| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 66766464
Identifier: 66766464
GI number: 66766464
Start: 135205
End: 136578
Strand: Reverse
Name: 66766464
Synonym: XC_0115
Alternate gene names: NA
Gene position: 136578-135205 (Counterclockwise)
Preceding gene: 66766466
Following gene: 66766461
Centisome position: 2.65
GC content: 64.26
Gene sequence:
>1374_bases ATGCTCACCCATACCAACAATGCTTCCGACACCCCGACCGCCGAGGCGCACGATTCCCCGGTGTCGCTGTTCCGCCAGAC CGCCGCGCAGCGTCGCCAGGCCGATGCCGCCGCGCTGCAGGCCGCCGACTACGACCAGAAGCCCTGGGGCCTGCTGTACC GCGCGCTGACCGATGCCATCGGGGCCACCCCGGATACGTTCCAGATGGTCTATCCGTTCACGACCTGGGCTTGGCCGATG CAGCAGGCGGGCTTCATCGGCACCGCACAGTACGACTTCTGCTCCACGTCGCCGCAATGGAGCGCGGTCGGCGCCTTCGT GTCCAGCGGCGATCGCCTCAACCAGGCCTACCAGGAATTCCTCAACGTGATCCCGGCCGCGACCGACGACGCCTCACTGC GGCAGAAGATCAAAGCGGCCGACGACGCGCTGACCGCCGCCAGCAACGGCTACACCATCGCCTACAACCAGGCGCGCTCG GTGTATCAGGACGATGTCACCGACAACGACCCGACCTTCACCAAATGGCTGGGTTCGCCGGCCGGCGCCGGTTGGCAGAA CAAGATCAGCACCATGCAGGTCAAGATGGACCAGGCGCAGCTCACCTACAACGCGCTGGTCGTGCAGGCCAACACGCCGG GCCTGGGCGAGGCTCAGAAGCAGATGGCCAATGAGAACTTCTACGCCAAGCTCAACGATCCGGCGCTGTCCAAGTTCCCG CTGGTGCCTAACTGGTCGGTGGCACAAAGCGCCAGCGAGTGGATTGATGCGGTGCAGGCCGGCCAGGGCCCGGCGGGCGC CACCATGGGCTTCACCAACCGCGATGCGGCCTACGACTACAGCAAGACCTGGGCCGGCGGTTCGGCCAAGATTCGCCAGC TGTTCTGGGAAGTCCGAGTCGCCGGCAAGTGGCAGCGCATCGACGAGTTCGAGACCGACAACGAACTCGACGTTTCGGTG GAGTTCGAAGCGCTGGACCTGATCCAGATCCAGCCCAGCGACTGGTACAACGGCCCGTTCGTGCGCAGCAAGCGCAACGG CCCGTTCGTAAAGGGCTATAGCGCGTTCGGCGAGGACGGCACCCAGGCCGTGTTTGGCGAGAAGGGCTTCTTCGGTCTCC TCAAGACCGGTATGTACGTGGGCTACAAGCCGACCTTCACCATCACCACCAGCAAGTCGTCCTTCAGCAAGTTCTCCGAG ATGTTCAAGGTCTCGACCGGGCTGCGCATCGGCCCGTTCACCTTCGAAGCCGAAGGCGGCAGCGAAAAGGCCGGTTGGAG CCTGAGCGAATCAGGGCAAAGCTTCACCGGCACCACGACATCCGAGCAGCCGCTGATCGTCGGGATCGCAATTTCCAAGC TGCCGCAGGAGTAA
Upstream 100 bases:
>100_bases GGGCTGTGTCCGGCTCCGTGCCGACCGGACGCCACCGCCGCGATGTCGGCGGCCCCAGGCACCTGCCGCAGCAATCGCTG CGGTCCACCGAGACGCACCC
Downstream 100 bases:
>100_bases GCGCTGGCGGGCCGGCACGCCTGCAAGGGCGCACCGGCCCGCTGTCGGTACTCGCGGATCGCTGCAGCTGCGGCGCCGCG ATTTAGAGCAGCTATCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MLTHTNNASDTPTAEAHDSPVSLFRQTAAQRRQADAAALQAADYDQKPWGLLYRALTDAIGATPDTFQMVYPFTTWAWPM QQAGFIGTAQYDFCSTSPQWSAVGAFVSSGDRLNQAYQEFLNVIPAATDDASLRQKIKAADDALTAASNGYTIAYNQARS VYQDDVTDNDPTFTKWLGSPAGAGWQNKISTMQVKMDQAQLTYNALVVQANTPGLGEAQKQMANENFYAKLNDPALSKFP LVPNWSVAQSASEWIDAVQAGQGPAGATMGFTNRDAAYDYSKTWAGGSAKIRQLFWEVRVAGKWQRIDEFETDNELDVSV EFEALDLIQIQPSDWYNGPFVRSKRNGPFVKGYSAFGEDGTQAVFGEKGFFGLLKTGMYVGYKPTFTITTSKSSFSKFSE MFKVSTGLRIGPFTFEAEGGSEKAGWSLSESGQSFTGTTTSEQPLIVGIAISKLPQE
Sequences:
>Translated_457_residues MLTHTNNASDTPTAEAHDSPVSLFRQTAAQRRQADAAALQAADYDQKPWGLLYRALTDAIGATPDTFQMVYPFTTWAWPM QQAGFIGTAQYDFCSTSPQWSAVGAFVSSGDRLNQAYQEFLNVIPAATDDASLRQKIKAADDALTAASNGYTIAYNQARS VYQDDVTDNDPTFTKWLGSPAGAGWQNKISTMQVKMDQAQLTYNALVVQANTPGLGEAQKQMANENFYAKLNDPALSKFP LVPNWSVAQSASEWIDAVQAGQGPAGATMGFTNRDAAYDYSKTWAGGSAKIRQLFWEVRVAGKWQRIDEFETDNELDVSV EFEALDLIQIQPSDWYNGPFVRSKRNGPFVKGYSAFGEDGTQAVFGEKGFFGLLKTGMYVGYKPTFTITTSKSSFSKFSE MFKVSTGLRIGPFTFEAEGGSEKAGWSLSESGQSFTGTTTSEQPLIVGIAISKLPQE >Mature_457_residues MLTHTNNASDTPTAEAHDSPVSLFRQTAAQRRQADAAALQAADYDQKPWGLLYRALTDAIGATPDTFQMVYPFTTWAWPM QQAGFIGTAQYDFCSTSPQWSAVGAFVSSGDRLNQAYQEFLNVIPAATDDASLRQKIKAADDALTAASNGYTIAYNQARS VYQDDVTDNDPTFTKWLGSPAGAGWQNKISTMQVKMDQAQLTYNALVVQANTPGLGEAQKQMANENFYAKLNDPALSKFP LVPNWSVAQSASEWIDAVQAGQGPAGATMGFTNRDAAYDYSKTWAGGSAKIRQLFWEVRVAGKWQRIDEFETDNELDVSV EFEALDLIQIQPSDWYNGPFVRSKRNGPFVKGYSAFGEDGTQAVFGEKGFFGLLKTGMYVGYKPTFTITTSKSSFSKFSE MFKVSTGLRIGPFTFEAEGGSEKAGWSLSESGQSFTGTTTSEQPLIVGIAISKLPQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49925; Mature: 49925
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTHTNNASDTPTAEAHDSPVSLFRQTAAQRRQADAAALQAADYDQKPWGLLYRALTDAI CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH GATPDTFQMVYPFTTWAWPMQQAGFIGTAQYDFCSTSPQWSAVGAFVSSGDRLNQAYQEF CCCCCCEEEEECCCCCCCCHHHCCCEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHH LNVIPAATDDASLRQKIKAADDALTAASNGYTIAYNQARSVYQDDVTDNDPTFTKWLGSP HHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCCCHHHHCCCC AGAGWQNKISTMQVKMDQAQLTYNALVVQANTPGLGEAQKQMANENFYAKLNDPALSKFP CCCCCHHCCEEEEEEECHHEEEEEEEEEEECCCCCCHHHHHHCCCCCEEEECCCCCCCCC LVPNWSVAQSASEWIDAVQAGQGPAGATMGFTNRDAAYDYSKTWAGGSAKIRQLFWEVRV CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH AGKWQRIDEFETDNELDVSVEFEALDLIQIQPSDWYNGPFVRSKRNGPFVKGYSAFGEDG CCCHHHHHCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCEEECCCCCCEEECHHHCCCCC TQAVFGEKGFFGLLKTGMYVGYKPTFTITTSKSSFSKFSEMFKVSTGLRIGPFTFEAEGG CEEECCCCCHHHHHHCCEEECCCCEEEEEECCHHHHHHHHHHHHHCCCEECCEEEECCCC SEKAGWSLSESGQSFTGTTTSEQPLIVGIAISKLPQE CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC >Mature Secondary Structure MLTHTNNASDTPTAEAHDSPVSLFRQTAAQRRQADAAALQAADYDQKPWGLLYRALTDAI CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH GATPDTFQMVYPFTTWAWPMQQAGFIGTAQYDFCSTSPQWSAVGAFVSSGDRLNQAYQEF CCCCCCEEEEECCCCCCCCHHHCCCEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHH LNVIPAATDDASLRQKIKAADDALTAASNGYTIAYNQARSVYQDDVTDNDPTFTKWLGSP HHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCCCHHHHCCCC AGAGWQNKISTMQVKMDQAQLTYNALVVQANTPGLGEAQKQMANENFYAKLNDPALSKFP CCCCCHHCCEEEEEEECHHEEEEEEEEEEECCCCCCHHHHHHCCCCCEEEECCCCCCCCC LVPNWSVAQSASEWIDAVQAGQGPAGATMGFTNRDAAYDYSKTWAGGSAKIRQLFWEVRV CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH AGKWQRIDEFETDNELDVSVEFEALDLIQIQPSDWYNGPFVRSKRNGPFVKGYSAFGEDG CCCHHHHHCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCEEECCCCCCEEECHHHCCCCC TQAVFGEKGFFGLLKTGMYVGYKPTFTITTSKSSFSKFSEMFKVSTGLRIGPFTFEAEGG CEEECCCCCHHHHHHCCEEECCCCEEEEEECCHHHHHHHHHHHHHCCCEECCEEEECCCC SEKAGWSLSESGQSFTGTTTSEQPLIVGIAISKLPQE CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA