| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is yaiW [H]
Identifier: 66766951
GI number: 66766951
Start: 729378
End: 730469
Strand: Reverse
Name: yaiW [H]
Synonym: XC_0612
Alternate gene names: 66766951
Gene position: 730469-729378 (Counterclockwise)
Preceding gene: 66766955
Following gene: 77761099
Centisome position: 14.19
GC content: 70.6
Gene sequence:
>1092_bases GTGACCCGTTCGATTCCGCGCCTGTTGGCGCTTGGCGTGCTCGCCCTGTTGTCGGCCTGTGCGACGCAGGCGCCCCGCAC GCCGCAACGCTCGCCACAGGCCGTGCAGGCCGATATCGCGCGCCGCCTGCCGGCATCGGTCAGCGACCGCGCCGGCTGGG CCCGCGACGTCTACGTGGCGCTTGCCTCGCAGGACATCGCCACCACGCCCGAACACATCTGCGCGGTGCTGGCGGTCACC GAGCAGGAGTCCACCTATCAGGCCAATCCGCCGGTGCCGAACCTGGGCAAGATTTCGCGCGCGGAGATCGACCGCCGCGC CAGCGCCCACCACCTGCCCGGCTTCATGGTCGATGCCGCGCTGCGCATCACCTCGCCCGATGGCCGCAGCTATGCCACCC GCATTGCCGCTGCGCGCACCGAGCAGGAGCTGAGCGGCATCTTCGAAGACTTCGCCGGCAGCGTGCCGCTGGGTGGGCGT TTGTTTGGCGGGCTCAATCCGGTGCGCACCGGCGGGCCGATGCAGGTGAGCATCGCCTTCGCCGAGCAGCATGCCGACCG CTACCCCTACCCGCCTGACGACTCCATCCGGCATGAGGTATTCAGCCGCCGCGGCGGGCTGTGGTTCGGCACCCGGCATT TGCTGGGCTACCCCGCCCGCTACGACGCGCTGCTGTACCGCTTTGCCGACTTCAATGCCGGCTGGTACGCCAGCCGCAAT GCCGCGTTCCAGACCGCGCTGAGCAAGGCCAGCGGCATCGCGCTGGCGCTGGATGGCGACCTGCTCACCCCGGGCGCCAG CCTGGACGCACCCGGCGGCACCGAACGCGCCGCACGGGCGCTGGCCAGCCAGCTGGGCATGAATGACCGCCAGATCCGCG CCGCGCTCGAAGACGGCAACCGCGCCGATTTCGGCGACAGCACACTGTATCGCCAGGTCTTCGCGCTGGCCGAGCGCGAC GGCCGCGCGGCGCTGCCACGCGCGGTGCTGCCGGGCATCACCCTGGAGAGCCCCAAGATCACCCGCACCCTCACCACCGC CTGGTTTGCCCAACGCGTCAACGACCGTTGGAAGCGCTGCATGGCCAAGTAG
Upstream 100 bases:
>100_bases GCAAGCCGTGCATGCGCCTGCCGCCGCCATCTGCCATCCGCCAACACCGCGCCACGTAAACTGCCACCCGGCAGTACCAC CCGCCTTTCCCGGAGACGCC
Downstream 100 bases:
>100_bases CAGCACCCGCTGCGGGGCACGCGGCGCCTCTGGCACCATGCCCGTAGCTGCGCGCCGTGGCAAAGCACGACGTATGGCAG GGTCACAGGCCCCGCCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MTRSIPRLLALGVLALLSACATQAPRTPQRSPQAVQADIARRLPASVSDRAGWARDVYVALASQDIATTPEHICAVLAVT EQESTYQANPPVPNLGKISRAEIDRRASAHHLPGFMVDAALRITSPDGRSYATRIAAARTEQELSGIFEDFAGSVPLGGR LFGGLNPVRTGGPMQVSIAFAEQHADRYPYPPDDSIRHEVFSRRGGLWFGTRHLLGYPARYDALLYRFADFNAGWYASRN AAFQTALSKASGIALALDGDLLTPGASLDAPGGTERAARALASQLGMNDRQIRAALEDGNRADFGDSTLYRQVFALAERD GRAALPRAVLPGITLESPKITRTLTTAWFAQRVNDRWKRCMAK
Sequences:
>Translated_363_residues MTRSIPRLLALGVLALLSACATQAPRTPQRSPQAVQADIARRLPASVSDRAGWARDVYVALASQDIATTPEHICAVLAVT EQESTYQANPPVPNLGKISRAEIDRRASAHHLPGFMVDAALRITSPDGRSYATRIAAARTEQELSGIFEDFAGSVPLGGR LFGGLNPVRTGGPMQVSIAFAEQHADRYPYPPDDSIRHEVFSRRGGLWFGTRHLLGYPARYDALLYRFADFNAGWYASRN AAFQTALSKASGIALALDGDLLTPGASLDAPGGTERAARALASQLGMNDRQIRAALEDGNRADFGDSTLYRQVFALAERD GRAALPRAVLPGITLESPKITRTLTTAWFAQRVNDRWKRCMAK >Mature_362_residues TRSIPRLLALGVLALLSACATQAPRTPQRSPQAVQADIARRLPASVSDRAGWARDVYVALASQDIATTPEHICAVLAVTE QESTYQANPPVPNLGKISRAEIDRRASAHHLPGFMVDAALRITSPDGRSYATRIAAARTEQELSGIFEDFAGSVPLGGRL FGGLNPVRTGGPMQVSIAFAEQHADRYPYPPDDSIRHEVFSRRGGLWFGTRHLLGYPARYDALLYRFADFNAGWYASRNA AFQTALSKASGIALALDGDLLTPGASLDAPGGTERAARALASQLGMNDRQIRAALEDGNRADFGDSTLYRQVFALAERDG RAALPRAVLPGITLESPKITRTLTTAWFAQRVNDRWKRCMAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786576, Length=346, Percent_Identity=57.8034682080925, Blast_Score=415, Evalue=1e-117,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011673 - ProDom: PD041438 [H]
Pfam domain/function: PF07759 DUF1615 [H]
EC number: NA
Molecular weight: Translated: 39341; Mature: 39210
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSIPRLLALGVLALLSACATQAPRTPQRSPQAVQADIARRLPASVSDRAGWARDVYVA CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCHHHHEEE LASQDIATTPEHICAVLAVTEQESTYQANPPVPNLGKISRAEIDRRASAHHLPGFMVDAA EECCCCCCCHHHHHHHHEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEE LRITSPDGRSYATRIAAARTEQELSGIFEDFAGSVPLGGRLFGGLNPVRTGGPMQVSIAF EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCEEEEEEE AEQHADRYPYPPDDSIRHEVFSRRGGLWFGTRHLLGYPARYDALLYRFADFNAGWYASRN HHHHCCCCCCCCCHHHHHHHHHHCCCCEEECHHHHCCCHHHHHHHHHHHCCCCCEECCCC AAFQTALSKASGIALALDGDLLTPGASLDAPGGTERAARALASQLGMNDRQIRAALEDGN HHHHHHHHHHCCEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCC RADFGDSTLYRQVFALAERDGRAALPRAVLPGITLESPKITRTLTTAWFAQRVNDRWKRC CCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH MAK HCC >Mature Secondary Structure TRSIPRLLALGVLALLSACATQAPRTPQRSPQAVQADIARRLPASVSDRAGWARDVYVA CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCHHHHEEE LASQDIATTPEHICAVLAVTEQESTYQANPPVPNLGKISRAEIDRRASAHHLPGFMVDAA EECCCCCCCHHHHHHHHEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEE LRITSPDGRSYATRIAAARTEQELSGIFEDFAGSVPLGGRLFGGLNPVRTGGPMQVSIAF EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCEEEEEEE AEQHADRYPYPPDDSIRHEVFSRRGGLWFGTRHLLGYPARYDALLYRFADFNAGWYASRN HHHHCCCCCCCCCHHHHHHHHHHCCCCEEECHHHHCCCHHHHHHHHHHHCCCCCEECCCC AAFQTALSKASGIALALDGDLLTPGASLDAPGGTERAARALASQLGMNDRQIRAALEDGN HHHHHHHHHHCCEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCC RADFGDSTLYRQVFALAERDGRAALPRAVLPGITLESPKITRTLTTAWFAQRVNDRWKRC CCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH MAK HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]