Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
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Accession | NC_007086 |
Length | 5,148,708 |
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The map label for this gene is 77761096
Identifier: 77761096
GI number: 77761096
Start: 675258
End: 676517
Strand: Reverse
Name: 77761096
Synonym: XC_0563
Alternate gene names: NA
Gene position: 676517-675258 (Counterclockwise)
Preceding gene: 66766903
Following gene: 66766893
Centisome position: 13.14
GC content: 56.11
Gene sequence:
>1260_bases GTGGCAGACAACTTCTTTCTTTCAACGACCTCGCTCCGCGACGGCAAGGCCGGATTTAGCAGCAATGATCGGCTTGAGAA AGCATGCGTGAAAGCGGAGAGCTATCACGCGCGGTATCACAGCGCTACCGAAGGAGAACGCGCATCGCACAGCCGTCCCT TCGTACCGATCAGAACGTGCGGGTCCAACCAGTTCGCCACCATGAGCGACTACCGTGCGGCGACCAAGGTTCATATCGGC CACCTCTTCGACAGCCAGCACGCACGGCAATCGCTGCTCACCAACCTTGCCTGCCTCAAGGGCGAGCGCATCAGGGACGA GTGCATTGCCCAGTACGCCCCTACGCATGTCCCGGCCAATCCGGACCTGAGTAGAAGCCCGCTCTACGAAACCAAGAACA AGTACTCTCTGACCGGCGTACCCAATGCTCAGACCGGTGCAAGCGGATATACCTCACGATCAATCACCCAGCCCTTCATC AATCGCGGCATGCAGCATTTCAAGCAGGATTCCCAGAGCGACAGAGCGTTGTCGCTCAAACAGTGCATGGAATTGCTTGA ACGTACACTGGAGGGCGACGACAAACTTGGCAAGCAGGCACAACACGCTGCCGGCCAAGCGATCCTGAATTTCCGTCAGG TGTATGCCGCCGACGAGCATTGGGGCCACCCCGAAAAAGTCATCATGAAAACGCTGATCGCCAACGGGCTGCTATCGCAG GAGCAAACGGACAGGATCGATGCGACCCTGATGTTCGAAGATCCGTCCATCAGCGTATTGAAAAAAAACACCAGTGTCGC CGGGCCGTTATTGCAACATTTGGAAACGAAGTTCCAGTCCAGGCGCCTGCAGGATCGACCCGAAGCTCTTGCAGACTTCA TGGAGATGGCGAAACAGAAGAATATGGAAGGCCTGCCGATCGTGCACTTCAAGCTCAACGCGCAAGGCAATGGCTTCGAA GACTGTTCCGGGTTAGGCGATTCATTCACCAGCGCAAATGCCGTTGCATGCATCAACCACGCACGCTTGATGAGCGGTGA GCCCCGTCTTTCCAAACAGGATGTAGGGGTAGTGGTGGCATGCCTCAATGCTGTATACGACGATGCGAGCAGCGTCAGGC ATACGTTGCATGAAATCGCGCGCGGATGCTTCGTCGGAGCCGGCTACACCACCGAGGATGCCGATGTATTTTACGAGAAT GTCTGTAAGGATGCTGCACAGGCGTTCTATGCAGGAAGGTCCATGACCAGAAACGCCTAG
Upstream 100 bases:
>100_bases CAATACGCAGGACGGTACACCAAAGAATGGCAGAGACCATGGCGGACAGTGGGCAACACGAGCTGCCAAGTACGCTCTTG GCATTGCTGGCGCAGGCTAT
Downstream 100 bases:
>100_bases ACCCGAGCGAGTGCTGATGCGTAGCGCACAAGGACTGCCGGGCGTGCCGCACTGCGGAGAACGGCTGGCTCCGCCGACGT CTTTAGGCACCTTTTCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MADNFFLSTTSLRDGKAGFSSNDRLEKACVKAESYHARYHSATEGERASHSRPFVPIRTCGSNQFATMSDYRAATKVHIG HLFDSQHARQSLLTNLACLKGERIRDECIAQYAPTHVPANPDLSRSPLYETKNKYSLTGVPNAQTGASGYTSRSITQPFI NRGMQHFKQDSQSDRALSLKQCMELLERTLEGDDKLGKQAQHAAGQAILNFRQVYAADEHWGHPEKVIMKTLIANGLLSQ EQTDRIDATLMFEDPSISVLKKNTSVAGPLLQHLETKFQSRRLQDRPEALADFMEMAKQKNMEGLPIVHFKLNAQGNGFE DCSGLGDSFTSANAVACINHARLMSGEPRLSKQDVGVVVACLNAVYDDASSVRHTLHEIARGCFVGAGYTTEDADVFYEN VCKDAAQAFYAGRSMTRNA
Sequences:
>Translated_419_residues MADNFFLSTTSLRDGKAGFSSNDRLEKACVKAESYHARYHSATEGERASHSRPFVPIRTCGSNQFATMSDYRAATKVHIG HLFDSQHARQSLLTNLACLKGERIRDECIAQYAPTHVPANPDLSRSPLYETKNKYSLTGVPNAQTGASGYTSRSITQPFI NRGMQHFKQDSQSDRALSLKQCMELLERTLEGDDKLGKQAQHAAGQAILNFRQVYAADEHWGHPEKVIMKTLIANGLLSQ EQTDRIDATLMFEDPSISVLKKNTSVAGPLLQHLETKFQSRRLQDRPEALADFMEMAKQKNMEGLPIVHFKLNAQGNGFE DCSGLGDSFTSANAVACINHARLMSGEPRLSKQDVGVVVACLNAVYDDASSVRHTLHEIARGCFVGAGYTTEDADVFYEN VCKDAAQAFYAGRSMTRNA >Mature_418_residues ADNFFLSTTSLRDGKAGFSSNDRLEKACVKAESYHARYHSATEGERASHSRPFVPIRTCGSNQFATMSDYRAATKVHIGH LFDSQHARQSLLTNLACLKGERIRDECIAQYAPTHVPANPDLSRSPLYETKNKYSLTGVPNAQTGASGYTSRSITQPFIN RGMQHFKQDSQSDRALSLKQCMELLERTLEGDDKLGKQAQHAAGQAILNFRQVYAADEHWGHPEKVIMKTLIANGLLSQE QTDRIDATLMFEDPSISVLKKNTSVAGPLLQHLETKFQSRRLQDRPEALADFMEMAKQKNMEGLPIVHFKLNAQGNGFED CSGLGDSFTSANAVACINHARLMSGEPRLSKQDVGVVVACLNAVYDDASSVRHTLHEIARGCFVGAGYTTEDADVFYENV CKDAAQAFYAGRSMTRNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46279; Mature: 46148
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADNFFLSTTSLRDGKAGFSSNDRLEKACVKAESYHARYHSATEGERASHSRPFVPIRTC CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEC GSNQFATMSDYRAATKVHIGHLFDSQHARQSLLTNLACLKGERIRDECIAQYAPTHVPAN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC PDLSRSPLYETKNKYSLTGVPNAQTGASGYTSRSITQPFINRGMQHFKQDSQSDRALSLK CCCCCCCCHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH QCMELLERTLEGDDKLGKQAQHAAGQAILNFRQVYAADEHWGHPEKVIMKTLIANGLLSQ HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHHHHCCC EQTDRIDATLMFEDPSISVLKKNTSVAGPLLQHLETKFQSRRLQDRPEALADFMEMAKQK HHHCCCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC NMEGLPIVHFKLNAQGNGFEDCSGLGDSFTSANAVACINHARLMSGEPRLSKQDVGVVVA CCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH CLNAVYDDASSVRHTLHEIARGCFVGAGYTTEDADVFYENVCKDAAQAFYAGRSMTRNA HHHHHHCCHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCC >Mature Secondary Structure ADNFFLSTTSLRDGKAGFSSNDRLEKACVKAESYHARYHSATEGERASHSRPFVPIRTC CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEC GSNQFATMSDYRAATKVHIGHLFDSQHARQSLLTNLACLKGERIRDECIAQYAPTHVPAN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC PDLSRSPLYETKNKYSLTGVPNAQTGASGYTSRSITQPFINRGMQHFKQDSQSDRALSLK CCCCCCCCHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH QCMELLERTLEGDDKLGKQAQHAAGQAILNFRQVYAADEHWGHPEKVIMKTLIANGLLSQ HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHHHHCCC EQTDRIDATLMFEDPSISVLKKNTSVAGPLLQHLETKFQSRRLQDRPEALADFMEMAKQK HHHCCCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC NMEGLPIVHFKLNAQGNGFEDCSGLGDSFTSANAVACINHARLMSGEPRLSKQDVGVVVA CCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH CLNAVYDDASSVRHTLHEIARGCFVGAGYTTEDADVFYENVCKDAAQAFYAGRSMTRNA HHHHHHCCHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA