Definition Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome.
Accession NC_007086
Length 5,148,708

Click here to switch to the map view.

The map label for this gene is 66766466

Identifier: 66766466

GI number: 66766466

Start: 138186

End: 138569

Strand: Reverse

Name: 66766466

Synonym: XC_0117

Alternate gene names: NA

Gene position: 138569-138186 (Counterclockwise)

Preceding gene: 66766467

Following gene: 66766464

Centisome position: 2.69

GC content: 53.39

Gene sequence:

>384_bases
ATGACGGAACAAAAGGAAATGCACACGGAGCTCTCCGTTGCTTACGTCGATTTTGGCGGTAATACCGGGAAAGGCAAATA
CATCTATCGCTTTGAGCCCGACCTGATGCTTCTCGAGCCATTAGCGAGAAACGTGACGATCAAATATGCCTTCGACAAGG
CTGTGCCTTTCAACTTTCGCATCAGAAACCTGATCAGCTCGGACTCGCAGAACCAGATCAGTCAGATCAAGTACGACGGC
GATGGCCGCTGGGTCTCTTTCGTCAATGCCAATGACCGGGCCACACTGATCTTCTTCACCGTCATCGTCGAAGACATGCA
GCGCGAGACGCGTTTCAGCTGCGACCCGCAGGTCGGGAACGACCCGCAAATCTCCCCGCAGTAA

Upstream 100 bases:

>100_bases
CCGCCGTTACGCAACAGCTCGGATGGCTGTACCAAGCGGGCTACCGCCACCCGGGGTTCGTCTCCCTCTATGCCCCGCTT
TTCAAAGGACAGGACAAGTC

Downstream 100 bases:

>100_bases
GGCATGGCCGCACCTGTCTGGCGGCCGGCCGCTGGACAGGTGTTTGCGTTGCCGCCGATGGCGCGTCACAGGTGGATGAG
ATGTACCGACTGAGCGCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MTEQKEMHTELSVAYVDFGGNTGKGKYIYRFEPDLMLLEPLARNVTIKYAFDKAVPFNFRIRNLISSDSQNQISQIKYDG
DGRWVSFVNANDRATLIFFTVIVEDMQRETRFSCDPQVGNDPQISPQ

Sequences:

>Translated_127_residues
MTEQKEMHTELSVAYVDFGGNTGKGKYIYRFEPDLMLLEPLARNVTIKYAFDKAVPFNFRIRNLISSDSQNQISQIKYDG
DGRWVSFVNANDRATLIFFTVIVEDMQRETRFSCDPQVGNDPQISPQ
>Mature_126_residues
TEQKEMHTELSVAYVDFGGNTGKGKYIYRFEPDLMLLEPLARNVTIKYAFDKAVPFNFRIRNLISSDSQNQISQIKYDGD
GRWVSFVNANDRATLIFFTVIVEDMQRETRFSCDPQVGNDPQISPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14637; Mature: 14505

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQKEMHTELSVAYVDFGGNTGKGKYIYRFEPDLMLLEPLARNVTIKYAFDKAVPFNFR
CCCCHHCCCEEEEEEEEECCCCCCCCEEEEECCCEEEECCCCCCEEEEEEECCCCCCCEE
IRNLISSDSQNQISQIKYDGDGRWVSFVNANDRATLIFFTVIVEDMQRETRFSCDPQVGN
EHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHCCCCCCCCCC
DPQISPQ
CCCCCCC
>Mature Secondary Structure 
TEQKEMHTELSVAYVDFGGNTGKGKYIYRFEPDLMLLEPLARNVTIKYAFDKAVPFNFR
CCCHHCCCEEEEEEEEECCCCCCCCEEEEECCCEEEECCCCCCEEEEEEECCCCCCCEE
IRNLISSDSQNQISQIKYDGDGRWVSFVNANDRATLIFFTVIVEDMQRETRFSCDPQVGN
EHHHHCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHCCCCCCCCCC
DPQISPQ
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA