| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is blc [C]
Identifier: 77761102
GI number: 77761102
Start: 786144
End: 786713
Strand: Reverse
Name: blc [C]
Synonym: XC_0652
Alternate gene names: 77761102
Gene position: 786713-786144 (Counterclockwise)
Preceding gene: 66766995
Following gene: 66766988
Centisome position: 15.28
GC content: 64.56
Gene sequence:
>570_bases ATGCGCCTGACCGTTTCGATCGCCCTCGCTTTCCTGCTCGTGCTTGGCCTGCCCACGGCGCAGGCCAAGGACACACCGAC CACGGAGCGGCCGATCGATCTGTCCAAGATCATGGGCACCTGGTACGTGATTGCACGCATGCCCAACCCGGTCGAGCGCG GCCATGTGGCCAGCCGCGACGAATACACCCTGGTGGAAGACGGCAAGGTGGCGGTGCGCTATCGCTACCGCGAAGGCTTC GAGGAGCCGGAAAAGGAAGTCAACGCGCGCGCCTCGGTGGACGCGGACAGCGGCAACCGCGATTGGCGGGTGTGGTTCTA CAAGGTCATTCCGGCCAAGCAGCGCATCCTGGAAATTGCACCCGACGGGTCGTGGATGCTGATCTCCTACCCCGGCCGCG ATCTGGCCTGGATCTTCGCGCGCAAGCCGGACATGAGCCGCGACCAGTACCGCACCCTGGTCAACAAGATGCGCGACGAC TACGCCATCTACACCGACAAACTCAAGCGCGTGCCGCAGCTGCCCGAACAGGTAGGCCGGCTGGGCTTCGAAGTCCCCGA CAAGCGCTGA
Upstream 100 bases:
>100_bases GGTCCAGCGGCGTTTGTCGACGCCAGGCGCAACCGTTGACGCGAACTTGCCCCCTGCATGCGGTAGTGTGCTGACCCAAC TGACCCTCTGTGACTTTGCG
Downstream 100 bases:
>100_bases TTGGCGCCCGCGCACGCGGCCATGCCAGCGTGCGCTCCCCGGCGTTGCCCGCCGGGCTTGGAGCCGCGATCAAAACGACT GCGCAGCCGCCAGGGCGCGC
Product: outer membrane lipoprotein
Products: NA
Alternate protein names: Outer Membrane Lipoprotein; Outer Membrane Lipoprotein Blc; Lipocalin-Like Domain; Outer Membrane Lipoprotein Lipocalin Blc Like; Lipocalin Protein; Lipocalin-Like Protein
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MRLTVSIALAFLLVLGLPTAQAKDTPTTERPIDLSKIMGTWYVIARMPNPVERGHVASRDEYTLVEDGKVAVRYRYREGF EEPEKEVNARASVDADSGNRDWRVWFYKVIPAKQRILEIAPDGSWMLISYPGRDLAWIFARKPDMSRDQYRTLVNKMRDD YAIYTDKLKRVPQLPEQVGRLGFEVPDKR
Sequences:
>Translated_189_residues MRLTVSIALAFLLVLGLPTAQAKDTPTTERPIDLSKIMGTWYVIARMPNPVERGHVASRDEYTLVEDGKVAVRYRYREGF EEPEKEVNARASVDADSGNRDWRVWFYKVIPAKQRILEIAPDGSWMLISYPGRDLAWIFARKPDMSRDQYRTLVNKMRDD YAIYTDKLKRVPQLPEQVGRLGFEVPDKR >Mature_189_residues MRLTVSIALAFLLVLGLPTAQAKDTPTTERPIDLSKIMGTWYVIARMPNPVERGHVASRDEYTLVEDGKVAVRYRYREGF EEPEKEVNARASVDADSGNRDWRVWFYKVIPAKQRILEIAPDGSWMLISYPGRDLAWIFARKPDMSRDQYRTLVNKMRDD YAIYTDKLKRVPQLPEQVGRLGFEVPDKR
Specific function: May Serve A Starvation Response Function In E. Coli. [C]
COG id: COG3040
COG function: function code M; Bacterial lipocalin
Gene ontology:
Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21905; Mature: 21905
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTVSIALAFLLVLGLPTAQAKDTPTTERPIDLSKIMGTWYVIARMPNPVERGHVASRD CEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEECCCHHHHCCCCCCC EYTLVEDGKVAVRYRYREGFEEPEKEVNARASVDADSGNRDWRVWFYKVIPAKQRILEIA CEEEEECCCEEEEEEHHCCCCCHHHHCCCCEEECCCCCCCCEEEEEEEECCCCHHEEEEC PDGSWMLISYPGRDLAWIFARKPDMSRDQYRTLVNKMRDDYAIYTDKLKRVPQLPEQVGR CCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHH LGFEVPDKR CCCCCCCCC >Mature Secondary Structure MRLTVSIALAFLLVLGLPTAQAKDTPTTERPIDLSKIMGTWYVIARMPNPVERGHVASRD CEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEECCCHHHHCCCCCCC EYTLVEDGKVAVRYRYREGFEEPEKEVNARASVDADSGNRDWRVWFYKVIPAKQRILEIA CEEEEECCCEEEEEEHHCCCCCHHHHCCCCEEECCCCCCCCEEEEEEEECCCCHHEEEEC PDGSWMLISYPGRDLAWIFARKPDMSRDQYRTLVNKMRDDYAIYTDKLKRVPQLPEQVGR CCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHH LGFEVPDKR CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA