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The map label for this gene is yrdA [C]

Identifier: 66045510

GI number: 66045510

Start: 2636007

End: 2636567

Strand: Direct

Name: yrdA [C]

Synonym: Psyr_2270

Alternate gene names: 66045510

Gene position: 2636007-2636567 (Clockwise)

Preceding gene: 66045509

Following gene: 66045511

Centisome position: 43.26

GC content: 56.86

Gene sequence:

>561_bases
GTGATCCGTAAAAATCCTTCCGGCCATCTGCCGGTCATTGCCGAGTCCGCCTACATCGATAAAACCGCGATCATCTGCGG
CAAGGTGATCATCAAGGACAACGTGTTTGTCGGCCCCTACGCCGTGATCCGCGCCGACGAAGTCGATGCCACCGGGGACA
TGGAACCGATCGTCATCGGTGCCAATTCCAACATCCAGGATGGCGTGGTGATCCATTCGAAATCAGGTGCTGCAGTCACC
ATCGGCGAGTTCACCTCGATTGCCCACCGCTCTATCGTGCACGGACCTTGCATAGTCGGAGATCGCGTGTTCATCGGTTT
CAATAGCGTGCTGTTCAATTGCCAGGTCGGCAAGGGCAGCGTGGTCAGGCACAATTCGGTGGTCGACGGTCGCGATTTGC
CGGAGCACTTCTATGTGCCGTCCACCACCCGGATCGGGTCGGGCACTGACCTTTCGCAATTTCCGCCGGTGAGCATTTCG
GCTTCGGAATTTTCCGAAGATGTGGCGCGCACCAACATTGATCTGGTACGCGGCTACAAGGCGCTTCAGAACGAGTTTTG
A

Upstream 100 bases:

>100_bases
GCTATGCAGCTTCCAGCGTCAGTGTCCGTCACTTTGAAAGCCTGCATCCGCACGATGCAGCCGCCCAGACTTCCAACTAC
CTGTCCTGAGGTTTCATTCC

Downstream 100 bases:

>100_bases
AGCGCTGCGCGCCAGCGGCAAGCGGCAAGTTATAAGCTGCAAGCTAGAGGCTAAAAGCTTGAAGCTTGAAGCTTTCCACT
TGCAGCTTGCAGCTTGCAGC

Product: hexapaptide repeat-containing transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MIRKNPSGHLPVIAESAYIDKTAIICGKVIIKDNVFVGPYAVIRADEVDATGDMEPIVIGANSNIQDGVVIHSKSGAAVT
IGEFTSIAHRSIVHGPCIVGDRVFIGFNSVLFNCQVGKGSVVRHNSVVDGRDLPEHFYVPSTTRIGSGTDLSQFPPVSIS
ASEFSEDVARTNIDLVRGYKALQNEF

Sequences:

>Translated_186_residues
MIRKNPSGHLPVIAESAYIDKTAIICGKVIIKDNVFVGPYAVIRADEVDATGDMEPIVIGANSNIQDGVVIHSKSGAAVT
IGEFTSIAHRSIVHGPCIVGDRVFIGFNSVLFNCQVGKGSVVRHNSVVDGRDLPEHFYVPSTTRIGSGTDLSQFPPVSIS
ASEFSEDVARTNIDLVRGYKALQNEF
>Mature_186_residues
MIRKNPSGHLPVIAESAYIDKTAIICGKVIIKDNVFVGPYAVIRADEVDATGDMEPIVIGANSNIQDGVVIHSKSGAAVT
IGEFTSIAHRSIVHGPCIVGDRVFIGFNSVLFNCQVGKGSVVRHNSVVDGRDLPEHFYVPSTTRIGSGTDLSQFPPVSIS
ASEFSEDVARTNIDLVRGYKALQNEF

Specific function: Reversible hydration of carbon dioxide. Essential to photosynthetic carbon dioxide fixation [H]

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=131, Percent_Identity=32.824427480916, Blast_Score=74, Evalue=4e-15,
Organism=Escherichia coli, GI87081681, Length=172, Percent_Identity=27.3255813953488, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1787667, Length=134, Percent_Identity=32.089552238806, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: =4.2.1.1 [H]

Molecular weight: Translated: 19926; Mature: 19926

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKNPSGHLPVIAESAYIDKTAIICGKVIIKDNVFVGPYAVIRADEVDATGDMEPIVIG
CCCCCCCCCCCEEECCCCCCCHHHEEEEEEEECCEEECCEEEEEECCCCCCCCCCEEEEC
ANSNIQDGVVIHSKSGAAVTIGEFTSIAHRSIVHGPCIVGDRVFIGFNSVLFNCQVGKGS
CCCCCCCCEEEECCCCCEEEEHHHHHHHHHHHCCCCEEECCEEEEEECEEEEEEECCCCC
VVRHNSVVDGRDLPEHFYVPSTTRIGSGTDLSQFPPVSISASEFSEDVARTNIDLVRGYK
EEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCHHHHHHHH
ALQNEF
HHHCCC
>Mature Secondary Structure
MIRKNPSGHLPVIAESAYIDKTAIICGKVIIKDNVFVGPYAVIRADEVDATGDMEPIVIG
CCCCCCCCCCCEEECCCCCCCHHHEEEEEEEECCEEECCEEEEEECCCCCCCCCCEEEEC
ANSNIQDGVVIHSKSGAAVTIGEFTSIAHRSIVHGPCIVGDRVFIGFNSVLFNCQVGKGS
CCCCCCCCEEEECCCCCEEEEHHHHHHHHHHHCCCCEEECCEEEEEECEEEEEEECCCCC
VVRHNSVVDGRDLPEHFYVPSTTRIGSGTDLSQFPPVSISASEFSEDVARTNIDLVRGYK
EEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCHHHHHHHH
ALQNEF
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041719; 8665839; 10924115 [H]