Definition | Corynebacterium jeikeium K411, complete genome. |
---|---|
Accession | NC_007164 |
Length | 2,462,499 |
Click here to switch to the map view.
The map label for this gene is hisB
Identifier: 68535863
GI number: 68535863
Start: 942374
End: 942988
Strand: Direct
Name: hisB
Synonym: jk0788
Alternate gene names: 68535863
Gene position: 942374-942988 (Clockwise)
Preceding gene: 68535862
Following gene: 68535864
Centisome position: 38.27
GC content: 66.83
Gene sequence:
>615_bases GTGGCCACGAACCCCACCCCGCGCATCGGGAAGGCCCAGCGCGCCACCAAAGAATCAGACATTCAGGTCGAGTGGAACCT GGACGGCACCGGAAAGACCGACATCGATACGGGAGTGCCGTTCTTCGACCATATGCTGACCGCCCTCGGCGCGCACGGTT CCTTTGACCTGAAGGTGCACGCCCGCGGCGACGTGGAGATCGACGCGCACCACACCGTCGAGGACACCGCCATCGTCATG GGCCAGGCCCTGGCGCAGGCGTTGGGCGACAAGGCGGGTATCCGCCGCTTCGGCGATGCTTTCATCCCGATGGACGAGAC GCTGGCGCACGCTGCTGTGGACGTGTCTGGCCGCCCGTACTACGTGGGCGTGGGGGAGCCGGAGCAGATGCTCAGCTCGG TGATCGGTGGGCACTACGCCACCGTCATCAATCAGCACTTCTTCGAGACGCTGGCGCTGAACTCGCGCATTGCCCTGCAC GTGCGCTGCCTGTACGGCCGCGACCCGCACCACATCACCGAGGCGGAATTCAAGGCCGTGGCCCGCGCACTGCGCGCCGC CGTGGAGGACGACCCGCGCGTGGGCGGGGTTCCGTCGACCAAGGGAACACTGTAA
Upstream 100 bases:
>100_bases TCTTGCCGCCGCCGCCAAGATGATGGACGATTAGACACACCAGACAGACGTTTCAAGAGCTTTTAGAGAACGAGACCAGA GAGGTAGGTGCAAAGCCACC
Downstream 100 bases:
>100_bases TGGCGCGCCCGAAGGCGCTGACCATTGAAGAACTAGAAAAGATCGATTCCGTGTGGAAGGCCCCCGGCCTGATCGCCACA CTGGTGTCGGTCTTCTGTGC
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MATNPTPRIGKAQRATKESDIQVEWNLDGTGKTDIDTGVPFFDHMLTALGAHGSFDLKVHARGDVEIDAHHTVEDTAIVM GQALAQALGDKAGIRRFGDAFIPMDETLAHAAVDVSGRPYYVGVGEPEQMLSSVIGGHYATVINQHFFETLALNSRIALH VRCLYGRDPHHITEAEFKAVARALRAAVEDDPRVGGVPSTKGTL
Sequences:
>Translated_204_residues MATNPTPRIGKAQRATKESDIQVEWNLDGTGKTDIDTGVPFFDHMLTALGAHGSFDLKVHARGDVEIDAHHTVEDTAIVM GQALAQALGDKAGIRRFGDAFIPMDETLAHAAVDVSGRPYYVGVGEPEQMLSSVIGGHYATVINQHFFETLALNSRIALH VRCLYGRDPHHITEAEFKAVARALRAAVEDDPRVGGVPSTKGTL >Mature_203_residues ATNPTPRIGKAQRATKESDIQVEWNLDGTGKTDIDTGVPFFDHMLTALGAHGSFDLKVHARGDVEIDAHHTVEDTAIVMG QALAQALGDKAGIRRFGDAFIPMDETLAHAAVDVSGRPYYVGVGEPEQMLSSVIGGHYATVINQHFFETLALNSRIALHV RCLYGRDPHHITEAEFKAVARALRAAVEDDPRVGGVPSTKGTL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family
Homologues:
Organism=Escherichia coli, GI87082027, Length=199, Percent_Identity=43.7185929648241, Blast_Score=151, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6324776, Length=171, Percent_Identity=45.0292397660819, Blast_Score=142, Evalue=5e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS7_CORJK (Q4JW57)
Other databases:
- EMBL: CR931997 - RefSeq: YP_250568.1 - HSSP: P34047 - ProteinModelPortal: Q4JW57 - SMR: Q4JW57 - STRING: Q4JW57 - GeneID: 3433177 - GenomeReviews: CR931997_GR - KEGG: cjk:jk0788 - NMPDR: fig|306537.3.peg.1762 - eggNOG: COG0131 - HOGENOM: HBG289010 - OMA: RQAVEYD - ProtClustDB: PRK00951 - BioCyc: CJEI306537:JK0788-MONOMER - GO: GO:0005737 - HAMAP: MF_00076 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568
Pfam domain/function: PF00475 IGPD; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =4.2.1.19
Molecular weight: Translated: 21993; Mature: 21862
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS00954 IGP_DEHYDRATASE_1; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATNPTPRIGKAQRATKESDIQVEWNLDGTGKTDIDTGVPFFDHMLTALGAHGSFDLKVH CCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEE ARGDVEIDAHHTVEDTAIVMGQALAQALGDKAGIRRFGDAFIPMDETLAHAAVDVSGRPY ECCCEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHEEECCCCCE YVGVGEPEQMLSSVIGGHYATVINQHFFETLALNSRIALHVRCLYGRDPHHITEAEFKAV EEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCHHHHHHH ARALRAAVEDDPRVGGVPSTKGTL HHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure ATNPTPRIGKAQRATKESDIQVEWNLDGTGKTDIDTGVPFFDHMLTALGAHGSFDLKVH CCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEE ARGDVEIDAHHTVEDTAIVMGQALAQALGDKAGIRRFGDAFIPMDETLAHAAVDVSGRPY ECCCEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHEEECCCCCE YVGVGEPEQMLSSVIGGHYATVINQHFFETLALNSRIALHVRCLYGRDPHHITEAEFKAV EEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCHHHHHHH ARALRAAVEDDPRVGGVPSTKGTL HHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA