| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
Click here to switch to the map view.
The map label for this gene is 66766955
Identifier: 66766955
GI number: 66766955
Start: 735393
End: 736244
Strand: Reverse
Name: 66766955
Synonym: XC_0617
Alternate gene names: NA
Gene position: 736244-735393 (Counterclockwise)
Preceding gene: 66766957
Following gene: 66766951
Centisome position: 14.3
GC content: 62.32
Gene sequence:
>852_bases ATGTCGCATGCACGCACCGCTACGCACAGATCCACGCTGCCAATACCGGCGCCTGCCGTACAGCACACGATGAGGATTGA GCGCGTGCAGATCGCGCTTGAGCGGGCAATGCCGCATGCATCTGACGACGGCCGCTATACTACGTGCCGTAGCGCACCCG CATCGCGGGATGGACCCCAGCGCTGCTTCGTATCAAGGAAGATCGTCCGCATCGGTTGCGATGCTGCAGGCCGTTGGCGC TTCCTTGGTGTTCTCCTGTTCGCTGCGGCCCTGCCGCGGAAAACCCGTACCAAGGACTCTGCTTTGAAGACTTTCACCGC GTTTGTCGTGCTTTCTTTCAGCCTGCTGCTGTCTGCCTGTGGCGGAAGCGATCTCGCCAGCGGCGCCTCCAAGATGTCCT CCAGCGACTATCTCCTGCATAACATCTCGGTCTGGAACGGCGTGGTCAAAATCGTCGACCCATGGGTGTCGGGCGAGCGT GGGCAGTCGCTGATGGCCGATGCCATCGCACACAAGCCGCTGGAGCAGTACAAGATTGCACTGGCCGGCCAGCGCAAGGC CCTGGCCGCCAATACGCAGGCCAACACGATGATGGCCTCGGGCGTGCCCGATAACGCCAAGGAGCTGGATGCCAAGCTGG TTGCCACCCTCAAGAGCGCCGACGCCACCATGGCCGCGATGGAGCAGATTGCCGCGTTGCCGGATGGCTACACCAACGAG ACCCTGGCACCGCTGGGCAAGCAGCTGCAGACCACCGCCAACGGCCTGGTGGCCGACATCCAGGCCTTGAACACGGCGCA GCGTGCGTATTCCAAGGAACATAACGTGCCGTTCCAGGAAGTGCAGCAGTAA
Upstream 100 bases:
>100_bases GCGATGCGCTCCTTGCGTGAGTTGGGTGCTGGTACAACTGCACGGCGACGGGGTGGTTTCAACGTAGTGCCACTGCAACG AATCGTTCGCCAGTTTACCG
Downstream 100 bases:
>100_bases CAGCAGAGACGACTGCGCACTGCAGTCGTCACCACGCGCCCGGTACATGGCATCGGCAGACACCACGGTGTGCTGCCGCT GCCATGTACCGGGCGTGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MSHARTATHRSTLPIPAPAVQHTMRIERVQIALERAMPHASDDGRYTTCRSAPASRDGPQRCFVSRKIVRIGCDAAGRWR FLGVLLFAAALPRKTRTKDSALKTFTAFVVLSFSLLLSACGGSDLASGASKMSSSDYLLHNISVWNGVVKIVDPWVSGER GQSLMADAIAHKPLEQYKIALAGQRKALAANTQANTMMASGVPDNAKELDAKLVATLKSADATMAAMEQIAALPDGYTNE TLAPLGKQLQTTANGLVADIQALNTAQRAYSKEHNVPFQEVQQ
Sequences:
>Translated_283_residues MSHARTATHRSTLPIPAPAVQHTMRIERVQIALERAMPHASDDGRYTTCRSAPASRDGPQRCFVSRKIVRIGCDAAGRWR FLGVLLFAAALPRKTRTKDSALKTFTAFVVLSFSLLLSACGGSDLASGASKMSSSDYLLHNISVWNGVVKIVDPWVSGER GQSLMADAIAHKPLEQYKIALAGQRKALAANTQANTMMASGVPDNAKELDAKLVATLKSADATMAAMEQIAALPDGYTNE TLAPLGKQLQTTANGLVADIQALNTAQRAYSKEHNVPFQEVQQ >Mature_282_residues SHARTATHRSTLPIPAPAVQHTMRIERVQIALERAMPHASDDGRYTTCRSAPASRDGPQRCFVSRKIVRIGCDAAGRWRF LGVLLFAAALPRKTRTKDSALKTFTAFVVLSFSLLLSACGGSDLASGASKMSSSDYLLHNISVWNGVVKIVDPWVSGERG QSLMADAIAHKPLEQYKIALAGQRKALAANTQANTMMASGVPDNAKELDAKLVATLKSADATMAAMEQIAALPDGYTNET LAPLGKQLQTTANGLVADIQALNTAQRAYSKEHNVPFQEVQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30429; Mature: 30298
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHARTATHRSTLPIPAPAVQHTMRIERVQIALERAMPHASDDGRYTTCRSAPASRDGPQ CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHH RCFVSRKIVRIGCDAAGRWRFLGVLLFAAALPRKTRTKDSALKTFTAFVVLSFSLLLSAC HHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC GGSDLASGASKMSSSDYLLHNISVWNGVVKIVDPWVSGERGQSLMADAIAHKPLEQYKIA CCCHHHHHHHHCCCCCHHEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHH LAGQRKALAANTQANTMMASGVPDNAKELDAKLVATLKSADATMAAMEQIAALPDGYTNE HCCCCHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TLAPLGKQLQTTANGLVADIQALNTAQRAYSKEHNVPFQEVQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC >Mature Secondary Structure SHARTATHRSTLPIPAPAVQHTMRIERVQIALERAMPHASDDGRYTTCRSAPASRDGPQ CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHH RCFVSRKIVRIGCDAAGRWRFLGVLLFAAALPRKTRTKDSALKTFTAFVVLSFSLLLSAC HHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC GGSDLASGASKMSSSDYLLHNISVWNGVVKIVDPWVSGERGQSLMADAIAHKPLEQYKIA CCCHHHHHHHHCCCCCHHEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHH LAGQRKALAANTQANTMMASGVPDNAKELDAKLVATLKSADATMAAMEQIAALPDGYTNE HCCCCHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TLAPLGKQLQTTANGLVADIQALNTAQRAYSKEHNVPFQEVQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA