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The map label for this gene is qcrB [H]

Identifier: 68535797

GI number: 68535797

Start: 862203

End: 863837

Strand: Direct

Name: qcrB [H]

Synonym: jk0722

Alternate gene names: 68535797

Gene position: 862203-863837 (Clockwise)

Preceding gene: 68535796

Following gene: 68535800

Centisome position: 35.01

GC content: 59.27

Gene sequence:

>1635_bases
ATGACCACTAAACAACAGAGCCGCGCTGCTAAAGCGGCCAATAACATCGACGAGCGGTACACTGCCTCCGGCCTAATCCG
CCCGCAAATTAACAAGGTATTCCCGACTCACTGGTCGTTCATGCTCGGTGAGATCGCGCTGTACTCCTTCATCATTCTGA
TCCTGTCCGGTGTTTACCTGACGCTGTTCTTCGATCCTTCTATGTCGAAGGTGATCTACGACGGCGCCTACGCACCGCTC
AATGGCGTGGAAATGTCCGCTGCCTACCACACCGCCCTGGACCTTTCGTTCGAGGTTCGCGGTGGCCTGTTTATCCGTCA
GGTTCACCACTGGGCTGCACTGCTGTTCGCGGTGTCCATCATGGTTCACATGATGCGCATCTTCTTCACCGGTGCATTCC
GCAAGCCGCGTGAGGCTAACTGGGTCATCGGCTGCGTCCTGCTGCTGCTGTCTGTAGCAGAGGGCTTCATGGGTTACTCT
CTGCCGGACGACCTGCTTTCCGGTGTTGGTCTGCGCATTATGTCCGCCATCATGGTTGGCCTGCCGGTCATCGGCACCTG
GCTGCACTGGATCATGTTCGCTGGCGACTTCCCAGGTGAGATCATCATTCCGCGCCTGTACATCGCCCACGTTCTGCTGA
TCCCGGGCATTCTGTTGGCCCTGATTGCTGCCCACCTAGCACTGGTCTGGTACCAGAAGCACACCCAGTTCCCTGGACCG
GGTCGTACCGAGAACAACGTTGTCGGTGTTCGTATTCTGCCGGTTTTCGGCCTGAAGGCTGCTTCCTTCGGTCTGATCAC
GTTTGGTGTTGTCGCGCTGATGGCTGGTCTCTTCCAGATCAACGCCATCTGGAACCTGGGCCCGTACAACCCGTCGCAGG
TCTCCGCCGGTTCCCAGCCAGATATCTACATGCTGTGGACTGACGGCGCTGCACGTGTCATGCCTGCATGGGAGCTCTAC
CTCGGCAACTACACCATCCCAGCCGTGTTCTGGGTTGCTCTGCTGCTGGGCGTGCTGGTGGTACTGCTGTTCGCTTACCC
GTGGATCGAGCAGAAGATGACTGGCGATGACGCCCACCACAACCTGCTGCAGCGTCCACGCGACGTGCCGGTTCGTACCG
CACTGGGTGTCATGGCACTGGTCTTCTACGTGCTGCTGACCATCTCCGGTGGTAACGACCTGGTTGCACTGCACTTCACT
ATCTCGCTGAACCTAATGACCTGGGTGGGCCGTATCGGCCTGGTGCTGCTGCCGCCGATCGCGTACTTCATCACCTACCA
CCTGTGCATCTCCCTGCAGCGCAACGACCGCGAGGTTCTGGAGCACGGTATCGAGACTGGCACCATTCGCCAGCTGCCTT
CCGGTGGCTTCATTGAGGTTCACCAGCCGCTGGGCCCGGTTGACGAGCACGGCCACCCGATTCCGCTGGAGTACCAGGGT
GCTTACGTTCCGAAGACCATGAACGAGCTCGGGGCTGCTGGCCTGCCTGGTCGCGGTGGCTTCTTCTCCCCGGATTCCCC
GGAGATTGCAGAGAAGGCCGAGCGTATCGAGGAGGCCAACCACGCGGAGCAGAAGGAAATGTTCGAGCGACTCAACGAGG
AGAACCGTCGTCGCTACGAGGAGCTAGACAAGTAG

Upstream 100 bases:

>100_bases
CCCTGCCTGAGCTGTCGATCTCGGTCGACGAAGAGGGATACATGTACGCCGACCGTAACTTCATCGAGCCTGTCGGCCCG
GCATTCTGGGAGCGTCGTTC

Downstream 100 bases:

>100_bases
TCTCCATTCGAGCTAACTCAACTGCTCTCACATAAGGCTCGAGAAGATCCCGTCCACCAACTGGTGGGCGGGATTTTTGC
TGTATTAGGCTAGGCGGTCG

Product: ubiquinol-cytochrome c reductase cytochrome b subunit

Products: NA

Alternate protein names: Cytochrome bc1 complex cytochrome b subunit [H]

Number of amino acids: Translated: 544; Mature: 543

Protein sequence:

>544_residues
MTTKQQSRAAKAANNIDERYTASGLIRPQINKVFPTHWSFMLGEIALYSFIILILSGVYLTLFFDPSMSKVIYDGAYAPL
NGVEMSAAYHTALDLSFEVRGGLFIRQVHHWAALLFAVSIMVHMMRIFFTGAFRKPREANWVIGCVLLLLSVAEGFMGYS
LPDDLLSGVGLRIMSAIMVGLPVIGTWLHWIMFAGDFPGEIIIPRLYIAHVLLIPGILLALIAAHLALVWYQKHTQFPGP
GRTENNVVGVRILPVFGLKAASFGLITFGVVALMAGLFQINAIWNLGPYNPSQVSAGSQPDIYMLWTDGAARVMPAWELY
LGNYTIPAVFWVALLLGVLVVLLFAYPWIEQKMTGDDAHHNLLQRPRDVPVRTALGVMALVFYVLLTISGGNDLVALHFT
ISLNLMTWVGRIGLVLLPPIAYFITYHLCISLQRNDREVLEHGIETGTIRQLPSGGFIEVHQPLGPVDEHGHPIPLEYQG
AYVPKTMNELGAAGLPGRGGFFSPDSPEIAEKAERIEEANHAEQKEMFERLNEENRRRYEELDK

Sequences:

>Translated_544_residues
MTTKQQSRAAKAANNIDERYTASGLIRPQINKVFPTHWSFMLGEIALYSFIILILSGVYLTLFFDPSMSKVIYDGAYAPL
NGVEMSAAYHTALDLSFEVRGGLFIRQVHHWAALLFAVSIMVHMMRIFFTGAFRKPREANWVIGCVLLLLSVAEGFMGYS
LPDDLLSGVGLRIMSAIMVGLPVIGTWLHWIMFAGDFPGEIIIPRLYIAHVLLIPGILLALIAAHLALVWYQKHTQFPGP
GRTENNVVGVRILPVFGLKAASFGLITFGVVALMAGLFQINAIWNLGPYNPSQVSAGSQPDIYMLWTDGAARVMPAWELY
LGNYTIPAVFWVALLLGVLVVLLFAYPWIEQKMTGDDAHHNLLQRPRDVPVRTALGVMALVFYVLLTISGGNDLVALHFT
ISLNLMTWVGRIGLVLLPPIAYFITYHLCISLQRNDREVLEHGIETGTIRQLPSGGFIEVHQPLGPVDEHGHPIPLEYQG
AYVPKTMNELGAAGLPGRGGFFSPDSPEIAEKAERIEEANHAEQKEMFERLNEENRRRYEELDK
>Mature_543_residues
TTKQQSRAAKAANNIDERYTASGLIRPQINKVFPTHWSFMLGEIALYSFIILILSGVYLTLFFDPSMSKVIYDGAYAPLN
GVEMSAAYHTALDLSFEVRGGLFIRQVHHWAALLFAVSIMVHMMRIFFTGAFRKPREANWVIGCVLLLLSVAEGFMGYSL
PDDLLSGVGLRIMSAIMVGLPVIGTWLHWIMFAGDFPGEIIIPRLYIAHVLLIPGILLALIAAHLALVWYQKHTQFPGPG
RTENNVVGVRILPVFGLKAASFGLITFGVVALMAGLFQINAIWNLGPYNPSQVSAGSQPDIYMLWTDGAARVMPAWELYL
GNYTIPAVFWVALLLGVLVVLLFAYPWIEQKMTGDDAHHNLLQRPRDVPVRTALGVMALVFYVLLTISGGNDLVALHFTI
SLNLMTWVGRIGLVLLPPIAYFITYHLCISLQRNDREVLEHGIETGTIRQLPSGGFIEVHQPLGPVDEHGHPIPLEYQGA
YVPKTMNELGAAGLPGRGGFFSPDSPEIAEKAERIEEANHAEQKEMFERLNEENRRRYEELDK

Specific function: Component of the menaquinol-cytochrome c reductase complex [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60521; Mature: 60389

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS51002 CYTB_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKQQSRAAKAANNIDERYTASGLIRPQINKVFPTHWSFMLGEIALYSFIILILSGVYL
CCCCHHHHHHHHHHCHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHE
TLFFDPSMSKVIYDGAYAPLNGVEMSAAYHTALDLSFEVRGGLFIRQVHHWAALLFAVSI
EEEECCCCHHHEECCCCCCCCCCCHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHH
MVHMMRIFFTGAFRKPREANWVIGCVLLLLSVAEGFMGYSLPDDLLSGVGLRIMSAIMVG
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LPVIGTWLHWIMFAGDFPGEIIIPRLYIAHVLLIPGILLALIAAHLALVWYQKHTQFPGP
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GRTENNVVGVRILPVFGLKAASFGLITFGVVALMAGLFQINAIWNLGPYNPSQVSAGSQP
CCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCC
DIYMLWTDGAARVMPAWELYLGNYTIPAVFWVALLLGVLVVLLFAYPWIEQKMTGDDAHH
CEEEEECCCCCHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
NLLQRPRDVPVRTALGVMALVFYVLLTISGGNDLVALHFTISLNLMTWVGRIGLVLLPPI
HHHCCCCCCCHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHH
AYFITYHLCISLQRNDREVLEHGIETGTIRQLPSGGFIEVHQPLGPVDEHGHPIPLEYQG
HHHHHHHHHHEECCCCHHHHHCCCCCCCHHCCCCCCEEEECCCCCCCCCCCCCCCEEECC
AYVPKTMNELGAAGLPGRGGFFSPDSPEIAEKAERIEEANHAEQKEMFERLNEENRRRYE
CCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHH
ELDK
HHCC
>Mature Secondary Structure 
TTKQQSRAAKAANNIDERYTASGLIRPQINKVFPTHWSFMLGEIALYSFIILILSGVYL
CCCHHHHHHHHHHCHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHE
TLFFDPSMSKVIYDGAYAPLNGVEMSAAYHTALDLSFEVRGGLFIRQVHHWAALLFAVSI
EEEECCCCHHHEECCCCCCCCCCCHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHH
MVHMMRIFFTGAFRKPREANWVIGCVLLLLSVAEGFMGYSLPDDLLSGVGLRIMSAIMVG
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LPVIGTWLHWIMFAGDFPGEIIIPRLYIAHVLLIPGILLALIAAHLALVWYQKHTQFPGP
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GRTENNVVGVRILPVFGLKAASFGLITFGVVALMAGLFQINAIWNLGPYNPSQVSAGSQP
CCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCC
DIYMLWTDGAARVMPAWELYLGNYTIPAVFWVALLLGVLVVLLFAYPWIEQKMTGDDAHH
CEEEEECCCCCHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
NLLQRPRDVPVRTALGVMALVFYVLLTISGGNDLVALHFTISLNLMTWVGRIGLVLLPPI
HHHCCCCCCCHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHH
AYFITYHLCISLQRNDREVLEHGIETGTIRQLPSGGFIEVHQPLGPVDEHGHPIPLEYQG
HHHHHHHHHHEECCCCHHHHHCCCCCCCHHCCCCCCEEEECCCCCCCCCCCCCCCEEECC
AYVPKTMNELGAAGLPGRGGFFSPDSPEIAEKAERIEEANHAEQKEMFERLNEENRRRYE
CCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHH
ELDK
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11382224; 12948626 [H]