Definition | Corynebacterium jeikeium K411, complete genome. |
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Accession | NC_007164 |
Length | 2,462,499 |
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The map label for this gene is pyrG
Identifier: 68535948
GI number: 68535948
Start: 1041131
End: 1042798
Strand: Direct
Name: pyrG
Synonym: jk0871
Alternate gene names: 68535948
Gene position: 1041131-1042798 (Clockwise)
Preceding gene: 68535947
Following gene: 68535949
Centisome position: 42.28
GC content: 62.41
Gene sequence:
>1668_bases TTGGCCACTAATCGTGCAAAGAGCAGCACTAAATACATCTTCGTCACCGGTGGTGTGGCGTCCTCGCTGGGCAAGGGGCT CACGGCAGCAAGCCTAGGGCAGCTGCTTTCCTCCCGTGGCCTGCGGGTAACCATGCAAAAGCTGGATCCGTACCTCAACG TTGATCCGGGCACCATGAACCCCTTCGAGCACGGTGAAGTGTTCGTTACCGAGGACGGTGCGGAGACTGACCTGGATCTA GGCCACTACGAGCGTTTCCTGGACCGCAACCTCTCCGCCGCTGGCAACGTCACCACCGGCAAGGTGTACTCCAATGTCAT CGCCAAGGAGCGCCGCGGTGAGTTCCTGGGCAAGACCGTCCAGGTGATCCCTCACATCACTGACGAGATTAAGTCGGCCG TGTTGGCGATGGGCCAGCCGGATAAGAACGGCCAGGCCCCGGACGTCGTCATTAGCGAGATCGGCGGCACCGTCGGCGAC ATTGAATCCCAGCCCTTCCTAGAGGCCATCCGCCAGGTCCGCCACGAGGCAGGCCGCGAGAACATTGCCTTCATTCACGT TTCTCTGGTGCCTTACCTGGCGCCGTCGGGCGAGTTGAAGACTAAGCCGACCCAGCACTCCGTAGCGGAACTGCGCAGCA TCGGTATCGTCCCGGACGCGATTGTTTTGCGCGCCGACCGTGAGGTCCCGCAGGCTATGAAGTCCAAGATCGCCCTGATG TGCGACGTGGACGAGGATGGCGTGGTTTCCTGCCCGGATGCGCCTTCCATTTACGACATCCCGAAGGTGCTGCACTCCCA GCACTTGGATAATTACATCATCCGCCGCCTGAACCTGCCGTTCCGCGACGTGGACTGGACAACCTGGGGCAACCTGTTGG AGAGCGTCCACAACCCGCAGGGTGAAGTCACCATCGGCATCGTCGGCAAGTACATCGATCTGCCGGATGCTTACCTCTCC GTCGCGGAAGCGATCCGCGCGGGCGGTTTCGGAGCGAACGTGCGCGCCAACGTGAAGTGGGTCGCCTCCGATGAGTGCGA GACCGAAAAGGGCGCTGCCGAGGCTCTGAAGGACGTTGACGGTGTAGTCATCCCCGGTGGTTTTGGCAACCGCGGCATCG AAGGCAAGATTGGCGCCATCACCTACGCGCGTAAGAACAAGCTTCCGCTGCTGGGCATTTGCTTGGGCCTGCAGTGCATC GTTATCGAGGCCGCGCGCACCGCAGGGCTCACCGATGCTTCCTCTACTGAGTTTGACGCCAACGCCTCCACCCCGGTGAT CTCCACCATGGAGGAACAGAAGGCAGCTGTGTCGGGCGAGGCGGACCTGGGCGGAACTATGCGTCTGGGCGCTTACCCAG CGCGCCTGGCTGAAGGCTCCCTGGTCGCTGAGATGTACGGTGCTACCGACGTGTCGGAGCGCCACCGTCACCGCTACGAG GTGAACAACGCGTACCGCGAGCAGATCACCGAGGGCTCCGGCCTGCAGTTCTCCGGCACCTCTCCGGACGGCACCTTGGT TGAGTTCGTGGAGTACCCGAAGGACGTACACCCGTACTTCGTGGCCACCCAGGCCCACCCGGAGTACAAGTCCCGCCCGA CCCGTTCCCACCCGCTGTTCCAGGGACTGGTGGACGCTGCGCTGAAGCACCAGGCTGGGCGCTCCTAA
Upstream 100 bases:
>100_bases CGCCGCCGCGAACGCGTCGAATGCTACGCCTGAGTAGGCTTGTGTTAGGCTGAAACCCCGTAGATAGCGAAGTTCAAGCG TCGTTGATTCGGGAGTTACC
Downstream 100 bases:
>100_bases TTCAGCGCGCCTAGGCTTCCACTCCTAAACTGGGGAGTCATGAGCAACGACAGCACCCCGTACCGCGTTGTAGATAGCGA ACTGCTGCTGGACGCGCCGA
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase
Number of amino acids: Translated: 555; Mature: 554
Protein sequence:
>555_residues MATNRAKSSTKYIFVTGGVASSLGKGLTAASLGQLLSSRGLRVTMQKLDPYLNVDPGTMNPFEHGEVFVTEDGAETDLDL GHYERFLDRNLSAAGNVTTGKVYSNVIAKERRGEFLGKTVQVIPHITDEIKSAVLAMGQPDKNGQAPDVVISEIGGTVGD IESQPFLEAIRQVRHEAGRENIAFIHVSLVPYLAPSGELKTKPTQHSVAELRSIGIVPDAIVLRADREVPQAMKSKIALM CDVDEDGVVSCPDAPSIYDIPKVLHSQHLDNYIIRRLNLPFRDVDWTTWGNLLESVHNPQGEVTIGIVGKYIDLPDAYLS VAEAIRAGGFGANVRANVKWVASDECETEKGAAEALKDVDGVVIPGGFGNRGIEGKIGAITYARKNKLPLLGICLGLQCI VIEAARTAGLTDASSTEFDANASTPVISTMEEQKAAVSGEADLGGTMRLGAYPARLAEGSLVAEMYGATDVSERHRHRYE VNNAYREQITEGSGLQFSGTSPDGTLVEFVEYPKDVHPYFVATQAHPEYKSRPTRSHPLFQGLVDAALKHQAGRS
