| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
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The map label for this gene is spr [C]
Identifier: 68535800
GI number: 68535800
Start: 865084
End: 865692
Strand: Direct
Name: spr [C]
Synonym: jk0725
Alternate gene names: 68535800
Gene position: 865084-865692 (Clockwise)
Preceding gene: 68535797
Following gene: 68535801
Centisome position: 35.13
GC content: 61.74
Gene sequence:
>609_bases ATGGGCAAGCACAGCCTGAAGAAGAACAACGCACCCCGCAACGCAGCAATGATTGCAGCTGTCGGTGTGGGCGCCGCTGT ACTGAACCCCGCTGCAGCCCAGGCTGCTCCGGTTACCCACACCCCGTCTGGCGTCACCGTTGACGTTCCGGACCACCTGC TGCCGACCATCAAGCCCTACTTCAAGCAGGCCAACCTGACCGCTGGTGGCAAGGCTGCTGCTGTGGCTCCTGCTGCTAAG GCGGCTCCGAAGCCGGTTGCTTCCTCTGCCGGCCAGCGCATTGCAGACATTGCCAAGTCCAAGGTTGGCGCTCCGTACTC CTGGGGCGCTTCCGGCCCGAACGCTTTCGACTGCTCCGGCCTGACCTCTTGGGCTCACCGTCAGGTTGGTAAGAACATCC CGCGCACCTCCTCCGCGCAGGCTTCCGCGGGCAAGAAGGTTTCCCTGAATGCTCTGCAGCCGGGCGATGTCATCTCCTAC TACGGTGGCGCTTCCCACGTTGCTATCTACATCGGCAATGGCAAGATCGTTCACGCACTGAACTCCTCCAACCCGGTGCG TATCGACAACCTGCACATGATGCCGGTGTACAACGCGGTGCGTTTCTAA
Upstream 100 bases:
>100_bases AGTTCACCGCACCGCGGTAGCACACAGGAGCTGCCGGGCGAGGGGAGAAGGAAAAGTTCCGAACCCCAAACAACGGATTG AAAGGTAATTGAGGACTTAT
Downstream 100 bases:
>100_bases ATTTTTTAGTGACGCCCATCCGGCGTTTCGCCAGCTCGAAAGATGAAATCGGGGCTGGTGTTAAAGCTGGTGAGCATGTG ATTAAGTGGGGCTGGATCCC
Product: putative secreted protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MGKHSLKKNNAPRNAAMIAAVGVGAAVLNPAAAQAAPVTHTPSGVTVDVPDHLLPTIKPYFKQANLTAGGKAAAVAPAAK AAPKPVASSAGQRIADIAKSKVGAPYSWGASGPNAFDCSGLTSWAHRQVGKNIPRTSSAQASAGKKVSLNALQPGDVISY YGGASHVAIYIGNGKIVHALNSSNPVRIDNLHMMPVYNAVRF
Sequences:
>Translated_202_residues MGKHSLKKNNAPRNAAMIAAVGVGAAVLNPAAAQAAPVTHTPSGVTVDVPDHLLPTIKPYFKQANLTAGGKAAAVAPAAK AAPKPVASSAGQRIADIAKSKVGAPYSWGASGPNAFDCSGLTSWAHRQVGKNIPRTSSAQASAGKKVSLNALQPGDVISY YGGASHVAIYIGNGKIVHALNSSNPVRIDNLHMMPVYNAVRF >Mature_201_residues GKHSLKKNNAPRNAAMIAAVGVGAAVLNPAAAQAAPVTHTPSGVTVDVPDHLLPTIKPYFKQANLTAGGKAAAVAPAAKA APKPVASSAGQRIADIAKSKVGAPYSWGASGPNAFDCSGLTSWAHRQVGKNIPRTSSAQASAGKKVSLNALQPGDVISYY GGASHVAIYIGNGKIVHALNSSNPVRIDNLHMMPVYNAVRF
Specific function: Unknown
COG id: COG0791
COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nlpC/p60 family [H]
Homologues:
Organism=Escherichia coli, GI1788501, Length=94, Percent_Identity=39.3617021276596, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1787944, Length=99, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000064 [H]
Pfam domain/function: PF00877 NLPC_P60 [H]
EC number: NA
Molecular weight: Translated: 20591; Mature: 20459
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKHSLKKNNAPRNAAMIAAVGVGAAVLNPAAAQAAPVTHTPSGVTVDVPDHLLPTIKPY CCCCCCCCCCCCCCCEEEEEHHCCHHHHCCCHHCCCCCEECCCCCEECCCHHHHHHHHHH FKQANLTAGGKAAAVAPAAKAAPKPVASSAGQRIADIAKSKVGAPYSWGASGPNAFDCSG HHHCCCCCCCCCEEECCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC LTSWAHRQVGKNIPRTSSAQASAGKKVSLNALQPGDVISYYGGASHVAIYIGNGKIVHAL HHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCEEEEEECCCEEEEEE NSSNPVRIDNLHMMPVYNAVRF CCCCCEEECCEEECCHHHHHCC >Mature Secondary Structure GKHSLKKNNAPRNAAMIAAVGVGAAVLNPAAAQAAPVTHTPSGVTVDVPDHLLPTIKPY CCCCCCCCCCCCCCEEEEEHHCCHHHHCCCHHCCCCCEECCCCCEECCCHHHHHHHHHH FKQANLTAGGKAAAVAPAAKAAPKPVASSAGQRIADIAKSKVGAPYSWGASGPNAFDCSG HHHCCCCCCCCCEEECCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC LTSWAHRQVGKNIPRTSSAQASAGKKVSLNALQPGDVISYYGGASHVAIYIGNGKIVHAL HHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCEEEEEECCCEEEEEE NSSNPVRIDNLHMMPVYNAVRF CCCCCEEECCEEECCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA