| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045511
Identifier: 66045511
GI number: 66045511
Start: 2636708
End: 2637874
Strand: Direct
Name: 66045511
Synonym: Psyr_2271
Alternate gene names: NA
Gene position: 2636708-2637874 (Clockwise)
Preceding gene: 66045510
Following gene: 66045513
Centisome position: 43.27
GC content: 59.64
Gene sequence:
>1167_bases ATGACAACAGCTGTTCACCCCCCTCGAGCGCCGGCATCCCGGCTTCGCTCAATCGATGCTCTGCGCGGGCTGATTATTCT TTTCATGTTGCTGGACCATGTGCGGGAAACCTTCTTTCTGCACCGTCAGGTGCTGGACCCTATGGACATCACGGCCACCG AGCCTGAGCTGTTCTTCAGCCGCACGCTGGCGCATTTGTGTGCGCCATTGTTCGTGCTGCTTACCGGGCTTTCCGCGTAC CTCTACGGCGAGAAATACCAGGGCAGAAGCGACGTGTCGGCGTTCCTGCTCAAGCGCGGGCTGTTTCTGATCGCGCTGGA ATTCACCCTGGTGAGCTTCGCCTGGACCTTCGAGTTCCCGCCAACCGTCATCTACCTGCAAGTGATCTGGGCCATCGGCC TGAGCATGGTGGCGCTGTCGCTAATGGTGTTCCTGCCGCGCTGGGCGCTGGTGGTCATCGGTGTGGTGATCATTGCCGGA CACAACCTGCTGGACACGCTGCATTTCGGCGTCGAGTCGGCCATGCACATCCCGTGGGCGATTCTGCATGATCGCGGCTG GATCGAGGTGTCGGACAACCTGCGTTTCCGTACCTCATACCCGCTTTTGCCGTGGATCGGCATCATTGCGCTGGGCTACG CTGCCGGGCCATGGTTTGTCTCCGGTTTCGATGCCGCAACGCGTCAGGCGAAACTCTGGACCTGGGGCCTGGGTGCGCTG GCGGGTTTCGTGATTCTGCGCATGATCAACGGCTACGGCGAAAAGCCGTGGAGTGTTGGCGAGACCGGCCTGCAAACCGT CATGAGCTTTTTCAACATCACCAAATACCCGCCATCGTTGCTGTTCATCAGCCTGACGCTGGGGATCGGCATGCTGATCC TGATCGGGTTCGAGCGCAGTCAGGAGAAAAGCTGGTTGCGGCCGTTGGTAGTACTCGGTTCAGCACCGATGTTTTTCTAC CTGCTGCACCTGTACGTGCTGAAGATTCTGTACCTGATCGCTCTGGCCATCTGGGGCGCGAATCAGGGCAAATACTTCGG CTTTGACCACATGTGGGGCGTCTGGCTGACCTCGGTGGTACTGGCTGTTCTGCTGTTCCCGGCGGTGCGCTGGTTCGCCG CGCTCAAGGCCCGGCGTCGGGATATCAGCTGGCTGAAGTACTTCTAG
Upstream 100 bases:
>100_bases AAGCTAGAGGCTAAAAGCTTGAAGCTTGAAGCTTTCCACTTGCAGCTTGCAGCTTGCAGCTACAAGCCATTAGCCCCCCA TCACGGACCTTGGACTTTTC
Downstream 100 bases:
>100_bases TCCCGGCAACAGCGGTGCGCCTGCTGGCGTACCGCTTCTCGCCTGGCGTCAGTCTCCGTGCGCCCCGTAATTCATGATCG ACAGCAGTTTGATCGGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MTTAVHPPRAPASRLRSIDALRGLIILFMLLDHVRETFFLHRQVLDPMDITATEPELFFSRTLAHLCAPLFVLLTGLSAY LYGEKYQGRSDVSAFLLKRGLFLIALEFTLVSFAWTFEFPPTVIYLQVIWAIGLSMVALSLMVFLPRWALVVIGVVIIAG HNLLDTLHFGVESAMHIPWAILHDRGWIEVSDNLRFRTSYPLLPWIGIIALGYAAGPWFVSGFDAATRQAKLWTWGLGAL AGFVILRMINGYGEKPWSVGETGLQTVMSFFNITKYPPSLLFISLTLGIGMLILIGFERSQEKSWLRPLVVLGSAPMFFY LLHLYVLKILYLIALAIWGANQGKYFGFDHMWGVWLTSVVLAVLLFPAVRWFAALKARRRDISWLKYF
Sequences:
