| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is glnT [H]
Identifier: 66045513
GI number: 66045513
Start: 2638817
End: 2640151
Strand: Direct
Name: glnT [H]
Synonym: Psyr_2273
Alternate gene names: 66045513
Gene position: 2638817-2640151 (Clockwise)
Preceding gene: 66045511
Following gene: 66045514
Centisome position: 43.3
GC content: 60.15
Gene sequence:
>1335_bases ATGTTGCCACCCGAAACACAGCGTCTGATCGAACAGCACGGCATCAAGTACGTACTGGCTCAGTTCGTCGACATTCATGG TTCGGCCAAGACCAAATCGGTTCCTGTGACAGGTCTGGAAATGGTTGCAGAGGACGGTGCCGGCTTTGCCGGTTTCGCGA TCTGCGGGATGGGCATGGAGCCTCATGGGCCGGACTTCATGGCCAGGGGTGATCTGTCGTCGCTGACCCCGGTGCCATGG CAGCCGGGCTATGGACGGGTGGTGTGCATCGGCCATGTGGATGGCAAACCCTGGCCCTATGACAGCCGCTATGTGCTGCA GCAGCAGGTCGAACGCCTCAGTCAGCGTGGCTGGAGCCTCAATACCGGCCTGGAGCCCGAGTTCAGCCTGTTCAAGCGCG ATGTCACCGGCAGCCTGCAGATGGTCGATGCCAGCGATAACCTCGACAAGCCTTGCTACGACTACAAGGGGCTGTCGCGC TCTCGCGAGTTTCTCGAGCGCCTGACCGAGGCATTGCAGCCGGTGGGTTTCGACATTTATCAGATCGATCATGAAGACGC CAACGGCCAGTTCGAGATCAATTACACCTACAGCGAGGCCATGGAATCGGCTGACCGTTTCACCTTCTTCCGCATGGCCG CCGGTGAGATCGCCAATGACATGGGCATGATCTGCTCGTTCATGCCCAAGCCCGATCCCAAACGGGCCGGCAATGGCATG CACTTTCACTTGTCGATCGCCAGTGCCAGTAACAAGAACCTGTTCCACGATGCCAGCGATCCGAGCGGCATGGGGTTGTC GACGCTGGCCTATCACTTCGCTGCGGGCCTGCTGGCTCACGGGCCTGCGCTGTGCGCCTTTGCGGCACCCACGGTCAACT CCTACAAACGCCTGGTGGTCGGCAACTCACTGTCGGGCGCCACCTGGGCCCCGGCGTTTATTGCCTTCGGCGCCAACAAC CGCTCGGCGATGGTGCGCGTGCCCTATGGCCGCCTGGAGTTTCGTCTGCCCGACGCCGGTTGCAATCCGTATCTGGTCAG CGCCGCAATCATTGCCGCAGGCCTGGACGGTATCGACCGGCAACTGGAGATCGATCACGTCTGCAACGAGAACCTCTACA AATTGAGCCTCGAAGAGATCGCCGCACGGGGCATCAAGACCCTGCCGCAGTCGCTCAACGAAGCCTGCGACGCGCTGCAA GCCGACCCGTTGTTTGGCGAAGTGCTGGGCAGCGAGATTGTCGATGAATTCATCCGCCTCAAGCGCATGGAGTGGGTGGA ATACAGCCGCCACGTGAGCGATTGGGAAGTGAAGCGCTATATCGAATTTTTCTAG
Upstream 100 bases:
>100_bases CCTAAAGGGAAAGTAACTTTCCTGTTCGGAATATATCCCGAAAGGCAGTGAACAGCGGCCCTTCCCTGAAACGTTTTGCT TTTGCCAGGAGACACGTCCC
Downstream 100 bases:
>100_bases CGGCAAGCTTCAGAGAGCAGCTGCAAGTTTCAAGCGGCAAGCTGCAAGAGGAAGCTGGATTGCGGCGTATTTGATTTCTC TGTCTATGCGGTTGGTTTTA
Product: glutamate--ammonia ligase
Products: NA
Alternate protein names: Glutamate--ammonia ligase; Glutamine synthetase III; GSIII [H]
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MLPPETQRLIEQHGIKYVLAQFVDIHGSAKTKSVPVTGLEMVAEDGAGFAGFAICGMGMEPHGPDFMARGDLSSLTPVPW QPGYGRVVCIGHVDGKPWPYDSRYVLQQQVERLSQRGWSLNTGLEPEFSLFKRDVTGSLQMVDASDNLDKPCYDYKGLSR SREFLERLTEALQPVGFDIYQIDHEDANGQFEINYTYSEAMESADRFTFFRMAAGEIANDMGMICSFMPKPDPKRAGNGM HFHLSIASASNKNLFHDASDPSGMGLSTLAYHFAAGLLAHGPALCAFAAPTVNSYKRLVVGNSLSGATWAPAFIAFGANN RSAMVRVPYGRLEFRLPDAGCNPYLVSAAIIAAGLDGIDRQLEIDHVCNENLYKLSLEEIAARGIKTLPQSLNEACDALQ ADPLFGEVLGSEIVDEFIRLKRMEWVEYSRHVSDWEVKRYIEFF
Sequences:
>Translated_444_residues MLPPETQRLIEQHGIKYVLAQFVDIHGSAKTKSVPVTGLEMVAEDGAGFAGFAICGMGMEPHGPDFMARGDLSSLTPVPW QPGYGRVVCIGHVDGKPWPYDSRYVLQQQVERLSQRGWSLNTGLEPEFSLFKRDVTGSLQMVDASDNLDKPCYDYKGLSR SREFLERLTEALQPVGFDIYQIDHEDANGQFEINYTYSEAMESADRFTFFRMAAGEIANDMGMICSFMPKPDPKRAGNGM HFHLSIASASNKNLFHDASDPSGMGLSTLAYHFAAGLLAHGPALCAFAAPTVNSYKRLVVGNSLSGATWAPAFIAFGANN RSAMVRVPYGRLEFRLPDAGCNPYLVSAAIIAAGLDGIDRQLEIDHVCNENLYKLSLEEIAARGIKTLPQSLNEACDALQ ADPLFGEVLGSEIVDEFIRLKRMEWVEYSRHVSDWEVKRYIEFF >Mature_444_residues MLPPETQRLIEQHGIKYVLAQFVDIHGSAKTKSVPVTGLEMVAEDGAGFAGFAICGMGMEPHGPDFMARGDLSSLTPVPW QPGYGRVVCIGHVDGKPWPYDSRYVLQQQVERLSQRGWSLNTGLEPEFSLFKRDVTGSLQMVDASDNLDKPCYDYKGLSR SREFLERLTEALQPVGFDIYQIDHEDANGQFEINYTYSEAMESADRFTFFRMAAGEIANDMGMICSFMPKPDPKRAGNGM HFHLSIASASNKNLFHDASDPSGMGLSTLAYHFAAGLLAHGPALCAFAAPTVNSYKRLVVGNSLSGATWAPAFIAFGANN RSAMVRVPYGRLEFRLPDAGCNPYLVSAAIIAAGLDGIDRQLEIDHVCNENLYKLSLEEIAARGIKTLPQSLNEACDALQ ADPLFGEVLGSEIVDEFIRLKRMEWVEYSRHVSDWEVKRYIEFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family. Type 3 subfamily [H]
Homologues:
Organism=Homo sapiens, GI221307485, Length=442, Percent_Identity=23.7556561085973, Blast_Score=103, Evalue=4e-22, Organism=Escherichia coli, GI1790301, Length=473, Percent_Identity=28.7526427061311, Blast_Score=153, Evalue=2e-38, Organism=Escherichia coli, GI87081870, Length=464, Percent_Identity=28.0172413793103, Blast_Score=141, Evalue=1e-34,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR017536 [H]
Pfam domain/function: PF00120 Gln-synt_C [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 49134; Mature: 49134
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPPETQRLIEQHGIKYVLAQFVDIHGSAKTKSVPVTGLEMVAEDGAGFAGFAICGMGME CCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEHHHHCCCCCC PHGPDFMARGDLSSLTPVPWQPGYGRVVCIGHVDGKPWPYDSRYVLQQQVERLSQRGWSL CCCCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCC NTGLEPEFSLFKRDVTGSLQMVDASDNLDKPCYDYKGLSRSREFLERLTEALQPVGFDIY CCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCEEE QIDHEDANGQFEINYTYSEAMESADRFTFFRMAAGEIANDMGMICSFMPKPDPKRAGNGM EEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE HFHLSIASASNKNLFHDASDPSGMGLSTLAYHFAAGLLAHGPALCAFAAPTVNSYKRLVV EEEEEEECCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCHHEEECCCCHHCCCEEEE GNSLSGATWAPAFIAFGANNRSAMVRVPYGRLEFRLPDAGCNPYLVSAAIIAAGLDGIDR CCCCCCCCCCCEEEEECCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCC QLEIDHVCNENLYKLSLEEIAARGIKTLPQSLNEACDALQADPLFGEVLGSEIVDEFIRL EEEHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KRMEWVEYSRHVSDWEVKRYIEFF HHHHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure MLPPETQRLIEQHGIKYVLAQFVDIHGSAKTKSVPVTGLEMVAEDGAGFAGFAICGMGME CCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEHHHHCCCCCC PHGPDFMARGDLSSLTPVPWQPGYGRVVCIGHVDGKPWPYDSRYVLQQQVERLSQRGWSL CCCCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCC NTGLEPEFSLFKRDVTGSLQMVDASDNLDKPCYDYKGLSRSREFLERLTEALQPVGFDIY CCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCEEE QIDHEDANGQFEINYTYSEAMESADRFTFFRMAAGEIANDMGMICSFMPKPDPKRAGNGM EEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE HFHLSIASASNKNLFHDASDPSGMGLSTLAYHFAAGLLAHGPALCAFAAPTVNSYKRLVV EEEEEEECCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCHHEEECCCCHHCCCEEEE GNSLSGATWAPAFIAFGANNRSAMVRVPYGRLEFRLPDAGCNPYLVSAAIIAAGLDGIDR CCCCCCCCCCCEEEEECCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCC QLEIDHVCNENLYKLSLEEIAARGIKTLPQSLNEACDALQADPLFGEVLGSEIVDEFIRL EEEHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KRMEWVEYSRHVSDWEVKRYIEFF HHHHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1356885 [H]