| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is opgB [H]
Identifier: 162017110
GI number: 162017110
Start: 484652
End: 486760
Strand: Reverse
Name: opgB [H]
Synonym: XC_0416
Alternate gene names: 162017110
Gene position: 486760-484652 (Counterclockwise)
Preceding gene: 66766759
Following gene: 66766756
Centisome position: 9.45
GC content: 64.63
Gene sequence:
>2109_bases ATGCATTGGATTTTGGCGCTGTCGTTGTTGCTGTTGCTCTTGTTGCTGGTGGCGTCGCCGCGTCTGGCGTGGCTGAAAGC CGGGCTGCTGTCGTTATTGTTGCTGTTGCTCAGCGCGTGGGGCCTGGTCGATCGGCTCAGTGGCGACGGCGTCAATGCCG CAACGCTCTACCACCTGCGCGCGGACATGGACGGCGCCGGCGTCAGCGATTTTTCCGGCTACATCGCCGTGTTTATCGGC ATGGTGCTGCTCTCGCTCAGCCCGCTGGTGCTGTTGCGGGTGCGCCGTTTCCGGCGCCCGCGTGGCGGCGGTGCGGTGTT CGGTGCGTTCGTGGTGATGCTGTTGGTGAGCGTGGCGGTCAGCCCGCTGTATCGCGATGGCAAGCGGCTGTACTACCAGT TGCGCCCGGTCGATTACGCCACCGTGGTGCCGGAATACCAGGTGCCGCAGCAGCCGCTGCAAAAGCGCAAGAACATCGTC TGGATCTATGGCGAAAGCCTGGAGCGCACCTACTTCGACGAAGCGACGTTTCCCGGCTTGATGCCCAATCTGCACCAGCT CGCCACCGAAGCAGTGGACGTGCGCAACCTCACCTCCACCGAAGGCAGCGGCTGGACCATTGCCGGCATGGTCGCTTCGA TGTGCGGCGTGCCGCTAACCACTGCCCCAGGCGATGAGAACAGCATGGGGCGCATGGGCCTGTTCCTGCCCGAGGCGCGT TGCCTGGGCGACTATCTCAAGGACCAGGGCTACCGCAATCACTACGTGGGCGGCGCCGATGCCAGCTTCGCCGGCAAGGG CAGCTTTCTGGCCAGCCACGGCTTCGACGTGGTGCACGACGTGAATTACTTCCACGACAAGGGGGTAGCGCCGAAGCATT TCTCCGCATGGGGCGTGCACGACGATGTCTTGCTCGATGATGCCTGGGATAGCTTCCAGACGCTCTCGCGCGCCGGCCAG CCGTTCATGCTCACCACCTTGACCATGGACACCCATCATCCTGCCGGCCACCTGCCGCTGGCGTGCAAGAACCAGCGTTA TGAGAGCCCGCTGGGTGACATCGGGCTGCTGCATGCCATCAAGTGCAGCGACCGGCTGATTGGTCGGCTGGTCACGCGCA TCCGCAACAGCCGCTACGGCCGCAACACCATCATCGTGATCGCCTCCGATCACCTGGCCATGCCCAACGATCTCAGCGAC GTGCTGGCCAAGCAAAAACGCGAAAACCTGTTGCTGTTCCTCGGCAAGGACATTCCGCCGCAACAGGTGGTCACGCGCGC CGGCAGCACCCTGGATTCGGGCGCCACGCTGCTGCAATTGCTGGAACCGGGCATGCGCACGCTGGGCTTCGGCCGCTCGC TGCTGGCCAATGACGCCCCGCCAAGTGCAAGCGTTGCCGCCAGTCGTGACAGCGGCAAAAACTATCCGCGCTATCTGGCC TATGCACGCACGTTATGGACCGGGCGCAGCACGCGCATGTTGCGTGTCAACGGCAATGGCGATGTGGTGGTGGGCGTGCA GCAGGTGCGCCCGCCGGTGCTACTGGAATACGACGACAACACCAACCTCAAGACGGTGTATCTGGAAAACACCTCGCGCC AGTTCGACCGCACCCACAGCGACGGCACGCTGGCCTATGTGGACCGTTGCACCGCCTTCGAAGACGGCTCGGCCGATGGC GACTGGTGTGCGCTGGTGGTGGATCGCAATCAGCACATGAAGCTGTACCGCGACCCCGACCTCACCCGCGGCATCGCCGT GGATGCGCCGCTGGATGTCACCCCGCAAGCGCCGCGCCCGCGCGTGCGTCAGCCGATCATGCTCACCCAGGCCGCGCGCA AGACCGAGGCCGGGCGCTACATGCTCGAGCTTTACGCCAAACGCCGCCCAACCCGCGCGTTCTGGGTCGAAGCCGTGTCG TCCGAACGCAAGGTGGTGCTGGCCCAGCAATGGGTGGTGCCCGACGCCTCCGGCCGCATCCGCATGCCGGTCGGCCTGGA GCATGCAGTGGAGGATCTGGAGATCCGCGCCTGGCTGGACTACACCGAAGAGGTGAGCGTGGACGACCTGGCATTGGTCA AGGACACCGCGGTTGCGGATCGCTCCTGA