Sequences:
>Translated_555_residues MATNRAKSSTKYIFVTGGVASSLGKGLTAASLGQLLSSRGLRVTMQKLDPYLNVDPGTMNPFEHGEVFVTEDGAETDLDL GHYERFLDRNLSAAGNVTTGKVYSNVIAKERRGEFLGKTVQVIPHITDEIKSAVLAMGQPDKNGQAPDVVISEIGGTVGD IESQPFLEAIRQVRHEAGRENIAFIHVSLVPYLAPSGELKTKPTQHSVAELRSIGIVPDAIVLRADREVPQAMKSKIALM CDVDEDGVVSCPDAPSIYDIPKVLHSQHLDNYIIRRLNLPFRDVDWTTWGNLLESVHNPQGEVTIGIVGKYIDLPDAYLS VAEAIRAGGFGANVRANVKWVASDECETEKGAAEALKDVDGVVIPGGFGNRGIEGKIGAITYARKNKLPLLGICLGLQCI VIEAARTAGLTDASSTEFDANASTPVISTMEEQKAAVSGEADLGGTMRLGAYPARLAEGSLVAEMYGATDVSERHRHRYE VNNAYREQITEGSGLQFSGTSPDGTLVEFVEYPKDVHPYFVATQAHPEYKSRPTRSHPLFQGLVDAALKHQAGRS >Mature_554_residues ATNRAKSSTKYIFVTGGVASSLGKGLTAASLGQLLSSRGLRVTMQKLDPYLNVDPGTMNPFEHGEVFVTEDGAETDLDLG HYERFLDRNLSAAGNVTTGKVYSNVIAKERRGEFLGKTVQVIPHITDEIKSAVLAMGQPDKNGQAPDVVISEIGGTVGDI ESQPFLEAIRQVRHEAGRENIAFIHVSLVPYLAPSGELKTKPTQHSVAELRSIGIVPDAIVLRADREVPQAMKSKIALMC DVDEDGVVSCPDAPSIYDIPKVLHSQHLDNYIIRRLNLPFRDVDWTTWGNLLESVHNPQGEVTIGIVGKYIDLPDAYLSV AEAIRAGGFGANVRANVKWVASDECETEKGAAEALKDVDGVVIPGGFGNRGIEGKIGAITYARKNKLPLLGICLGLQCIV IEAARTAGLTDASSTEFDANASTPVISTMEEQKAAVSGEADLGGTMRLGAYPARLAEGSLVAEMYGATDVSERHRHRYEV NNAYREQITEGSGLQFSGTSPDGTLVEFVEYPKDVHPYFVATQAHPEYKSRPTRSHPLFQGLVDAALKHQAGRS
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Homo sapiens, GI28559085, Length=554, Percent_Identity=46.028880866426, Blast_Score=473, Evalue=1e-133, Organism=Homo sapiens, GI28559083, Length=554, Percent_Identity=46.028880866426, Blast_Score=473, Evalue=1e-133, Organism=Homo sapiens, GI221316689, Length=554, Percent_Identity=46.028880866426, Blast_Score=473, Evalue=1e-133, Organism=Homo sapiens, GI148491070, Length=555, Percent_Identity=44.6846846846847, Blast_Score=464, Evalue=1e-131, Organism=Escherichia coli, GI1789142, Length=550, Percent_Identity=54.5454545454545, Blast_Score=575, Evalue=1e-165, Organism=Caenorhabditis elegans, GI25148299, Length=610, Percent_Identity=38.1967213114754, Blast_Score=387, Evalue=1e-108, Organism=Saccharomyces cerevisiae, GI6322563, Length=570, Percent_Identity=44.2105263157895, Blast_Score=446, Evalue=1e-126, Organism=Saccharomyces cerevisiae, GI6319432, Length=569, Percent_Identity=43.4094903339192, Blast_Score=434, Evalue=1e-122, Organism=Drosophila melanogaster, GI24664469, Length=555, Percent_Identity=46.6666666666667, Blast_Score=468, Evalue=1e-132, Organism=Drosophila melanogaster, GI21357815, Length=500, Percent_Identity=45, Blast_Score=398, Evalue=1e-111,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): PYRG_CORJK (Q4JVX2)
Other databases:
- EMBL: CR931997 - RefSeq: YP_250653.1 - HSSP: P17812 - ProteinModelPortal: Q4JVX2 - SMR: Q4JVX2 - STRING: Q4JVX2 - GeneID: 3431919 - GenomeReviews: CR931997_GR - KEGG: cjk:jk0871 - NMPDR: fig|306537.3.peg.11 - eggNOG: COG0504 - HOGENOM: HBG597806 - OMA: RVTMQKL - ProtClustDB: PRK05380 - BioCyc: CJEI306537:JK0871-MONOMER - HAMAP: MF_01227 - InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 - TIGRFAMs: TIGR00337
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase
EC number: =6.3.4.2
Molecular weight: Translated: 59818; Mature: 59687
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 394-394 ACT_SITE 526-526 ACT_SITE 528-528
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATNRAKSSTKYIFVTGGVASSLGKGLTAASLGQLLSSRGLRVTMQKLDPYLNVDPGTMN CCCCCCCCCCCEEEEECCHHHHHCCCCHHHHHHHHHHCCCCEEEHHHCCCCEECCCCCCC PFEHGEVFVTEDGAETDLDLGHYERFLDRNLSAAGNVTTGKVYSNVIAKERRGEFLGKTV CCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QVIPHITDEIKSAVLAMGQPDKNGQAPDVVISEIGGTVGDIESQPFLEAIRQVRHEAGRE HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC NIAFIHVSLVPYLAPSGELKTKPTQHSVAELRSIGIVPDAIVLRADREVPQAMKSKIALM CEEEEEEEEEHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCEEEE CDVDEDGVVSCPDAPSIYDIPKVLHSQHLDNYIIRRLNLPFRDVDWTTWGNLLESVHNPQ EECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC GEVTIGIVGKYIDLPDAYLSVAEAIRAGGFGANVRANVKWVASDECETEKGAAEALKDVD CCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCC GVVIPGGFGNRGIEGKIGAITYARKNKLPLLGICLGLQCIVIEAARTAGLTDASSTEFDA CEEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHCCHHEEEEHHHHCCCCCCCCCCCCC NASTPVISTMEEQKAAVSGEADLGGTMRLGAYPARLAEGSLVAEMYGATDVSERHRHRYE CCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHCCCCHHHHHHCCCCHHHHHHHHHH VNNAYREQITEGSGLQFSGTSPDGTLVEFVEYPKDVHPYFVATQAHPEYKSRPTRSHPLF HHHHHHHHHCCCCCEEECCCCCCCHHHHHHHCCCCCCCEEEEECCCCCHHCCCCCCCHHH QGLVDAALKHQAGRS HHHHHHHHHHHCCCC >Mature Secondary Structure ATNRAKSSTKYIFVTGGVASSLGKGLTAASLGQLLSSRGLRVTMQKLDPYLNVDPGTMN CCCCCCCCCCEEEEECCHHHHHCCCCHHHHHHHHHHCCCCEEEHHHCCCCEECCCCCCC PFEHGEVFVTEDGAETDLDLGHYERFLDRNLSAAGNVTTGKVYSNVIAKERRGEFLGKTV CCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QVIPHITDEIKSAVLAMGQPDKNGQAPDVVISEIGGTVGDIESQPFLEAIRQVRHEAGRE HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC NIAFIHVSLVPYLAPSGELKTKPTQHSVAELRSIGIVPDAIVLRADREVPQAMKSKIALM CEEEEEEEEEHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCEEEE CDVDEDGVVSCPDAPSIYDIPKVLHSQHLDNYIIRRLNLPFRDVDWTTWGNLLESVHNPQ EECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC GEVTIGIVGKYIDLPDAYLSVAEAIRAGGFGANVRANVKWVASDECETEKGAAEALKDVD CCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCC GVVIPGGFGNRGIEGKIGAITYARKNKLPLLGICLGLQCIVIEAARTAGLTDASSTEFDA CEEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHCCHHEEEEHHHHCCCCCCCCCCCCC NASTPVISTMEEQKAAVSGEADLGGTMRLGAYPARLAEGSLVAEMYGATDVSERHRHRYE CCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHCCCCHHHHHHCCCCHHHHHHHHHH VNNAYREQITEGSGLQFSGTSPDGTLVEFVEYPKDVHPYFVATQAHPEYKSRPTRSHPLF HHHHHHHHHCCCCCEEECCCCCCCHHHHHHHCCCCCCCEEEEECCCCCHHCCCCCCCHHH QGLVDAALKHQAGRS HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA