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The map label for this gene is dnaQ [H]

Identifier: 68535768

GI number: 68535768

Start: 830685

End: 831353

Strand: Direct

Name: dnaQ [H]

Synonym: jk0693

Alternate gene names: 68535768

Gene position: 830685-831353 (Clockwise)

Preceding gene: 68535767

Following gene: 68535770

Centisome position: 33.73

GC content: 55.9

Gene sequence:

>669_bases
ATGGGCTTTTTAGATAACCTCCTCAACCGCTACACCCCGCGCACACCAGGCGAGCCAGTCTTTGCCGTCATTGACACCGA
AACCACCGGCTTTAACAAGCGCTACGACCGCATCATTGAAATTGCTGCCGTACGCGCCGACGCACATTTCAACCCCGTCG
ATTCCTGGCACACATTGCTGAATCCTGACGGCAAGGCCATTAAAAACTCCCATATTCACGGCATTACCAACGACATGGTG
GCTACTGCTCCAACGTTTAGTGAGGTGTATGGGGACTTCACTAGCTACATCGACGGCATGCATCTATTTGCCCACAACGC
CCCCTTCGACTCAAAAATGATCGTTGCTGAGGTCGACCGCATGACCGGTGTCGACGATGGCAACGAGGACGAGTTCTTCC
CCTTCATCGACACCATTGACCTTGCCAAGCAAATGCTCGACCGTGGCCCCTACAACCTGCCCGCACTCCTAGACCGCCTG
GGATTGGATAATCCGGACGCGCACGCAGCAGTAGCCGATGCGACCGCCACAGTAAACATGCTCCACGCCCTCTTCGGGGC
TCAGCGCGGCGAAATTGGCCGCAAGATTTTGCGTCAAGGTCAAGCATTCCGCGCCACCAACACCTGGCGTACAAGCCACT
CCACCTCACTTCTCCCCCGCGAAATATAG

Upstream 100 bases:

>100_bases
CCACACGGTGCTGGTGTAGTTGTCCACAGAAAACCGTACTGTCGCTATGTTCGATAGCGTCTAGGTCGGCATGTCGGTAG
AGGCCTCTAGGCTCTAGGCC

Downstream 100 bases:

>100_bases
ACACCCACCAGCACAAACGCTAACCACAGCAGTCCGTGCGGGTGGACATATGCTTTAGCATATGGCGGAACATACGCTAT
AACATATGCCTAAACATATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MGFLDNLLNRYTPRTPGEPVFAVIDTETTGFNKRYDRIIEIAAVRADAHFNPVDSWHTLLNPDGKAIKNSHIHGITNDMV
ATAPTFSEVYGDFTSYIDGMHLFAHNAPFDSKMIVAEVDRMTGVDDGNEDEFFPFIDTIDLAKQMLDRGPYNLPALLDRL
GLDNPDAHAAVADATATVNMLHALFGAQRGEIGRKILRQGQAFRATNTWRTSHSTSLLPREI

Sequences:

>Translated_222_residues
MGFLDNLLNRYTPRTPGEPVFAVIDTETTGFNKRYDRIIEIAAVRADAHFNPVDSWHTLLNPDGKAIKNSHIHGITNDMV
ATAPTFSEVYGDFTSYIDGMHLFAHNAPFDSKMIVAEVDRMTGVDDGNEDEFFPFIDTIDLAKQMLDRGPYNLPALLDRL
GLDNPDAHAAVADATATVNMLHALFGAQRGEIGRKILRQGQAFRATNTWRTSHSTSLLPREI
>Mature_221_residues
GFLDNLLNRYTPRTPGEPVFAVIDTETTGFNKRYDRIIEIAAVRADAHFNPVDSWHTLLNPDGKAIKNSHIHGITNDMVA
TAPTFSEVYGDFTSYIDGMHLFAHNAPFDSKMIVAEVDRMTGVDDGNEDEFFPFIDTIDLAKQMLDRGPYNLPALLDRLG
LDNPDAHAAVADATATVNMLHALFGAQRGEIGRKILRQGQAFRATNTWRTSHSTSLLPREI

Specific function: DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease [H]

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786409, Length=174, Percent_Identity=32.183908045977, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006054
- InterPro:   IPR006309
- InterPro:   IPR006055
- InterPro:   IPR013520
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00929 Exonuc_X-T [H]

EC number: =2.7.7.7 [H]

Molecular weight: Translated: 24687; Mature: 24556

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFLDNLLNRYTPRTPGEPVFAVIDTETTGFNKRYDRIIEIAAVRADAHFNPVDSWHTLL
CCHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHC
NPDGKAIKNSHIHGITNDMVATAPTFSEVYGDFTSYIDGMHLFAHNAPFDSKMIVAEVDR
CCCCCHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
MTGVDDGNEDEFFPFIDTIDLAKQMLDRGPYNLPALLDRLGLDNPDAHAAVADATATVNM
HCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LHALFGAQRGEIGRKILRQGQAFRATNTWRTSHSTSLLPREI
HHHHHCCCCCHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GFLDNLLNRYTPRTPGEPVFAVIDTETTGFNKRYDRIIEIAAVRADAHFNPVDSWHTLL
CHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHC
NPDGKAIKNSHIHGITNDMVATAPTFSEVYGDFTSYIDGMHLFAHNAPFDSKMIVAEVDR
CCCCCHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
MTGVDDGNEDEFFPFIDTIDLAKQMLDRGPYNLPALLDRLGLDNPDAHAAVADATATVNM
HCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LHALFGAQRGEIGRKILRQGQAFRATNTWRTSHSTSLLPREI
HHHHHCCCCCHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]