Upstream 100 bases:
>100_bases ATAGTCCGTCTTCCCGGTGTCACATTTCGCGTGAAAGCCAAGGACACGGCGAGCAAAGCGTGCGGTGCGTGCTCGCCTCT TTCCCCCACGGACGCTGCAC
Downstream 100 bases:
>100_bases TCGGGTCTCTGCACGGCCAGCAGGCGGGCGTTGCTGTTGTTTGCTGCGGCATGTGGCACATGGATCTGCAGCTTCCGAGG CGGTGTCCTCACGGCGTGCG
Product: phosphoglycerol transferase I
Products: NA
Alternate protein names: Phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase [H]
Number of amino acids: Translated: 702; Mature: 702
Protein sequence:
>702_residues MHWILALSLLLLLLLLVASPRLAWLKAGLLSLLLLLLSAWGLVDRLSGDGVNAATLYHLRADMDGAGVSDFSGYIAVFIG MVLLSLSPLVLLRVRRFRRPRGGGAVFGAFVVMLLVSVAVSPLYRDGKRLYYQLRPVDYATVVPEYQVPQQPLQKRKNIV WIYGESLERTYFDEATFPGLMPNLHQLATEAVDVRNLTSTEGSGWTIAGMVASMCGVPLTTAPGDENSMGRMGLFLPEAR CLGDYLKDQGYRNHYVGGADASFAGKGSFLASHGFDVVHDVNYFHDKGVAPKHFSAWGVHDDVLLDDAWDSFQTLSRAGQ PFMLTTLTMDTHHPAGHLPLACKNQRYESPLGDIGLLHAIKCSDRLIGRLVTRIRNSRYGRNTIIVIASDHLAMPNDLSD VLAKQKRENLLLFLGKDIPPQQVVTRAGSTLDSGATLLQLLEPGMRTLGFGRSLLANDAPPSASVAASRDSGKNYPRYLA YARTLWTGRSTRMLRVNGNGDVVVGVQQVRPPVLLEYDDNTNLKTVYLENTSRQFDRTHSDGTLAYVDRCTAFEDGSADG DWCALVVDRNQHMKLYRDPDLTRGIAVDAPLDVTPQAPRPRVRQPIMLTQAARKTEAGRYMLELYAKRRPTRAFWVEAVS SERKVVLAQQWVVPDASGRIRMPVGLEHAVEDLEIRAWLDYTEEVSVDDLALVKDTAVADRS
Sequences:
>Translated_702_residues MHWILALSLLLLLLLLVASPRLAWLKAGLLSLLLLLLSAWGLVDRLSGDGVNAATLYHLRADMDGAGVSDFSGYIAVFIG MVLLSLSPLVLLRVRRFRRPRGGGAVFGAFVVMLLVSVAVSPLYRDGKRLYYQLRPVDYATVVPEYQVPQQPLQKRKNIV WIYGESLERTYFDEATFPGLMPNLHQLATEAVDVRNLTSTEGSGWTIAGMVASMCGVPLTTAPGDENSMGRMGLFLPEAR CLGDYLKDQGYRNHYVGGADASFAGKGSFLASHGFDVVHDVNYFHDKGVAPKHFSAWGVHDDVLLDDAWDSFQTLSRAGQ PFMLTTLTMDTHHPAGHLPLACKNQRYESPLGDIGLLHAIKCSDRLIGRLVTRIRNSRYGRNTIIVIASDHLAMPNDLSD VLAKQKRENLLLFLGKDIPPQQVVTRAGSTLDSGATLLQLLEPGMRTLGFGRSLLANDAPPSASVAASRDSGKNYPRYLA YARTLWTGRSTRMLRVNGNGDVVVGVQQVRPPVLLEYDDNTNLKTVYLENTSRQFDRTHSDGTLAYVDRCTAFEDGSADG DWCALVVDRNQHMKLYRDPDLTRGIAVDAPLDVTPQAPRPRVRQPIMLTQAARKTEAGRYMLELYAKRRPTRAFWVEAVS