>Translated_388_residues MTTAVHPPRAPASRLRSIDALRGLIILFMLLDHVRETFFLHRQVLDPMDITATEPELFFSRTLAHLCAPLFVLLTGLSAY LYGEKYQGRSDVSAFLLKRGLFLIALEFTLVSFAWTFEFPPTVIYLQVIWAIGLSMVALSLMVFLPRWALVVIGVVIIAG HNLLDTLHFGVESAMHIPWAILHDRGWIEVSDNLRFRTSYPLLPWIGIIALGYAAGPWFVSGFDAATRQAKLWTWGLGAL AGFVILRMINGYGEKPWSVGETGLQTVMSFFNITKYPPSLLFISLTLGIGMLILIGFERSQEKSWLRPLVVLGSAPMFFY LLHLYVLKILYLIALAIWGANQGKYFGFDHMWGVWLTSVVLAVLLFPAVRWFAALKARRRDISWLKYF >Mature_387_residues TTAVHPPRAPASRLRSIDALRGLIILFMLLDHVRETFFLHRQVLDPMDITATEPELFFSRTLAHLCAPLFVLLTGLSAYL YGEKYQGRSDVSAFLLKRGLFLIALEFTLVSFAWTFEFPPTVIYLQVIWAIGLSMVALSLMVFLPRWALVVIGVVIIAGH NLLDTLHFGVESAMHIPWAILHDRGWIEVSDNLRFRTSYPLLPWIGIIALGYAAGPWFVSGFDAATRQAKLWTWGLGALA GFVILRMINGYGEKPWSVGETGLQTVMSFFNITKYPPSLLFISLTLGIGMLILIGFERSQEKSWLRPLVVLGSAPMFFYL LHLYVLKILYLIALAIWGANQGKYFGFDHMWGVWLTSVVLAVLLFPAVRWFAALKARRRDISWLKYF
Specific function: Unknown
COG id: COG3503
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43976; Mature: 43845
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAVHPPRAPASRLRSIDALRGLIILFMLLDHVRETFFLHRQVLDPMDITATEPELFFS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH RTLAHLCAPLFVLLTGLSAYLYGEKYQGRSDVSAFLLKRGLFLIALEFTLVSFAWTFEFP HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHEEECCC PTVIYLQVIWAIGLSMVALSLMVFLPRWALVVIGVVIIAGHNLLDTLHFGVESAMHIPWA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEE ILHDRGWIEVSDNLRFRTSYPLLPWIGIIALGYAAGPWFVSGFDAATRQAKLWTWGLGAL EEECCCCEEECCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHH AGFVILRMINGYGEKPWSVGETGLQTVMSFFNITKYPPSLLFISLTLGIGMLILIGFERS HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC QEKSWLRPLVVLGSAPMFFYLLHLYVLKILYLIALAIWGANQGKYFGFDHMWGVWLTSVV CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH LAVLLFPAVRWFAALKARRRDISWLKYF HHHHHHHHHHHHHHHHHHHCCCHHHHCC >Mature Secondary Structure TTAVHPPRAPASRLRSIDALRGLIILFMLLDHVRETFFLHRQVLDPMDITATEPELFFS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH RTLAHLCAPLFVLLTGLSAYLYGEKYQGRSDVSAFLLKRGLFLIALEFTLVSFAWTFEFP HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHEEECCC PTVIYLQVIWAIGLSMVALSLMVFLPRWALVVIGVVIIAGHNLLDTLHFGVESAMHIPWA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEE ILHDRGWIEVSDNLRFRTSYPLLPWIGIIALGYAAGPWFVSGFDAATRQAKLWTWGLGAL EEECCCCEEECCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHH AGFVILRMINGYGEKPWSVGETGLQTVMSFFNITKYPPSLLFISLTLGIGMLILIGFERS HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC QEKSWLRPLVVLGSAPMFFYLLHLYVLKILYLIALAIWGANQGKYFGFDHMWGVWLTSVV CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH LAVLLFPAVRWFAALKARRRDISWLKYF HHHHHHHHHHHHHHHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA