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The map label for this gene is yafL [C]

Identifier: 68535801

GI number: 68535801

Start: 865916

End: 867118

Strand: Direct

Name: yafL [C]

Synonym: jk0726

Alternate gene names: 68535801

Gene position: 865916-867118 (Clockwise)

Preceding gene: 68535800

Following gene: 68535802

Centisome position: 35.16

GC content: 61.01

Gene sequence:

>1203_bases
GTGAACGTGTTGTCTTCCTCTTCCCGTGATCGCCTCGTCGGCAGCCGTACTGCCGCCAAGGCAGCAACCGCAGCACTGCT
AGCCCTCGCAGTGGGGAGCTCGCTCCCACAGGCAGGGGCGGATCCTCAGCAGGATCAGCAGCAGGGCGCCCCCCAGCAAG
GTAACGAGCAAAAGGACGACAAGAAGGCCGAGCAGAAGCGCGATGAGGAGATCCGCCGACTGCTGGATGCGCCGATCCCG
AAGGACGTGGACGGCCTCCTGGCCCACGTGGACAAGATCTCCGGCTTCGCCTCCGAGACTTCTGACGAGGTTGAACAACT
AAAAATCGACATTCAGCAGGCACAGGGAAACCTGGACAAGGCTAATAAATCTGCCGAAGACGCCCAGAAGAAGGCTGACA
AGCTGAATACTGACGTGAGGGCGTCCCGCGAAAACGTCTCCGGCGTATCCCAGGCTATGTACCGTGGTGCGACGGTGGAT
CCGGTTTCCGCATTTGTAGGCTCTCAAGGCCCGCAGGCTGCTGTTGAGAGGTCCTCTTACCTAGCGTCCATTGGTGATAA
GCGTGCCGATACCGTTAACGCCCTGAGCCGTCAGCTCAAGGATGCAGCCAGCGAGAAAAGCAAGGCCAGCCGGTCCAAGG
CTACTGCTAACTTCCAACTGCGAACCCTGAACGACCGCAAGAAGGATCTGGACGACCGCAACAAGCAGCTAGATGCGCTG
AAGGATAAGGTCATGAAGGCCGTTGATGGCCTGAGTCCGGAGGATCGTCGTCGTTGGGTTGACCGCAATGGTCCGATCGA
TGTGGACGTGGAACAGTTCCTCGGCGACCTGAAGAAGAAGGTCGGCTCCGACGGTCCAGTGAATGCTACCGGCGTGGTCG
CCGCCGCCCTGTCTAAGCTGGGCGCGCCGTACTCCTGGGGTGCCACCGGCCCCGACGCGTTCGACTGCTCCGGCCTGATG
TTCTGGGCATACCAGCAGGAAGGCAAGTCCATTCCGCGTACTTCCTCCGCCCAGATCGCCGGCGGCCAGTCGGTTTCCAT
CAACGACCTGCAGCCGGGTGACATCGTCGGTTACTACCCGGGCGTGACGCACGTCGGCATGTACATCGGCGATGGCAAGA
TCGTCCACGCCTCCGACTACGGCATTCCGGTCCAGGTGGTCCCGGTGGACTCTATGCCGATCCAGGGTGCGGCACGCTAC
TAA

Upstream 100 bases:

>100_bases
CCCTTTCTTGTGGCAGAATATCTATCGTTATCAAACGTTGATAGACGTTTCCTGGCCGTTCGACGGCCCCTATTGAGTGA
GAATTAAAGAAAGTCCAGTC

Downstream 100 bases:

>100_bases
GGCGCGTGCGGTAGCATCCTTGCCTATGGCCAAGGAAGATCAGCCCAAAGAGGACCAGCCCCAAGGAGGCCGGGGGAGTC
ACCCGCGCGTCCTCGTCGTC

Product: putative secreted protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MNVLSSSSRDRLVGSRTAAKAATAALLALAVGSSLPQAGADPQQDQQQGAPQQGNEQKDDKKAEQKRDEEIRRLLDAPIP
KDVDGLLAHVDKISGFASETSDEVEQLKIDIQQAQGNLDKANKSAEDAQKKADKLNTDVRASRENVSGVSQAMYRGATVD
PVSAFVGSQGPQAAVERSSYLASIGDKRADTVNALSRQLKDAASEKSKASRSKATANFQLRTLNDRKKDLDDRNKQLDAL
KDKVMKAVDGLSPEDRRRWVDRNGPIDVDVEQFLGDLKKKVGSDGPVNATGVVAAALSKLGAPYSWGATGPDAFDCSGLM
FWAYQQEGKSIPRTSSAQIAGGQSVSINDLQPGDIVGYYPGVTHVGMYIGDGKIVHASDYGIPVQVVPVDSMPIQGAARY

Sequences:

>Translated_400_residues
MNVLSSSSRDRLVGSRTAAKAATAALLALAVGSSLPQAGADPQQDQQQGAPQQGNEQKDDKKAEQKRDEEIRRLLDAPIP
KDVDGLLAHVDKISGFASETSDEVEQLKIDIQQAQGNLDKANKSAEDAQKKADKLNTDVRASRENVSGVSQAMYRGATVD
PVSAFVGSQGPQAAVERSSYLASIGDKRADTVNALSRQLKDAASEKSKASRSKATANFQLRTLNDRKKDLDDRNKQLDAL
KDKVMKAVDGLSPEDRRRWVDRNGPIDVDVEQFLGDLKKKVGSDGPVNATGVVAAALSKLGAPYSWGATGPDAFDCSGLM
FWAYQQEGKSIPRTSSAQIAGGQSVSINDLQPGDIVGYYPGVTHVGMYIGDGKIVHASDYGIPVQVVPVDSMPIQGAARY
>Mature_400_residues
MNVLSSSSRDRLVGSRTAAKAATAALLALAVGSSLPQAGADPQQDQQQGAPQQGNEQKDDKKAEQKRDEEIRRLLDAPIP
KDVDGLLAHVDKISGFASETSDEVEQLKIDIQQAQGNLDKANKSAEDAQKKADKLNTDVRASRENVSGVSQAMYRGATVD
PVSAFVGSQGPQAAVERSSYLASIGDKRADTVNALSRQLKDAASEKSKASRSKATANFQLRTLNDRKKDLDDRNKQLDAL
KDKVMKAVDGLSPEDRRRWVDRNGPIDVDVEQFLGDLKKKVGSDGPVNATGVVAAALSKLGAPYSWGATGPDAFDCSGLM
FWAYQQEGKSIPRTSSAQIAGGQSVSINDLQPGDIVGYYPGVTHVGMYIGDGKIVHASDYGIPVQVVPVDSMPIQGAARY

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786421, Length=125, Percent_Identity=35.2, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 42679; Mature: 42679

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVLSSSSRDRLVGSRTAAKAATAALLALAVGSSLPQAGADPQQDQQQGAPQQGNEQKDD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCHHH
KKAEQKRDEEIRRLLDAPIPKDVDGLLAHVDKISGFASETSDEVEQLKIDIQQAQGNLDK
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
ANKSAEDAQKKADKLNTDVRASRENVSGVSQAMYRGATVDPVSAFVGSQGPQAAVERSSY
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHH
LASIGDKRADTVNALSRQLKDAASEKSKASRSKATANFQLRTLNDRKKDLDDRNKQLDAL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHH
KDKVMKAVDGLSPEDRRRWVDRNGPIDVDVEQFLGDLKKKVGSDGPVNATGVVAAALSKL
HHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
GAPYSWGATGPDAFDCSGLMFWAYQQEGKSIPRTSSAQIAGGQSVSINDLQPGDIVGYYP
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCEEEECCCCCCCEEEECC
GVTHVGMYIGDGKIVHASDYGIPVQVVPVDSMPIQGAARY
CHHHHEEEECCCEEEEECCCCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MNVLSSSSRDRLVGSRTAAKAATAALLALAVGSSLPQAGADPQQDQQQGAPQQGNEQKDD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCHHH
KKAEQKRDEEIRRLLDAPIPKDVDGLLAHVDKISGFASETSDEVEQLKIDIQQAQGNLDK
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
ANKSAEDAQKKADKLNTDVRASRENVSGVSQAMYRGATVDPVSAFVGSQGPQAAVERSSY
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHH
LASIGDKRADTVNALSRQLKDAASEKSKASRSKATANFQLRTLNDRKKDLDDRNKQLDAL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHH
KDKVMKAVDGLSPEDRRRWVDRNGPIDVDVEQFLGDLKKKVGSDGPVNATGVVAAALSKL
HHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
GAPYSWGATGPDAFDCSGLMFWAYQQEGKSIPRTSSAQIAGGQSVSINDLQPGDIVGYYP
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCEEEECCCCCCCEEEECC
GVTHVGMYIGDGKIVHASDYGIPVQVVPVDSMPIQGAARY
CHHHHEEEECCCEEEEECCCCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]