SERKVVLAQQWVVPDASGRIRMPVGLEHAVEDLEIRAWLDYTEEVSVDDLALVKDTAVADRS >Mature_702_residues MHWILALSLLLLLLLLVASPRLAWLKAGLLSLLLLLLSAWGLVDRLSGDGVNAATLYHLRADMDGAGVSDFSGYIAVFIG MVLLSLSPLVLLRVRRFRRPRGGGAVFGAFVVMLLVSVAVSPLYRDGKRLYYQLRPVDYATVVPEYQVPQQPLQKRKNIV WIYGESLERTYFDEATFPGLMPNLHQLATEAVDVRNLTSTEGSGWTIAGMVASMCGVPLTTAPGDENSMGRMGLFLPEAR CLGDYLKDQGYRNHYVGGADASFAGKGSFLASHGFDVVHDVNYFHDKGVAPKHFSAWGVHDDVLLDDAWDSFQTLSRAGQ PFMLTTLTMDTHHPAGHLPLACKNQRYESPLGDIGLLHAIKCSDRLIGRLVTRIRNSRYGRNTIIVIASDHLAMPNDLSD VLAKQKRENLLLFLGKDIPPQQVVTRAGSTLDSGATLLQLLEPGMRTLGFGRSLLANDAPPSASVAASRDSGKNYPRYLA YARTLWTGRSTRMLRVNGNGDVVVGVQQVRPPVLLEYDDNTNLKTVYLENTSRQFDRTHSDGTLAYVDRCTAFEDGSADG DWCALVVDRNQHMKLYRDPDLTRGIAVDAPLDVTPQAPRPRVRQPIMLTQAARKTEAGRYMLELYAKRRPTRAFWVEAVS SERKVVLAQQWVVPDASGRIRMPVGLEHAVEDLEIRAWLDYTEEVSVDDLALVKDTAVADRS
Specific function: Transfers a phosphoglycerol residue from phosphatidylglycerol to the membrane-bound nascent glucan backbones [H]
COG id: COG1368
COG function: function code M; Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the opgB family [H]
Homologues:
Organism=Escherichia coli, GI87082433, Length=482, Percent_Identity=36.9294605809129, Blast_Score=278, Evalue=7e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR020881 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: =2.7.8.20 [H]
Molecular weight: Translated: 77683; Mature: 77683
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHWILALSLLLLLLLLVASPRLAWLKAGLLSLLLLLLSAWGLVDRLSGDGVNAATLYHLR CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE ADMDGAGVSDFSGYIAVFIGMVLLSLSPLVLLRVRRFRRPRGGGAVFGAFVVMLLVSVAV ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH SPLYRDGKRLYYQLRPVDYATVVPEYQVPQQPLQKRKNIVWIYGESLERTYFDEATFPGL HHHHHCCCEEEEEECCCCCEEECCCCCCCHHHHHHHCCEEEEECCCCCHHHCCCCCCCCC MPNLHQLATEAVDVRNLTSTEGSGWTIAGMVASMCGVPLTTAPGDENSMGRMGLFLPEAR CCHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHH CLGDYLKDQGYRNHYVGGADASFAGKGSFLASHGFDVVHDVNYFHDKGVAPKHFSAWGVH HHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEECCHHHHCCCCCCCCCCCCCCC DDVLLDDAWDSFQTLSRAGQPFMLTTLTMDTHHPAGHLPLACKNQRYESPLGDIGLLHAI CCEEECCCHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHH KCSDRLIGRLVTRIRNSRYGRNTIIVIASDHLAMPNDLSDVLAKQKRENLLLFLGKDIPP HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCEEEEECCCCCH QQVVTRAGSTLDSGATLLQLLEPGMRTLGFGRSLLANDAPPSASVAASRDSGKNYPRYLA HHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCEEECCCCCCCCHHHHH YARTLWTGRSTRMLRVNGNGDVVVGVQQVRPPVLLEYDDNTNLKTVYLENTSRQFDRTHS HHHHHHCCCCEEEEEECCCCCEEEEHHHCCCCEEEEECCCCCEEEEEECCCCHHHHCCCC DGTLAYVDRCTAFEDGSADGDWCALVVDRNQHMKLYRDPDLTRGIAVDAPLDVTPQAPRP CCCEEEEEHHCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCEEECCCCCCCCCCCCC RVRQPIMLTQAARKTEAGRYMLELYAKRRPTRAFWVEAVSSERKVVLAQQWVVPDASGRI CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEEEECCCCCCCE RMPVGLEHAVEDLEIRAWLDYTEEVSVDDLALVKDTAVADRS ECCCCHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MHWILALSLLLLLLLLVASPRLAWLKAGLLSLLLLLLSAWGLVDRLSGDGVNAATLYHLR CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE ADMDGAGVSDFSGYIAVFIGMVLLSLSPLVLLRVRRFRRPRGGGAVFGAFVVMLLVSVAV ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH SPLYRDGKRLYYQLRPVDYATVVPEYQVPQQPLQKRKNIVWIYGESLERTYFDEATFPGL HHHHHCCCEEEEEECCCCCEEECCCCCCCHHHHHHHCCEEEEECCCCCHHHCCCCCCCCC MPNLHQLATEAVDVRNLTSTEGSGWTIAGMVASMCGVPLTTAPGDENSMGRMGLFLPEAR CCHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHH CLGDYLKDQGYRNHYVGGADASFAGKGSFLASHGFDVVHDVNYFHDKGVAPKHFSAWGVH HHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEECCHHHHCCCCCCCCCCCCCCC DDVLLDDAWDSFQTLSRAGQPFMLTTLTMDTHHPAGHLPLACKNQRYESPLGDIGLLHAI CCEEECCCHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHH KCSDRLIGRLVTRIRNSRYGRNTIIVIASDHLAMPNDLSDVLAKQKRENLLLFLGKDIPP HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCEEEEECCCCCH QQVVTRAGSTLDSGATLLQLLEPGMRTLGFGRSLLANDAPPSASVAASRDSGKNYPRYLA HHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCEEECCCCCCCCHHHHH YARTLWTGRSTRMLRVNGNGDVVVGVQQVRPPVLLEYDDNTNLKTVYLENTSRQFDRTHS HHHHHHCCCCEEEEEECCCCCEEEEHHHCCCCEEEEECCCCCEEEEEECCCCHHHHCCCC DGTLAYVDRCTAFEDGSADGDWCALVVDRNQHMKLYRDPDLTRGIAVDAPLDVTPQAPRP CCCEEEEEHHCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCEEECCCCCCCCCCCCC RVRQPIMLTQAARKTEAGRYMLELYAKRRPTRAFWVEAVSSERKVVLAQQWVVPDASGRI CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEEEECCCCCCCE RMPVGLEHAVEDLEIRAWLDYTEEVSVDDLALVKDTAVADRS ECCCCHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]