| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 66766737
Identifier: 66766737
GI number: 66766737
Start: 456197
End: 457102
Strand: Reverse
Name: 66766737
Synonym: XC_0394
Alternate gene names: NA
Gene position: 457102-456197 (Counterclockwise)
Preceding gene: 66766738
Following gene: 66766733
Centisome position: 8.88
GC content: 66.0
Gene sequence:
>906_bases ATGTTGAAGTGGCTCATCATCGCGCTGTTCATTGCCTCAGCGCTGTACATCCATTACCGCGGTCGCGTGCGCCACCGGCT CAGCCGGCAGCTGCTGGACCATTCCACCTTCATGGCCCCGATCAACACGCTGATGTATCTGTGTTCGCGGGTGCCGACCA CGCCGTTCATCGATCCGGGCAAGGAATTTCCGGAGCTGGCCCCGTTGCGCGCGAACTGGACGCTGATTCGCGACGAGGCA GTGGCGCTGCAGCAGATGCAGAAGATCCGTGCTGCCGACGGCTACACCGACATCGGCTTCAATTCGTTCTTCCGCCGCGG CTGGAAGCGCTTCTACCTGAAGTGGTACGGCACCGCGCACCCGTCGGCGGCCGAGCTGTGCCCGCAGACCACCGCGCTGC TGCGCTCCATTCCCACGGTCAAGGCGGCGATGTTCGCCGAGCTGCCGCCGGGCAGCGAACTGCGTCCGCACCGCGACCCG TTCGCCGGCTCCATGCGGCTGCACCTGGGCCTGGCCACGCCCAATGACGACCGCTGCTTCATCGACGTCGACGGCCAGCG CCACAGCTGGCGCGACGGCGAGTGGACCATGTTCGACGAGACCTACATCCACCACGCGCGCAACGACACCGACCAGGACC GCATCATCCTGTTCTGCGATATCGAGCGCCCGATGCGCTGGCGCTGGGCGGCGGCGGTGAACCGCTTCGTCGGCCGCAGC CTGCTCTCGGCCGGCGCCTCGCCGAACCAGGAAGGCGACAAGACCGGCGGCATCAACCGGGTGTTCCGGTATTTCTACGC CGCCCGGCTCAAGGCCAAGGCGCTGAAGGAGCGCAACAACCCGCTCTACCAGACGCTCAAGTGGGGCATCTTCGTGCTGG TGGTCGTGGGCATCGTGCTGCTGTAA
Upstream 100 bases:
>100_bases CACAGTATTACCGCCGGGCCCATCCCGATCAGGCAGGCTCGGCGCTTGCAACCGGTAGAATTCACCAGTTAACGGCCCCC GCCCCCAACCGGCCTCCCCA
Downstream 100 bases:
>100_bases CGCAAACCACCACGCCCGTCAGCTACTGCAATGCCCGACCAACCACGTAGGAGCGCGCTCGCGCGATGTGGCGTTATCGA TAACGCTTCATTGCGCGCGA
Product: aspartyl/asparaginyl beta-hydroxylase
Products: NA
Alternate protein names: Beta-Hydroxylase; Asparaginyl Beta-Hydroxylase; Membrane-Bound Beta-Hydroxylase; Lipid A-Myristate Beta-Hydroxylase; Aspartyl-Asparaginyl Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Family Protein; Aspartyl/Asparaginyl Beta-Hydroxylase Family; Lipopolysaccharide Biosynthetic; Peptide-Aspartate Beta-Dioxygenase; Aspartyl/Asparaginyl Beta-Hydroxylase Transmembrane Protein; Beta-Hydroxylase Aspartyl/Asparaginyl Family; Peptide Aspartate B-Dioxygenase; Aspartyl/Asparaginyl-Beta-Hydroxylase; Hydroxylase; Peptide-Aspartate B-Dioxygenase; Aspartate Beta-Hydroxylase; Lipopolysaccharide Biosynthetic Protein; Fe(2+)/Alpha-Ketoglutarate-Dependent Dioxygenase LpxO; Dioxygenase; Aspartyl/Asparaginyl Beta-Hydroxylase Protein
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MLKWLIIALFIASALYIHYRGRVRHRLSRQLLDHSTFMAPINTLMYLCSRVPTTPFIDPGKEFPELAPLRANWTLIRDEA VALQQMQKIRAADGYTDIGFNSFFRRGWKRFYLKWYGTAHPSAAELCPQTTALLRSIPTVKAAMFAELPPGSELRPHRDP FAGSMRLHLGLATPNDDRCFIDVDGQRHSWRDGEWTMFDETYIHHARNDTDQDRIILFCDIERPMRWRWAAAVNRFVGRS LLSAGASPNQEGDKTGGINRVFRYFYAARLKAKALKERNNPLYQTLKWGIFVLVVVGIVLL
Sequences:
>Translated_301_residues MLKWLIIALFIASALYIHYRGRVRHRLSRQLLDHSTFMAPINTLMYLCSRVPTTPFIDPGKEFPELAPLRANWTLIRDEA VALQQMQKIRAADGYTDIGFNSFFRRGWKRFYLKWYGTAHPSAAELCPQTTALLRSIPTVKAAMFAELPPGSELRPHRDP FAGSMRLHLGLATPNDDRCFIDVDGQRHSWRDGEWTMFDETYIHHARNDTDQDRIILFCDIERPMRWRWAAAVNRFVGRS LLSAGASPNQEGDKTGGINRVFRYFYAARLKAKALKERNNPLYQTLKWGIFVLVVVGIVLL >Mature_301_residues MLKWLIIALFIASALYIHYRGRVRHRLSRQLLDHSTFMAPINTLMYLCSRVPTTPFIDPGKEFPELAPLRANWTLIRDEA VALQQMQKIRAADGYTDIGFNSFFRRGWKRFYLKWYGTAHPSAAELCPQTTALLRSIPTVKAAMFAELPPGSELRPHRDP FAGSMRLHLGLATPNDDRCFIDVDGQRHSWRDGEWTMFDETYIHHARNDTDQDRIILFCDIERPMRWRWAAAVNRFVGRS LLSAGASPNQEGDKTGGINRVFRYFYAARLKAKALKERNNPLYQTLKWGIFVLVVVGIVLL
Specific function: Unknown
COG id: COG3555
COG function: function code O; Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI194328779, Length=184, Percent_Identity=28.2608695652174, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI14589866, Length=161, Percent_Identity=27.9503105590062, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI258613943, Length=161, Percent_Identity=27.9503105590062, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI24654024, Length=197, Percent_Identity=26.3959390862944, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34727; Mature: 34727
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKWLIIALFIASALYIHYRGRVRHRLSRQLLDHSTFMAPINTLMYLCSRVPTTPFIDPG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC KEFPELAPLRANWTLIRDEAVALQQMQKIRAADGYTDIGFNSFFRRGWKRFYLKWYGTAH CCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEECCCC PSAAELCPQTTALLRSIPTVKAAMFAELPPGSELRPHRDPFAGSMRLHLGLATPNDDRCF CCHHHHCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEE IDVDGQRHSWRDGEWTMFDETYIHHARNDTDQDRIILFCDIERPMRWRWAAAVNRFVGRS EEECCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH LLSAGASPNQEGDKTGGINRVFRYFYAARLKAKALKERNNPLYQTLKWGIFVLVVVGIVL HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH L C >Mature Secondary Structure MLKWLIIALFIASALYIHYRGRVRHRLSRQLLDHSTFMAPINTLMYLCSRVPTTPFIDPG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC KEFPELAPLRANWTLIRDEAVALQQMQKIRAADGYTDIGFNSFFRRGWKRFYLKWYGTAH CCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEECCCC PSAAELCPQTTALLRSIPTVKAAMFAELPPGSELRPHRDPFAGSMRLHLGLATPNDDRCF CCHHHHCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEE IDVDGQRHSWRDGEWTMFDETYIHHARNDTDQDRIILFCDIERPMRWRWAAAVNRFVGRS EEECCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH LLSAGASPNQEGDKTGGINRVFRYFYAARLKAKALKERNNPLYQTLKWGIFVLVVVGIVL HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH L C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA