Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
---|---|
Accession | NC_007005 |
Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is 66045954
Identifier: 66045954
GI number: 66045954
Start: 3300251
End: 3301435
Strand: Reverse
Name: 66045954
Synonym: Psyr_2718
Alternate gene names: NA
Gene position: 3301435-3300251 (Counterclockwise)
Preceding gene: 66045956
Following gene: 66045953
Centisome position: 54.18
GC content: 61.52
Gene sequence:
>1185_bases ATGCATCGAACGAAAATTTCCGCAGCACTGGCCATGATTTCCGCCGCCACACTCGCTACTTCGCTGGCCTACGGCGCGAC CGCCATTCCATTGCCTGCCAGTGCGCCTGCCGACAAACCGATCGGCAAGCTCGAACAGGTGCATGCCTTTTATGACGCGA TGCCTACCGGCGTGACGGTGACTGAAACCGGACGGATCTTCGTCAATTTCCCGCGTTGGGGTGACAAGGTGCCGTTTACT GTGGGCGAGATTCGTGACGGCAAAGTGGTTGCCTACCCCGATCTGGCGGTCAACAAGGAGAACCCCAAAGACCCTGGCGA CGGGCTGATCAGCGTGCAGAGTGTGGTCGCCGACGGCAAGGGTCGTGTCTGGCTTCTGGACACGGCCGCACCGGGCTTTG CGTCTCCGCGTCGAGGCGGCGCCAAACTGGTTGCGGTGGACCTGGCCACCAACCGGATCGTCAAGCGCCTGGTGTTTCCG GATAACGTCATCTTGCCCGGCACTTATGTCAACGACATGCGCTTTGACTTGCGCAAGGGAGCGGAGGGGACGGTCTATGT AACGGACTCATCCTTGAGCGGGCCGGGCGCGATCATTGTCATGGACATTGCCAGCGGCCACGCCGTGCGGCGCTTGAACG GGGCGCAGGCTACGTCTGTCGATCCGGCTTTCGTACCCGTCGTCGAAGGTGTTGCTGTGCTGGGCGATGGCCCGAACGGA ACGCGCAAACCGGTCGGCGTCGCCTCGGACGGCATTGCGTTGTCGGCAGACGGCAAGACACTGTATTTCTCGCCGTTGTC CAGCCGCCATCTGTATGCCGTGGCCACCGAGCTGTTGAACGACAGCAAGGTCAGCGAGCAGCAGTTGGCAGCGGCGGTGC AGGACCTCGGGGAAAAAGGCGCTTCGGATGGCCTGGAGGCTGATGCCAAAGGCGCGGTATACGCAGGCGACTACGAGCAT AATTCGATTCGCAAACGCCTGCCGGATGGCACCTGGCAAACGGTGGCACACGATCCGCGCATGCTGTGGCCTGACACCTT GTCGATCGGCCCGGATGGCTACCTGTACTTCATCGTCAACCAGCTGCACCGCCAGGCCAACTTCAACGCCGGCCACGACA AGCGGGAAAAACCCTACAGCCTGCTGCGTTTGAAAATAGACGCTGCGCCCGCACCTACCCATTGA
Upstream 100 bases:
>100_bases CATTGCTTCCCTTGCGCGGCAAGAGTGACGAGCGTCATCACGGCTCTCGCGCAAAAAGCCCCAATGCTGATGGGCAGTTG GACCCTCAGGAGAACACACC
Downstream 100 bases:
>100_bases TCGAATCGAATACCGGAGCATCGATAATGAACGCACCTGCAAAGCCATTGGCCTTGATGGCAGTCCTGAAAGCCAGTGCC GGCAAAGAGTCGGCCCTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Gluconolactonase; Royal Jelly-Like Protein; Glyoxalase/Bleomycin Resistance Protein/Dioxygenase; Royal Jelly-Like Exported Protein; SMP-30/Gluconolactonase/LRE Family Protein; Yellow-Related Protein
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MHRTKISAALAMISAATLATSLAYGATAIPLPASAPADKPIGKLEQVHAFYDAMPTGVTVTETGRIFVNFPRWGDKVPFT VGEIRDGKVVAYPDLAVNKENPKDPGDGLISVQSVVADGKGRVWLLDTAAPGFASPRRGGAKLVAVDLATNRIVKRLVFP DNVILPGTYVNDMRFDLRKGAEGTVYVTDSSLSGPGAIIVMDIASGHAVRRLNGAQATSVDPAFVPVVEGVAVLGDGPNG TRKPVGVASDGIALSADGKTLYFSPLSSRHLYAVATELLNDSKVSEQQLAAAVQDLGEKGASDGLEADAKGAVYAGDYEH NSIRKRLPDGTWQTVAHDPRMLWPDTLSIGPDGYLYFIVNQLHRQANFNAGHDKREKPYSLLRLKIDAAPAPTH
Sequences:
>Translated_394_residues MHRTKISAALAMISAATLATSLAYGATAIPLPASAPADKPIGKLEQVHAFYDAMPTGVTVTETGRIFVNFPRWGDKVPFT VGEIRDGKVVAYPDLAVNKENPKDPGDGLISVQSVVADGKGRVWLLDTAAPGFASPRRGGAKLVAVDLATNRIVKRLVFP DNVILPGTYVNDMRFDLRKGAEGTVYVTDSSLSGPGAIIVMDIASGHAVRRLNGAQATSVDPAFVPVVEGVAVLGDGPNG TRKPVGVASDGIALSADGKTLYFSPLSSRHLYAVATELLNDSKVSEQQLAAAVQDLGEKGASDGLEADAKGAVYAGDYEH NSIRKRLPDGTWQTVAHDPRMLWPDTLSIGPDGYLYFIVNQLHRQANFNAGHDKREKPYSLLRLKIDAAPAPTH >Mature_394_residues MHRTKISAALAMISAATLATSLAYGATAIPLPASAPADKPIGKLEQVHAFYDAMPTGVTVTETGRIFVNFPRWGDKVPFT VGEIRDGKVVAYPDLAVNKENPKDPGDGLISVQSVVADGKGRVWLLDTAAPGFASPRRGGAKLVAVDLATNRIVKRLVFP DNVILPGTYVNDMRFDLRKGAEGTVYVTDSSLSGPGAIIVMDIASGHAVRRLNGAQATSVDPAFVPVVEGVAVLGDGPNG TRKPVGVASDGIALSADGKTLYFSPLSSRHLYAVATELLNDSKVSEQQLAAAVQDLGEKGASDGLEADAKGAVYAGDYEH NSIRKRLPDGTWQTVAHDPRMLWPDTLSIGPDGYLYFIVNQLHRQANFNAGHDKREKPYSLLRLKIDAAPAPTH
Specific function: Unknown
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41797; Mature: 41797
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRTKISAALAMISAATLATSLAYGATAIPLPASAPADKPIGKLEQVHAFYDAMPTGVTV CCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEE TETGRIFVNFPRWGDKVPFTVGEIRDGKVVAYPDLAVNKENPKDPGDGLISVQSVVADGK EECCEEEEECCCCCCCCCEEECCCCCCEEEECCCEEECCCCCCCCCCCEEEEEHHHCCCC GRVWLLDTAAPGFASPRRGGAKLVAVDLATNRIVKRLVFPDNVILPGTYVNDMRFDLRKG CCEEEEECCCCCCCCCCCCCEEEEEEEHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHCC AEGTVYVTDSSLSGPGAIIVMDIASGHAVRRLNGAQATSVDPAFVPVVEGVAVLGDGPNG CCCEEEEECCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCHHHHHHCCEEEEECCCCC TRKPVGVASDGIALSADGKTLYFSPLSSRHLYAVATELLNDSKVSEQQLAAAVQDLGEKG CCCCCCCCCCCEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC ASDGLEADAKGAVYAGDYEHNSIRKRLPDGTWQTVAHDPRMLWPDTLSIGPDGYLYFIVN CCCCCCCCCCCCEEECCCCCCHHHHHCCCCCCHHHCCCCCEECCCCCCCCCCCEEEEEEH QLHRQANFNAGHDKREKPYSLLRLKIDAAPAPTH HHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCC >Mature Secondary Structure MHRTKISAALAMISAATLATSLAYGATAIPLPASAPADKPIGKLEQVHAFYDAMPTGVTV CCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEE TETGRIFVNFPRWGDKVPFTVGEIRDGKVVAYPDLAVNKENPKDPGDGLISVQSVVADGK EECCEEEEECCCCCCCCCEEECCCCCCEEEECCCEEECCCCCCCCCCCEEEEEHHHCCCC GRVWLLDTAAPGFASPRRGGAKLVAVDLATNRIVKRLVFPDNVILPGTYVNDMRFDLRKG CCEEEEECCCCCCCCCCCCCEEEEEEEHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHCC AEGTVYVTDSSLSGPGAIIVMDIASGHAVRRLNGAQATSVDPAFVPVVEGVAVLGDGPNG CCCEEEEECCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCHHHHHHCCEEEEECCCCC TRKPVGVASDGIALSADGKTLYFSPLSSRHLYAVATELLNDSKVSEQQLAAAVQDLGEKG CCCCCCCCCCCEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC ASDGLEADAKGAVYAGDYEHNSIRKRLPDGTWQTVAHDPRMLWPDTLSIGPDGYLYFIVN CCCCCCCCCCCCEEECCCCCCHHHHHCCCCCCHHHCCCCCEECCCCCCCCCCCEEEEEEH QLHRQANFNAGHDKREKPYSLLRLKIDAAPAPTH HHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA