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The map label for this gene is tnp3524a3 [C]

Identifier: 68535767

GI number: 68535767

Start: 829921

End: 830517

Strand: Direct

Name: tnp3524a3 [C]

Synonym: jk0692

Alternate gene names: 68535767

Gene position: 829921-830517 (Clockwise)

Preceding gene: 68535766

Following gene: 68535768

Centisome position: 33.7

GC content: 57.45

Gene sequence:

>597_bases
ATGACAACGCTTCGGGCCAACGTGCCGGATGGCCGCCCTGACCTGGTCAACCGTGACTTCACTGCCCCCGCACCGCACCG
GTTGTGGGTCGCTGACATTACCTATGTGCGCACCTTGACTGGTTTTGCCTACACCGCGTTTATCACCGATGTGTACTCCA
GGAAGATCGTCGGTATGGCGACTCGGGCGAGCATGCGTACCGATGAACTTCCGCTGGAGGCCTTTGAGCACGCCCTGTAT
CACGCTGGTGATCTTCGCTCAGAAGGGCTTGTCCACCACAGTGACCGCGGCTTGCAATATGTGTCGATCCGTTACGGTGA
AGCGCTCGCCTTGGCGGGTGTCGATCCATCTGTCGGCACCGTTGGCGACTCCTATGACAACGCGTTGGCTGAAACGGTCA
ACGGGCTTTACAAAACAGAGCTGATTTATCCCCACCGGCCGTGGACATCGGTCGGTGAAGTCGAGATCGCCACCCTTCGC
TGGGTGCACTGGTGGAACAACCAGCGACTTCATCAATCCCTGGGATATTTCACTCCACAGGAGATGGAGCACGCCTACGA
TCAACGATCAGGCGCTCAAACGTTGGGCGTTAATTAA

Upstream 100 bases:

>100_bases
AGGCTATGCAGCGCGCCGGCTGGAACATCGGTCGTGATCAGACCGCGCGTTTGATGAAGCAAGCCTTGGCGTTCAAGGCC
GCAGGCGTGGCCGCACACCG

Downstream 100 bases:

>100_bases
GCGGAACGAAAACCAGGACGCTTCACGCCTGCCACGAAAGACCAACCACACCCACCCTGTGTATAACCCACACGGTGCTG
GTGTAGTTGTCCACAGAAAA

Product: transposase for IS3524

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MTTLRANVPDGRPDLVNRDFTAPAPHRLWVADITYVRTLTGFAYTAFITDVYSRKIVGMATRASMRTDELPLEAFEHALY
HAGDLRSEGLVHHSDRGLQYVSIRYGEALALAGVDPSVGTVGDSYDNALAETVNGLYKTELIYPHRPWTSVGEVEIATLR
WVHWWNNQRLHQSLGYFTPQEMEHAYDQRSGAQTLGVN

Sequences:

>Translated_198_residues
MTTLRANVPDGRPDLVNRDFTAPAPHRLWVADITYVRTLTGFAYTAFITDVYSRKIVGMATRASMRTDELPLEAFEHALY
HAGDLRSEGLVHHSDRGLQYVSIRYGEALALAGVDPSVGTVGDSYDNALAETVNGLYKTELIYPHRPWTSVGEVEIATLR
WVHWWNNQRLHQSLGYFTPQEMEHAYDQRSGAQTLGVN
>Mature_197_residues
TTLRANVPDGRPDLVNRDFTAPAPHRLWVADITYVRTLTGFAYTAFITDVYSRKIVGMATRASMRTDELPLEAFEHALYH
AGDLRSEGLVHHSDRGLQYVSIRYGEALALAGVDPSVGTVGDSYDNALAETVNGLYKTELIYPHRPWTSVGEVEIATLRW
VHWWNNQRLHQSLGYFTPQEMEHAYDQRSGAQTLGVN

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=145, Percent_Identity=53.7931034482759, Blast_Score=144, Evalue=3e-35,
Organism=Escherichia coli, GI1788405, Length=172, Percent_Identity=30.2325581395349, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787263, Length=172, Percent_Identity=30.2325581395349, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1786753, Length=172, Percent_Identity=30.2325581395349, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1786570, Length=172, Percent_Identity=30.2325581395349, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1786490, Length=172, Percent_Identity=30.2325581395349, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1789981, Length=182, Percent_Identity=28.021978021978, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 22292; Mature: 22161

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLRANVPDGRPDLVNRDFTAPAPHRLWVADITYVRTLTGFAYTAFITDVYSRKIVGMA
CCEEECCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRASMRTDELPLEAFEHALYHAGDLRSEGLVHHSDRGLQYVSIRYGEALALAGVDPSVGT
HHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCEEEEEEECCCEEEEECCCCCCCC
VGDSYDNALAETVNGLYKTELIYPHRPWTSVGEVEIATLRWVHWWNNQRLHQSLGYFTPQ
CCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHCCCCHH
EMEHAYDQRSGAQTLGVN
HHHHHHHHHCCCEECCCC
>Mature Secondary Structure 
TTLRANVPDGRPDLVNRDFTAPAPHRLWVADITYVRTLTGFAYTAFITDVYSRKIVGMA
CEEECCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRASMRTDELPLEAFEHALYHAGDLRSEGLVHHSDRGLQYVSIRYGEALALAGVDPSVGT
HHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCEEEEEEECCCEEEEECCCCCCCC
VGDSYDNALAETVNGLYKTELIYPHRPWTSVGEVEIATLRWVHWWNNQRLHQSLGYFTPQ
CCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHCCCCHH
EMEHAYDQRSGAQTLGVN
HHHHHHHHHCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]