHHHCCCCCEEE VKLHILTRKTLGGIETDLSGRCLRSDGSVLPGLYAAGEVAGFGGGGMHGKNALEGTFLGG EEEEEEHHHHHCCCCCCCCCCEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEHH CIHSGKRVGENLKATIAEL HHHCCHHHCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA