Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
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Accession | NC_007086 |
Length | 5,148,708 |
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The map label for this gene is 66766893
Identifier: 66766893
GI number: 66766893
Start: 664251
End: 664769
Strand: Reverse
Name: 66766893
Synonym: XC_0555
Alternate gene names: NA
Gene position: 664769-664251 (Counterclockwise)
Preceding gene: 77761096
Following gene: 66766892
Centisome position: 12.91
GC content: 70.33
Gene sequence:
>519_bases ATGTCGCCCACCCTGTTGCCCGCCGTGGCCCTGCCCTCGCAGGTCGCGCTGCATAACGACGGTACCGATCAGTCCCTGCC GCCTAACCTGCCGTTCCTGCACCTGTGGACCGGCCCGGACGGGCTGAGCCGGCTCAATGCCTCGCAGTTGGCCGGCTTCC AGAGCAAAAGCGTGGGCGGTGGCGCGGCGCCGCAGTGGCTGCGGCCGTTTCCCGGCGAGGTGGTGGGCGTGCAGTTTGCG GTGCTGCCGGTGGGCTGGGTCGGCGACTGGCACGAAAGCCCGCACCCGCAGTGGGTGATCGCGCTGCGCGGGCGCTGGTT CATCGAAACCGGCGACGGCACGCGCGTGGAGATGGGCCCCGGCGATATCCACTTCGGCCAGGACCAAGGCACCACCGACG CACGCGGCCACCGCTCCGGCCAACTGGGCGACACGCCCTGCCTGCAGATGATGGTGCAGTTTGCGCACTCCCCCGGCGTG GCGGCAGCGCATCCGTTCGATGAAACAGCGGCGCCATGA
Upstream 100 bases:
>100_bases GTCCACAGTCGCCCTGTGCACCGGTTCGACCTTTTACGCCTCGCAGACAACGCCCTGACAAACGCCATGCTGCACTGCGG TTTTCGCACGAGGTCACCGC
Downstream 100 bases:
>100_bases TGGACAGCCATTGCCGCGTCCGCCCGGCCGGCCCGGCCGTTCCCGCCGACTGCGACCCGCCCCGCACCACGCACGCCGCG CTGGCCGCACGGTTGGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MSPTLLPAVALPSQVALHNDGTDQSLPPNLPFLHLWTGPDGLSRLNASQLAGFQSKSVGGGAAPQWLRPFPGEVVGVQFA VLPVGWVGDWHESPHPQWVIALRGRWFIETGDGTRVEMGPGDIHFGQDQGTTDARGHRSGQLGDTPCLQMMVQFAHSPGV AAAHPFDETAAP
Sequences:
>Translated_172_residues MSPTLLPAVALPSQVALHNDGTDQSLPPNLPFLHLWTGPDGLSRLNASQLAGFQSKSVGGGAAPQWLRPFPGEVVGVQFA VLPVGWVGDWHESPHPQWVIALRGRWFIETGDGTRVEMGPGDIHFGQDQGTTDARGHRSGQLGDTPCLQMMVQFAHSPGV AAAHPFDETAAP >Mature_171_residues SPTLLPAVALPSQVALHNDGTDQSLPPNLPFLHLWTGPDGLSRLNASQLAGFQSKSVGGGAAPQWLRPFPGEVVGVQFAV LPVGWVGDWHESPHPQWVIALRGRWFIETGDGTRVEMGPGDIHFGQDQGTTDARGHRSGQLGDTPCLQMMVQFAHSPGVA AAHPFDETAAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18296; Mature: 18165
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPTLLPAVALPSQVALHNDGTDQSLPPNLPFLHLWTGPDGLSRLNASQLAGFQSKSVGG CCCCCCCHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCHHHHCCHHHHCCCCCCCCCC GAAPQWLRPFPGEVVGVQFAVLPVGWVGDWHESPHPQWVIALRGRWFIETGDGTRVEMGP CCCCHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEECCEEEEECCCCCEEEECC GDIHFGQDQGTTDARGHRSGQLGDTPCLQMMVQFAHSPGVAAAHPFDETAAP CCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SPTLLPAVALPSQVALHNDGTDQSLPPNLPFLHLWTGPDGLSRLNASQLAGFQSKSVGG CCCCCCHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCHHHHCCHHHHCCCCCCCCCC GAAPQWLRPFPGEVVGVQFAVLPVGWVGDWHESPHPQWVIALRGRWFIETGDGTRVEMGP CCCCHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEECCEEEEECCCCCEEEECC GDIHFGQDQGTTDARGHRSGQLGDTPCLQMMVQFAHSPGVAAAHPFDETAAP CCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA