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The map label for this gene is ybgK [H]

Identifier: 66045956

GI number: 66045956

Start: 3302344

End: 3303318

Strand: Reverse

Name: ybgK [H]

Synonym: Psyr_2720

Alternate gene names: 66045956

Gene position: 3303318-3302344 (Counterclockwise)

Preceding gene: 66045957

Following gene: 66045954

Centisome position: 54.21

GC content: 63.59

Gene sequence:

>975_bases
ATGATCAAGGTGCTCAAACCCGGTCTGGCCACCTCGGTTCAGGACCTCGGTCGCGAGGGCTATTATCACCTGGGCATTCC
GCCCTCCGGTGCGCTCGACCAGTACGCCCTCAGCGCCGCCAATCAGCTGGTCGGGAATCCACCCGGCGCTGCCGGGCTTG
AATGCACGCTGCTGGGACCGGAACTGGAGTTTCAGTGCGATACGTTGGCTGCGGTCTGCGGCGCACACATGGCGGCGCGC
CTCGACGGTGTGGAAATGCACCACGACACCGCCTTTGCGGTGAAGGCCGGGCAAGTGCTGCGTTTCGACTTCCCCAAGGA
CGGTGCGCGCACCTATCTGGCCGTCGCCGGCGGCATTGATGTGCCGCTGGTGCTGGGCAGCCGTTCGACTTACACGTTGG
GTGCACTTGGCGGTTTTCAGGGTCGTAGACTGGCCGCTGATGACCAGTTGCCGATAGGCACGCCAAGCGGCAAGGGACGT
GCCGGGGCCAGCCTGCCGATGGCCTTGCGCCAGTCTCTGGGTGGTGAGGTGTATCTGCGGGTCGTGCCGGGCCTGTATTA
CGAGCGCCTGACCGAATTTGCTGCCACCAGTTTTTTCTCCGAGCCCTGGAGCGTAGGGTCGGAAGCCGACCGCATCGGTT
ATCGCTTCAAGGGGGGCAGGGCGCTGACCTTCCAGCCCAGGGAGCAGCCCTTCGGCGCCGGTTCCGATCCATCCAATATC
GTCGACAGCTGCTACCCGATCGGTTCGATTCAGGTGCCTGCCGGGCTGGAACCGATTGTGTTGCACCGTGATGCGGTGTC
GGGCGGGGGCTACGCGATGATCGGCACGGTGATCAGCGCGGACCTGGATCTGATCGGTCAGATGCAACCCAATCAGACCG
CCCGATTCGTGGCCGTAACGCTGGAGGAGGCGCTGGAGGCGCGCAAGTCATACAAGAAGAAGCTGGCGTGCCTGAGCAAA
CTGTTTCCTTCCTGA

Upstream 100 bases:

>100_bases
CCGGGCGCTTCGACCTGCTCATCCGCCCGGTCGAGTTTTCCCTGGATGCCTTTCTGGCCGATCCGGTGGGCTATCCCAAG
TCGTTGCAGGAGGTGCTGGC

Downstream 100 bases:

>100_bases
GGCTGTCAGTCGGCCTGCCCGGACTCCAGTTGTGCCCGCATCTTCGCGCGGCACACCTCGAGTATTTCGTCCGCCAGCGG
CGAGTCATTCGGGCAGCTGC

Product: Urea amidolyase-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MIKVLKPGLATSVQDLGREGYYHLGIPPSGALDQYALSAANQLVGNPPGAAGLECTLLGPELEFQCDTLAAVCGAHMAAR
LDGVEMHHDTAFAVKAGQVLRFDFPKDGARTYLAVAGGIDVPLVLGSRSTYTLGALGGFQGRRLAADDQLPIGTPSGKGR
AGASLPMALRQSLGGEVYLRVVPGLYYERLTEFAATSFFSEPWSVGSEADRIGYRFKGGRALTFQPREQPFGAGSDPSNI
VDSCYPIGSIQVPAGLEPIVLHRDAVSGGGYAMIGTVISADLDLIGQMQPNQTARFVAVTLEEALEARKSYKKKLACLSK
LFPS

Sequences:

>Translated_324_residues
MIKVLKPGLATSVQDLGREGYYHLGIPPSGALDQYALSAANQLVGNPPGAAGLECTLLGPELEFQCDTLAAVCGAHMAAR
LDGVEMHHDTAFAVKAGQVLRFDFPKDGARTYLAVAGGIDVPLVLGSRSTYTLGALGGFQGRRLAADDQLPIGTPSGKGR
AGASLPMALRQSLGGEVYLRVVPGLYYERLTEFAATSFFSEPWSVGSEADRIGYRFKGGRALTFQPREQPFGAGSDPSNI
VDSCYPIGSIQVPAGLEPIVLHRDAVSGGGYAMIGTVISADLDLIGQMQPNQTARFVAVTLEEALEARKSYKKKLACLSK
LFPS
>Mature_324_residues
MIKVLKPGLATSVQDLGREGYYHLGIPPSGALDQYALSAANQLVGNPPGAAGLECTLLGPELEFQCDTLAAVCGAHMAAR
LDGVEMHHDTAFAVKAGQVLRFDFPKDGARTYLAVAGGIDVPLVLGSRSTYTLGALGGFQGRRLAADDQLPIGTPSGKGR
AGASLPMALRQSLGGEVYLRVVPGLYYERLTEFAATSFFSEPWSVGSEADRIGYRFKGGRALTFQPREQPFGAGSDPSNI
VDSCYPIGSIQVPAGLEPIVLHRDAVSGGGYAMIGTVISADLDLIGQMQPNQTARFVAVTLEEALEARKSYKKKLACLSK
LFPS

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=319, Percent_Identity=38.2445141065831, Blast_Score=191, Evalue=4e-50,
Organism=Saccharomyces cerevisiae, GI6319685, Length=323, Percent_Identity=34.6749226006192, Blast_Score=169, Evalue=8e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 34207; Mature: 34207

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKVLKPGLATSVQDLGREGYYHLGIPPSGALDQYALSAANQLVGNPPGAAGLECTLLGP
CCEEECCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECC
ELEFQCDTLAAVCGAHMAARLDGVEMHHDTAFAVKAGQVLRFDFPKDGARTYLAVAGGID
CCCCCHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCEEEEECCCCCCEEEEEEECCCC
VPLVLGSRSTYTLGALGGFQGRRLAADDQLPIGTPSGKGRAGASLPMALRQSLGGEVYLR
EEEEECCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEE
VVPGLYYERLTEFAATSFFSEPWSVGSEADRIGYRFKGGRALTFQPREQPFGAGSDPSNI
ECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEECCCEEEEECCCCCCCCCCCCHHHH
VDSCYPIGSIQVPAGLEPIVLHRDAVSGGGYAMIGTVISADLDLIGQMQPNQTARFVAVT
HHHCCCCCCEECCCCCCCEEEEECCCCCCCEEEEHHHHHHCHHHHCCCCCCCCCEEEEEE
LEEALEARKSYKKKLACLSKLFPS
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKVLKPGLATSVQDLGREGYYHLGIPPSGALDQYALSAANQLVGNPPGAAGLECTLLGP
CCEEECCCHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECC
ELEFQCDTLAAVCGAHMAARLDGVEMHHDTAFAVKAGQVLRFDFPKDGARTYLAVAGGID
CCCCCHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCEEEEECCCCCCEEEEEEECCCC
VPLVLGSRSTYTLGALGGFQGRRLAADDQLPIGTPSGKGRAGASLPMALRQSLGGEVYLR
EEEEECCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEE
VVPGLYYERLTEFAATSFFSEPWSVGSEADRIGYRFKGGRALTFQPREQPFGAGSDPSNI
ECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEECCCEEEEECCCCCCCCCCCCHHHH
VDSCYPIGSIQVPAGLEPIVLHRDAVSGGGYAMIGTVISADLDLIGQMQPNQTARFVAVT
HHHCCCCCCEECCCCCCCEEEEECCCCCCCEEEEHHHHHHCHHHHCCCCCCCCCEEEEEE
LEEALEARKSYKKKLACLSKLFPS
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]